Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Misin08G127600 Miscanthus sinensis HOM05M003102 ORTHO05M003542 2.7e-132 474.6 239 100.0
Sevir.1G145532 Setaria viridis HOM05M003102 ORTHO05M003542 2.3e-99 365.2 276 72.8
Ot_Un161_gn40316 Oropetium thomaeum HOM05M003102 ORTHO05M003542 3.1e-96 354.8 273 73.3
Ot_Un163_g28430 Oropetium thomaeum HOM05M003102 ORTHO05M003542 3.1e-96 354.8 273 73.3
Ot_Un165_gn40482 Oropetium thomaeum HOM05M003102 ORTHO05M003542 3.1e-96 354.8 273 73.3
GWHGAORA065246 Cenchrus purpureus HOM05M003102 ORTHO05M003542 1.2e-95 352.8 258 73.6
OsKitaake01g357500 Oryza sativa Kitaake HOM05M003102 ORTHO05M003542 1.1e-93 346.3 284 70.1
OsR498G0611904800.01 Oryza sativa ssp. indica HOM05M003102 ORTHO05M003542 1.1e-93 346.3 284 70.1
Zm00007a00014261 Zea mays B104 HOM05M003102 ORTHO05M003542 8.9e-91 336.7 262 72.5
TRITD1Bv1G017030 Triticum turgidum HOM05M003102 ORTHO05M003542 7.5e-90 333.6 256 72.3
Seita.J009300 Setaria italica HOM05M003102 ORTHO05M003542 3.7e-89 331.3 276 67.8
GWHGASIY035568 Secale cereale HOM05M003102 ORTHO05M003542 4.9e-89 330.9 273 67.8
Ot_Un166_gn40494 Oropetium thomaeum HOM05M003102 ORTHO05M003542 6.4e-89 330.5 244 75.4
GWHGAZTO094676 Oryza alta HOM05M003102 ORTHO05M003542 1.1e-88 329.7 262 71.8
Horvu_MOREX_Un01G030500 Hordeum vulgare HOM05M003102 ORTHO05M003542 2.0e-87 325.5 255 70.2
Asa1G00744 Allium sativum HOM05M003102 ORTHO05M003542 7.8e-87 323.6 255 71.0
TraesCS7B03G1233200 Triticum aestivum HOM05M003102 ORTHO05M003542 1.0e-86 323.2 255 70.6
TRITD1Bv1G017100 Triticum turgidum HOM05M003102 ORTHO05M003542 1.0e-86 323.2 256 69.9
TRITD2Av1G081580 Triticum turgidum HOM05M003102 ORTHO05M003542 1.0e-86 323.2 255 69.8
AET0Gv20033100 Aegilops tauschii HOM05M003102 ORTHO05M003542 5.0e-86 320.9 255 69.0
AET0Gv20092900 Aegilops tauschii HOM05M003102 ORTHO05M003542 5.0e-86 320.9 255 69.0
AET0Gv20093000 Aegilops tauschii HOM05M003102 ORTHO05M003542 5.0e-86 320.9 255 69.0
AET2Gv20478500 Aegilops tauschii HOM05M003102 ORTHO05M003542 5.0e-86 320.9 255 69.0
AET3Gv20195900 Aegilops tauschii HOM05M003102 ORTHO05M003542 5.0e-86 320.9 255 69.0
AET3Gv20245000 Aegilops tauschii HOM05M003102 ORTHO05M003542 5.0e-86 320.9 255 69.0
GWHGASIY020564 Secale cereale HOM05M003102 ORTHO05M003542 5.0e-86 320.9 273 65.6
TraesCS6B03G0330000 Triticum aestivum HOM05M003102 ORTHO05M003542 6.6e-86 320.5 255 69.8
TRITD1Bv1G187830 Triticum turgidum HOM05M003102 ORTHO05M003542 9.5e-85 316.6 255 69.0
TraesCS1B03G0965100 Triticum aestivum HOM05M003102 ORTHO05M003542 1.2e-84 316.2 255 69.8
TraesCS7A03G0230000 Triticum aestivum HOM05M003102 ORTHO05M003542 1.6e-84 315.8 255 68.6
TRITD7Av1G028380 Triticum turgidum HOM05M003102 ORTHO05M003542 1.6e-84 315.8 255 68.6
TraesCS7B03G1348200 Triticum aestivum HOM05M003102 ORTHO05M003542 2.1e-84 315.5 255 69.0
TraesCS5B03G1384900 Triticum aestivum HOM05M003102 ORTHO05M003542 3.6e-84 314.7 255 68.6
TraesCS1B03G0161300 Triticum aestivum HOM05M003102 ORTHO05M003542 2.0e-82 308.9 256 67.6
TRITD2Bv1G203970 Triticum turgidum HOM05M003102 ORTHO05M003542 2.0e-82 308.9 255 67.5
mito3_g00080 Musa acuminata HOM05M003102 ORTHO05M003542 5.8e-82 307.4 256 67.6
Zosma1407g00020 Zostera marina HOM05M003102 ORTHO05M003542 3.7e-81 304.7 267 64.4
Zosma52g00070 Zostera marina HOM05M003102 ORTHO05M003542 3.7e-81 304.7 267 64.4
Zosma52g00290 Zostera marina HOM05M003102 ORTHO05M003542 3.7e-81 304.7 267 64.4
Zosma838g00120 Zostera marina HOM05M003102 ORTHO05M003542 3.7e-81 304.7 267 64.4
Zosma848g00140 Zostera marina HOM05M003102 ORTHO05M003542 3.7e-81 304.7 267 64.4
Horvu_MOREX_3H01G484200 Hordeum vulgare HOM05M003102 ORTHO05M003542 8.3e-81 303.5 226 74.3
ATMG01170 Arabidopsis thaliana HOM05M003102 ORTHO05M003542 5.4e-80 300.8 271 63.8
AT2G07741 Arabidopsis thaliana HOM05M003102 ORTHO05M003542 1.6e-79 299.3 253 66.4
ATMG00410 Arabidopsis thaliana HOM05M003102 ORTHO05M003542 1.6e-79 299.3 253 66.4
TRITD1Av1G175810 Triticum turgidum HOM05M003102 ORTHO05M003542 1.0e-78 296.6 226 73.0
GWHGASIY023265 Secale cereale HOM05M003102 ORTHO05M003542 2.3e-78 295.4 224 72.8
AET0Gv20092800 Aegilops tauschii HOM05M003102 ORTHO05M003542 3.0e-78 295.0 226 72.6
AET4Gv20296900 Aegilops tauschii HOM05M003102 ORTHO05M003542 1.5e-77 292.7 226 72.6
TRITD1Bv1G156000 Triticum turgidum HOM05M003102 ORTHO05M003542 7.3e-77 290.4 226 71.7
Horvu_MOREX_3H01G325700 Hordeum vulgare HOM05M003102 ORTHO05M003542 1.8e-75 285.8 226 69.9
TRITD4Bv1G144070 Triticum turgidum HOM05M003102 ORTHO05M003542 7.5e-74 280.4 206 73.8
Zosma1469g00110 Zostera marina HOM05M003102 ORTHO05M003542 5.4e-72 274.2 242 64.5
TRITD6Bv1G107950 Triticum turgidum HOM05M003102 ORTHO05M003542 1.6e-71 272.7 226 67.7
TRITD6Bv1G076640 Triticum turgidum HOM05M003102 ORTHO05M003542 4.6e-71 271.2 204 71.6
Misin08G128800 Miscanthus sinensis HOM05M003102 ORTHO05M003542 6.0e-71 270.8 249 64.3
Asa5G03566 Allium sativum HOM05M003102 ORTHO05M003542 7.3e-69 263.8 230 65.7
SEGI_16408 Sequoiadendron giganteum HOM05M003102 ORTHO05M003542 8.4e-65 250.4 254 60.2
SEGI_09870 Sequoiadendron giganteum HOM05M003102 ORTHO05M003542 1.9e-64 249.2 254 60.2
SEGI_38071 Sequoiadendron giganteum HOM05M003102 ORTHO05M003542 2.7e-63 245.4 251 60.2
TRITD5Bv1G253170 Triticum turgidum HOM05M003102 ORTHO05M003542 7.3e-61 237.3 205 66.8
AET2Gv20551100 Aegilops tauschii HOM05M003102 ORTHO05M003542 6.9e-59 230.7 186 68.8
SEGI_30085 Sequoiadendron giganteum HOM05M003102 ORTHO05M003542 5.4e-56 221.1 224 61.2
AET7Gv21169800 Aegilops tauschii HOM05M003102 ORTHO05M003542 2.2e-49 199.1 140 77.1
TRIDC1AG042290 Triticum dicoccoides HOM05M003102 ORTHO05M003542 1.1e-48 196.8 216 54.2
TRIDC1BG066800 Triticum dicoccoides HOM05M003102 ORTHO05M003542 1.1e-48 196.8 216 55.1
AET2Gv21303800 Aegilops tauschii HOM05M003102 ORTHO05M003542 2.4e-48 195.7 216 53.7
AET4Gv20381600 Aegilops tauschii HOM05M003102 ORTHO05M003542 2.4e-48 195.7 216 53.7
TRIDC6AG012580 Triticum dicoccoides HOM05M003102 ORTHO05M003542 2.4e-48 195.7 216 54.6
TRIDC6BG018720 Triticum dicoccoides HOM05M003102 ORTHO05M003542 2.4e-48 195.7 216 54.6
TRITD3Bv1G250710 Triticum turgidum HOM05M003102 ORTHO05M003542 3.2e-48 195.3 140 76.4
TRIDC3BG080390 Triticum dicoccoides HOM05M003102 ORTHO05M003542 4.2e-48 194.9 216 54.6
TRIDC5BG016010 Triticum dicoccoides HOM05M003102 ORTHO05M003542 5.4e-48 194.5 216 54.2
AET4Gv20381700 Aegilops tauschii HOM05M003102 ORTHO05M003542 9.3e-48 193.7 140 75.0
TRIDC7BG074850 Triticum dicoccoides HOM05M003102 ORTHO05M003542 1.0e-46 190.3 216 53.7
TRITD7Bv1G017490 Triticum turgidum HOM05M003102 ORTHO05M003542 1.0e-46 190.3 140 74.3
TRIDC7AG072230 Triticum dicoccoides HOM05M003102 ORTHO05M003542 7.4e-45 184.1 215 53.0
TRITD5Bv1G045810 Triticum turgidum HOM05M003102 ORTHO05M003542 1.1e-40 170.2 145 64.8
AET2Gv20081900 Aegilops tauschii HOM05M003102 ORTHO05M003542 1.4e-40 169.9 187 55.6
TraesCS6A03G0257200 Triticum aestivum HOM05M003102 ORTHO05M003542 1.9e-40 169.5 188 55.3
TRIDC2AG039080 Triticum dicoccoides HOM05M003102 ORTHO05M003542 1.9e-40 169.5 190 55.3
AET1Gv20399800 Aegilops tauschii HOM05M003102 ORTHO05M003542 9.3e-40 167.2 149 61.1
TRIDC2BG062860 Triticum dicoccoides HOM05M003102 ORTHO05M003542 1.2e-39 166.8 187 55.1
TraesCS7A03G0460000 Triticum aestivum HOM05M003102 ORTHO05M003542 2.7e-39 165.6 187 55.1
TRIDC5BG084310 Triticum dicoccoides HOM05M003102 ORTHO05M003542 2.7e-39 165.6 187 54.5
AET7Gv20709200 Aegilops tauschii HOM05M003102 ORTHO05M003542 7.9e-39 164.1 187 53.5
TRIDC1AG063280 Triticum dicoccoides HOM05M003102 ORTHO05M003542 2.5e-37 159.1 167 56.3
TRIDC2AG027760 Triticum dicoccoides HOM05M003102 ORTHO05M003542 2.5e-37 159.1 167 56.3
Os12g0424180 Oryza sativa ssp. japonica HOM05M003102 ORTHO05M003542 1.6e-36 156.4 146 64.4
TRIDC4BG041910 Triticum dicoccoides HOM05M003102 ORTHO05M003542 3.7e-36 155.2 187 51.9
Misin06G241100 Miscanthus sinensis HOM05M003102 ORTHO05M003542 1.4e-35 153.3 102 81.4
TRIDC7AG024820 Triticum dicoccoides HOM05M003102 ORTHO05M003542 5.3e-35 151.4 167 53.9
TRIDC6BG029660 Triticum dicoccoides HOM05M003102 ORTHO05M003542 6.9e-35 151.0 165 54.5
Asa5G05578 Allium sativum HOM05M003102 ORTHO05M003542 3.4e-34 148.7 111 72.1
GWHGAORA012832 Cenchrus purpureus HOM05M003102 ORTHO05M003542 6.5e-33 144.4 82 91.5
Asa5G06069 Allium sativum HOM05M003102 ORTHO05M003542 4.2e-32 141.7 125 62.4
Misin01G468300 Miscanthus sinensis HOM05M003102 ORTHO05M003542 7.1e-32 141.0 111 72.1
V3.Lp_chr3_0G16984 Lolium perenne HOM05M003102 ORTHO05M003542 2.3e-30 136.0 101 76.2
Zosma360g00140 Zostera marina HOM05M003102 ORTHO05M003542 1.3e-28 130.2 102 66.7
Zosma372g00090 Zostera marina HOM05M003102 ORTHO05M003542 1.3e-28 130.2 102 66.7
Glyma.16G133700 Glycine max HOM05M003102 ORTHO05M003542 1.4e-24 116.7 71 83.1
Aco022603 Ananas comosus HOM05M003102 ORTHO05M003542 1.2e-23 113.6 74 81.1
Aco031847 Ananas comosus HOM05M003102 ORTHO05M003542 1.2e-23 113.6 74 81.1
SMO053G0007 Selaginella moellendorffii HOM05M003102 ORTHO05M003542 7.9e-23 110.9 250 38.4
Bradi1g32886 Brachypodium distachyon HOM05M003102 ORTHO05M003542 4.3e-21 105.1 60 90.0
Ot_Un4_gn40976 Oropetium thomaeum HOM05M003102 ORTHO05M003542 1.4e-19 100.1 255 29.8
Glyma.01G103450 Glycine max HOM05M003102 ORTHO05M003542 3.1e-19 99.0 74 74.3
Potri.014G168000 Populus trichocarpa HOM05M003102 ORTHO05M003542 4.1e-19 98.6 95 57.9
AET5Gv20676800 Aegilops tauschii HOM05M003102 ORTHO05M003542 1.3e-17 93.6 55 80.0
ATR0392G001 Amborella trichopoda HOM05M003102 ORTHO05M003542 6.7e-14 81.3 77 59.7
Ot_Un6_gn41086 Oropetium thomaeum HOM05M003102 ORTHO05M003542 3.3e-13 79.0 153 36.6
Ot_Un164_gn40395 Oropetium thomaeum HOM05M003102 ORTHO05M003542 1.3e-09 67.0 47 76.6
Zm00007a00041459 Zea mays B104 HOM05M011809 ORTHO05M012932 1.1e-08 63.9 41 82.9
Zm00007a00014859 Zea mays B104 HOM05M002412 ORTHO05M002404 2.5e-08 62.8 46 80.4
Zm00007a00014871 Zea mays B104 HOM05M002412 ORTHO05M002404 2.5e-08 62.8 46 80.4
Zm00007a00011666 Zea mays B104 HOM05M002412 ORTHO05M271784 5.5e-08 61.6 45 80.0
TRIDC7BG026770 Triticum dicoccoides HOM05M003102 ORTHO05M003542 7.9e-07 57.8 64 53.1


User provided reference genes

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