Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g024520.3 Solanum lycopersicum HOM05M006236 ORTHO05M007597 2.6e-225 784.3 392 100.0
Potri.003G163100 Populus trichocarpa HOM05M006236 ORTHO05M007597 6.4e-54 214.9 442 36.7
MBI07_g41898_MAGBIO Magnolia biondii HOM05M006236 ORTHO05M007597 1.6e-44 183.7 444 33.8
CDE05G1535 Ceratophyllum demersum HOM05M006236 ORTHO05M007597 7.3e-42 174.9 421 35.2
Potri.002G238100 Populus trichocarpa HOM05M006236 ORTHO05M007597 1.2e-39 167.5 445 33.0
CDE05G0540 Ceratophyllum demersum HOM05M006236 ORTHO05M007597 9.9e-39 164.5 418 35.4
Potri.014G143800 Populus trichocarpa HOM05M006236 ORTHO05M007597 3.8e-38 162.5 451 32.4
ATR0582G197 Amborella trichopoda HOM05M006236 ORTHO05M007597 1.9e-37 160.2 442 33.3
Ma03_g20480 Musa acuminata HOM05M006236 ORTHO05M007597 1.0e-35 154.5 445 33.3
AT5G13310 Arabidopsis thaliana HOM05M006236 ORTHO05M007597 1.7e-35 153.7 415 33.0
DDU049G0016 Dioscorea dumetorum HOM05M000117 ORTHO05M007597 3.9e-35 152.5 440 32.5
Spipo4G0063100 Spirodela polyrhiza HOM05M006236 ORTHO05M007597 1.1e-34 151.0 437 31.8
evm.TU.AsparagusV1_09.1496.V1.1 Asparagus officinalis HOM05M006236 ORTHO05M007597 7.3e-34 148.3 451 32.6
Zjn_sc00090.1.g00310.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM05M006236 ORTHO05M007597 1.1e-29 134.4 441 29.9
Glyma.16G047900 Glycine max HOM05M006236 ORTHO05M007597 1.4e-29 134.0 412 29.9
Glyma.19G103400 Glycine max HOM05M006236 ORTHO05M007597 1.2e-28 131.0 424 30.0
Asa8G04249 Allium sativum HOM05M006236 ORTHO05M007597 2.7e-28 129.8 437 31.8
Pahal.7G130600 Panicum hallii HOM05M006236 ORTHO05M007597 3.5e-28 129.4 416 30.8
Seita.7G079800 Setaria italica HOM05M006236 ORTHO05M007597 4.6e-28 129.0 440 30.5
GWHGAORA023212 Cenchrus purpureus HOM05M006236 ORTHO05M007597 6.0e-28 128.6 439 30.5
Solyc02g091940.3 Solanum lycopersicum HOM05M006236 ORTHO05M007597 1.7e-27 127.1 415 30.1
Zm00001eb084870 Zea mays B73 HOM05M006236 ORTHO05M007597 2.3e-27 126.7 439 28.9
Zm00007a00027019 Zea mays B104 HOM05M006236 ORTHO05M007597 2.3e-27 126.7 439 28.9
EJB05_38244 Eragrostis curvula HOM05M006236 ORTHO05M007597 5.1e-27 125.6 435 30.3
PH02Gene17416 Phyllostachys edulis HOM05M006236 ORTHO05M007597 8.7e-27 124.8 455 29.2
Misin12G062200 Miscanthus sinensis HOM05M006236 ORTHO05M007597 1.5e-26 124.0 381 29.9
Misin11G058100 Miscanthus sinensis HOM05M006236 ORTHO05M007597 1.9e-26 123.6 374 31.0
Sspon.05G0012400-1P Saccharum spontaneum HOM05M006236 ORTHO05M007597 4.3e-26 122.5 340 33.8
PH02Gene08965 Phyllostachys edulis HOM05M006236 ORTHO05M007597 7.4e-26 121.7 468 29.7
HPP92_027984 Vanilla planifolia HOM05M006236 ORTHO05M007597 7.4e-26 121.7 362 30.9
Bradi5g08610 Brachypodium distachyon HOM05M006236 ORTHO05M007597 9.6e-26 121.3 421 29.7
AT5G13970 Arabidopsis thaliana HOM05M006236 ORTHO05M007597 1.6e-25 120.6 429 31.5
Sobic.006G058300 Sorghum bicolor HOM05M006236 ORTHO05M007597 1.6e-25 120.6 339 33.0
Dexi7A01G0005090 Digitaria exilis HOM05M006236 ORTHO05M007597 2.1e-25 120.2 374 31.6
CALSI_Maker00025690 Calamus simplicifolius HOM05M006236 ORTHO05M007597 4.8e-25 119.0 319 34.2
GWHGAZTO078989 Oryza alta HOM05M006236 ORTHO05M007597 4.8e-25 119.0 297 36.7
Sspon.05G0012400-1A Saccharum spontaneum HOM05M006236 ORTHO05M007597 4.8e-25 119.0 330 33.3
Zm00001eb421370 Zea mays B73 HOM05M006236 ORTHO05M007597 4.8e-25 119.0 373 31.1
Zm00007a00014814 Zea mays B104 HOM05M006236 ORTHO05M007597 4.8e-25 119.0 373 31.1
Sspon.05G0012400-3C Saccharum spontaneum HOM05M006236 ORTHO05M007597 8.1e-25 118.2 334 32.9
GWHGAZTO029310 Oryza alta HOM05M006236 ORTHO05M007597 1.4e-24 117.5 297 36.7
Zosma05g09220 Zostera marina HOM05M006236 ORTHO05M007597 1.4e-24 117.5 452 31.2
Sspon.05G0012400-2B Saccharum spontaneum HOM05M006236 ORTHO05M007597 3.1e-24 116.3 334 32.6
Aco017808 Ananas comosus HOM05M006236 ORTHO05M007597 5.3e-24 115.5 460 28.7
OsKitaake04g111300 Oryza sativa Kitaake HOM05M006236 ORTHO05M007597 5.3e-24 115.5 319 35.7
Horvu_MOREX_2H01G424700 Hordeum vulgare HOM05M006236 ORTHO05M007597 2.0e-23 113.6 371 31.0
TraesCS2A03G0718300 Triticum aestivum HOM05M006236 ORTHO05M007597 9.9e-23 111.3 415 29.9
TRITD2Av1G174240 Triticum turgidum HOM05M006236 ORTHO05M007597 9.9e-23 111.3 415 29.9
TraesCS2B03G0796000 Triticum aestivum HOM05M006236 ORTHO05M007597 2.9e-22 109.8 298 34.6
TRIDC2BG044590 Triticum dicoccoides HOM05M006236 ORTHO05M007597 2.9e-22 109.8 298 34.6
TRITD2Bv1G143650 Triticum turgidum HOM05M006236 ORTHO05M007597 2.9e-22 109.8 298 34.6
GWHGASIY008666 Secale cereale HOM05M006236 ORTHO05M007597 8.4e-22 108.2 298 34.2
V3.Lp_chr2_0G14986 Lolium perenne HOM05M006236 ORTHO05M007597 2.4e-21 106.7 414 31.2
TraesCS2D03G0664000 Triticum aestivum HOM05M006236 ORTHO05M007597 4.2e-21 105.9 298 33.9
Zjn_sc00006.1.g04770.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM05M006236 ORTHO05M007597 4.2e-21 105.9 306 32.7
Sevir.7G086800 Setaria viridis HOM05M006236 ORTHO05M007597 1.1e-18 97.8 307 31.3
Ot_Chr6_g08757 Oropetium thomaeum HOM05M006236 ORTHO05M007597 1.1e-16 91.3 443 26.9
SMO117G0242 Selaginella moellendorffii HOM05M001587 ORTHO05M001569 1.8e-16 90.5 395 26.8
GWHGAORA061501 Cenchrus purpureus HOM05M006236 ORTHO05M007597 4.2e-13 79.3 259 31.7
TRIDC2AG041650 Triticum dicoccoides HOM05M006236 ORTHO05M007597 2.1e-12 77.0 275 30.9
Mapoly0001s0546 Marchantia polymorpha HOM05M006236 ORTHO05M007597 1.3e-11 74.3 188 35.6
OsR498G0408462300.01 Oryza sativa ssp. indica HOM05M006236 ORTHO05M007597 1.3e-11 74.3 256 32.4
HPP92_006450 Vanilla planifolia HOM05M006236 ORTHO05M007597 3.9e-11 72.8 253 32.8
OB04G18150 Oryza brachyantha HOM05M006236 ORTHO05M007597 8.7e-11 71.6 234 31.2
Dexi7B01G0006000 Digitaria exilis HOM05M006236 ORTHO05M007597 5.7e-10 68.9 341 26.7
AET2Gv20652500 Aegilops tauschii HOM05M006236 ORTHO05M007597 3.1e-08 63.2 233 30.9
Pp3c5_23700 Physcomitrium patens HOM05M006236 ORTHO05M007597 4.5e-07 59.3 317 24.9


User provided reference genes

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