Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g007090.1 Solanum lycopersicum HOM05M000007 ORTHO05M249116 3.3e-262 907.1 481 100.0
Solyc04g011960.2 Solanum lycopersicum HOM05M000082 ORTHO05M013016 3.2e-79 299.3 296 58.1
Solyc04g012010.3 Solanum lycopersicum HOM05M000082 ORTHO05M013016 1.8e-74 283.5 296 57.4
Solyc04g011990.3 Solanum lycopersicum HOM05M000007 ORTHO05M013016 3.2e-71 272.7 317 52.7
Solyc04g011980.1 Solanum lycopersicum HOM05M000082 ORTHO05M013016 3.3e-68 262.7 298 53.7
Solyc08g074250.3 Solanum lycopersicum HOM05M000082 ORTHO05M013016 5.8e-65 251.9 300 50.0
Solyc06g062440.4 Solanum lycopersicum HOM05M000007 ORTHO05M249977 8.4e-48 194.9 306 42.2
Solyc01g087200.3 Solanum lycopersicum HOM05M000007 ORTHO05M000337 1.2e-38 164.5 300 37.7
Solyc07g009180.1 Solanum lycopersicum HOM05M000007 ORTHO05M000337 2.3e-37 160.2 297 38.4
Solyc07g005770.2 Solanum lycopersicum HOM05M000082 ORTHO05M248091 1.0e-32 144.8 315 32.1
Solyc01g103610.4 Solanum lycopersicum HOM05M000007 ORTHO05M252029 8.7e-29 131.7 276 35.1
Solyc12g009450.3 Solanum lycopersicum HOM05M000007 ORTHO05M000337 5.0e-24 115.9 305 33.1
Solyc12g009460.1 Solanum lycopersicum HOM05M000082 ORTHO05M000337 5.0e-24 115.9 307 31.9
Solyc02g027080.2 Solanum lycopersicum HOM05M000007 ORTHO05M000337 5.5e-23 112.5 296 31.4
Solyc07g009190.1 Solanum lycopersicum HOM05M000007 ORTHO05M000337 1.2e-22 111.3 260 33.5
Solyc11g069020.3 Solanum lycopersicum HOM05M000007 ORTHO05M000337 6.1e-22 109.0 311 29.3
Solyc05g007170.3 Solanum lycopersicum HOM05M000007 ORTHO05M016214 1.0e-21 108.2 295 31.5
Solyc10g047320.2 Solanum lycopersicum HOM05M000007 ORTHO05M000337 1.0e-21 108.2 306 28.4
Solyc02g070410.2 Solanum lycopersicum HOM05M000007 ORTHO05M000337 3.9e-21 106.3 289 31.1
Solyc11g006530.3 Solanum lycopersicum HOM05M000082 ORTHO05M000337 7.4e-20 102.1 301 28.2
Solyc07g049700.1 Solanum lycopersicum HOM05M000007 ORTHO05M000337 8.2e-19 98.6 286 29.7
Solyc05g005130.3 Solanum lycopersicum HOM05M000007 ORTHO05M016214 1.8e-18 97.4 301 30.2
Solyc10g008240.3 Solanum lycopersicum HOM05M000007 ORTHO05M000337 2.4e-18 97.1 325 30.5
Solyc12g017800.3 Solanum lycopersicum HOM05M000082 ORTHO05M014028 5.3e-18 95.9 317 28.1
Solyc11g006640.3 Solanum lycopersicum HOM05M000082 ORTHO05M014028 9.0e-18 95.1 303 29.0
Solyc03g005660.4 Solanum lycopersicum HOM05M000007 ORTHO05M000337 1.5e-17 94.4 288 28.1
Solyc04g015220.4 Solanum lycopersicum HOM05M000007 ORTHO05M000337 2.2e-16 90.5 299 29.4
Solyc11g006630.1 Solanum lycopersicum HOM05M000007 ORTHO05M000337 2.2e-16 90.5 299 30.8
Solyc05g008070.4 Solanum lycopersicum HOM05M000007 ORTHO05M000337 3.8e-16 89.7 291 28.2
Solyc05g009740.1 Solanum lycopersicum HOM05M000007 ORTHO05M000337 3.8e-16 89.7 288 27.8
Solyc10g008220.4 Solanum lycopersicum HOM05M000007 ORTHO05M000337 3.8e-16 89.7 313 27.2
Solyc04g008205.1 Solanum lycopersicum HOM05M000007 ORTHO05M251515 1.1e-15 88.2 293 29.4
Solyc01g090430.3 Solanum lycopersicum HOM05M000007 ORTHO05M000337 1.4e-15 87.8 300 27.0
Solyc05g013250.3 Solanum lycopersicum HOM05M000007 ORTHO05M016214 1.2e-14 84.7 221 33.5
Solyc04g008120.3 Solanum lycopersicum HOM05M000007 ORTHO05M249961 4.6e-14 82.8 272 29.8
Solyc09g064680.3 Solanum lycopersicum HOM05M000007 ORTHO05M251017 6.1e-14 82.4 286 29.0
Solyc04g008170.1 Solanum lycopersicum HOM05M000007 ORTHO05M250344 1.0e-13 81.6 290 29.3
Solyc04g007070.3 Solanum lycopersicum HOM05M000007 ORTHO05M000337 1.4e-13 81.3 282 27.3
Solyc06g064680.1 Solanum lycopersicum HOM05M000007 ORTHO05M000337 1.8e-13 80.9 302 26.8
Solyc11g006520.2 Solanum lycopersicum HOM05M000007 ORTHO05M014028 1.8e-13 80.9 312 26.9
Solyc06g064750.1 Solanum lycopersicum HOM05M000007 ORTHO05M000337 1.1e-12 78.2 296 26.7
Solyc05g044490.3 Solanum lycopersicum HOM05M000007 ORTHO05M014142 2.5e-12 77.0 271 27.3
Solyc04g007060.4 Solanum lycopersicum HOM05M000007 ORTHO05M000337 3.3e-12 76.6 265 27.5
Solyc05g009750.1 Solanum lycopersicum HOM05M000007 ORTHO05M000337 5.7e-12 75.9 291 27.1
Solyc04g012000.1 Solanum lycopersicum HOM05M000082 ORTHO05M013016 7.4e-12 75.5 60 68.3
Solyc05g007640.3 Solanum lycopersicum HOM05M000007 ORTHO05M248953 6.3e-11 72.4 285 24.6
Solyc05g009760.3 Solanum lycopersicum HOM05M000007 ORTHO05M016214 6.3e-11 72.4 240 25.8
Solyc06g064720.1 Solanum lycopersicum HOM05M000007 ORTHO05M000337 8.2e-11 72.0 303 26.4
Solyc04g007030.4 Solanum lycopersicum HOM05M000007 ORTHO05M000337 6.9e-10 68.9 294 24.1
Solyc05g054340.4 Solanum lycopersicum HOM05M000007 ORTHO05M014142 1.0e-08 65.1 284 23.9
Glyma.14G199400 Glycine max HOM05M000082 ORTHO05M000337 1.3e-08 64.7 269 23.8
Solyc05g012740.2 Solanum lycopersicum HOM05M000007 ORTHO05M249625 1.7e-08 64.3 302 25.5
Solyc09g098100.4 Solanum lycopersicum HOM05M000007 ORTHO05M014142 1.7e-08 64.3 89 39.3
Solyc05g012900.4 Solanum lycopersicum HOM05M000007 ORTHO05M016214 2.9e-08 63.5 87 37.9
Solyc11g020100.3 Solanum lycopersicum HOM05M000007 ORTHO05M000337 5.0e-08 62.8 66 48.5
Solyc05g043420.2 Solanum lycopersicum HOM05M000007 ORTHO05M014142 1.1e-07 61.6 276 25.0
Solyc05g007350.3 Solanum lycopersicum HOM05M000007 ORTHO05M248214 2.5e-07 60.5 304 27.3
Solyc05g054020.3 Solanum lycopersicum HOM05M027451 ORTHO05M249489 2.5e-07 60.5 296 25.7
Glyma.08G259000 Glycine max HOM05M000082 ORTHO05M000337 5.5e-07 59.3 274 21.2
Solyc12g005970.1 Solanum lycopersicum HOM05M000082 ORTHO05M250702 5.5e-07 59.3 122 36.9


User provided reference genes

Program Settings