Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0126500 Oryza sativa ssp. japonica HOM05M000059 ORTHO05M030707 7.3e-78 293.1 156 100.0
OsKitaake11g121300 Oryza sativa Kitaake HOM05M000059 ORTHO05M010081 1.5e-46 189.1 158 62.7
GWHGAZTO075129 Oryza alta HOM05M000059 ORTHO05M000018 5.3e-20 100.9 46 89.1
OsR498G1120042900.01 Oryza sativa ssp. indica HOM05M000059 ORTHO05M000018 5.9e-19 97.4 47 85.1
V3.Lp_chr4_0G25482 Lolium perenne HOM05M000059 ORTHO05M010081 2.9e-18 95.1 85 56.5
GWHGAZTO042884 Oryza alta HOM05M000059 ORTHO05M010081 2.9e-18 95.1 73 82.2
TRITD6Av1G126620 Triticum turgidum HOM05M009081 ORTHO05M010081 2.5e-17 92.0 61 63.9
V3.Lp_chr4_0G27112 Lolium perenne HOM05M000059 ORTHO05M000018 4.2e-17 91.3 81 55.6
AET5Gv20773800 Aegilops tauschii HOM05M000059 ORTHO05M000018 5.5e-17 90.9 61 62.3
TRITD1Av1G210380 Triticum turgidum HOM05M000059 ORTHO05M010081 5.5e-17 90.9 128 42.2
TRITD4Av1G062760 Triticum turgidum HOM05M000059 ORTHO05M000018 5.5e-17 90.9 128 43.0
TRITD7Av1G199600 Triticum turgidum HOM05M000059 ORTHO05M000018 5.5e-17 90.9 129 41.9
TRIDC3AG064890 Triticum dicoccoides HOM05M000059 ORTHO05M000018 3.6e-16 88.2 83 53.0
AET3Gv20649900 Aegilops tauschii HOM05M000059 ORTHO05M000018 4.7e-16 87.8 80 53.8
Pahal.9G249000 Panicum hallii HOM05M017932 ORTHO05M019876 1.0e-15 86.7 138 43.5
V3.Lp_chr7_0.1G6720 Lolium perenne HOM05M000059 ORTHO05M000018 1.8e-15 85.9 81 53.1
TRITD6Av1G000740 Triticum turgidum HOM05M009081 ORTHO05M010081 3.0e-15 85.1 149 38.9
TRITD3Bv1G082860 Triticum turgidum HOM05M000059 ORTHO05M010081 1.2e-14 83.2 194 33.5
TRITD7Av1G028850 Triticum turgidum HOM05M009081 ORTHO05M010081 1.2e-14 83.2 149 38.9
TraesCS7D03G0849200 Triticum aestivum HOM05M009081 ORTHO05M010081 1.5e-14 82.8 141 38.3
TRITD5Av1G258490 Triticum turgidum HOM05M000059 ORTHO05M003433 1.5e-14 82.8 149 38.9
TRITD2Av1G223450 Triticum turgidum HOM05M000059 ORTHO05M000018 2.6e-14 82.0 89 48.3
Sspon.07G0032700-1C Saccharum spontaneum HOM05M009955 ORTHO05M012737 3.4e-14 81.6 79 54.4
TRITD6Bv1G077340 Triticum turgidum HOM05M009081 ORTHO05M010081 7.5e-14 80.5 142 38.0
TRITD4Av1G126380 Triticum turgidum HOM05M000059 ORTHO05M010081 9.8e-14 80.1 121 39.7
EJB05_44356 Eragrostis curvula HOM05M009081 ORTHO05M010081 2.8e-13 78.6 140 35.0
GWHGAZTO091597 Oryza alta HOM05M000387 ORTHO05M004875 2.8e-13 78.6 76 72.4
V3.Lp_chr6_0G14306 Lolium perenne HOM05M000059 ORTHO05M000018 4.8e-13 77.8 46 67.4
AET4Gv20611200 Aegilops tauschii HOM05M000059 ORTHO05M000018 1.1e-12 76.6 80 51.2
Pahal.9G340700 Panicum hallii HOM05M019069 ORTHO05M022557 4.1e-12 74.7 169 34.9
AET5Gv21059200 Aegilops tauschii HOM05M000059 ORTHO05M000018 5.4e-12 74.3 46 63.0
EJB05_29708 Eragrostis curvula HOM05M009081 ORTHO05M010081 1.2e-11 73.2 83 44.6
EJB05_10157 Eragrostis curvula HOM05M009081 ORTHO05M010081 1.6e-11 72.8 82 45.1
GWHGAZTO037787 Oryza alta HOM05M000059 ORTHO05M000018 5.9e-11 70.9 56 53.6
OsR498G0203777800.01 Oryza sativa ssp. indica HOM05M000059 ORTHO05M000018 1.0e-10 70.1 71 49.3
OsR498G0815745200.01 Oryza sativa ssp. indica HOM05M000059 ORTHO05M000018 1.7e-10 69.3 139 36.0
GWHGASIY024269 Secale cereale HOM05M000059 ORTHO05M010081 1.7e-10 69.3 138 34.8
AET2Gv20151900 Aegilops tauschii HOM05M000059 ORTHO05M000018 7.2e-09 63.9 137 32.8
AET4Gv20308900 Aegilops tauschii HOM05M000059 ORTHO05M000018 2.1e-08 62.4 46 54.3
Pahal.9G417300 Panicum hallii HOM05M018532 ORTHO05M010081 4.7e-08 61.2 61 45.9
GWHGAZTO094400 Oryza alta HOM05M000059 ORTHO05M010081 6.1e-08 60.8 48 50.0
TRITD2Av1G264510 Triticum turgidum HOM05M000059 ORTHO05M000018 5.2e-07 57.8 140 31.4
TRIDC5AG018310 Triticum dicoccoides HOM05M000059 ORTHO05M000018 6.8e-07 57.4 36 63.9
GWHGAZTO030845 Oryza alta HOM05M013435 ORTHO05M025427 2.0e-06 55.8 119 37.0
OsR498G0917315900.01 Oryza sativa ssp. indica HOM05M000059 ORTHO05M000018 2.0e-06 55.8 169 29.6
Ot_Chr1_gn31217 Oropetium thomaeum HOM05M019586 ORTHO05M151683 5.7e-06 54.3 87 46.0


User provided reference genes

Program Settings