Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Misin08G096800 Miscanthus sinensis HOM05M008943 ORTHO05M004551 7.9e-41 169.1 77 100.0
Misin08G097000 Miscanthus sinensis HOM05M008943 ORTHO05M004551 4.8e-38 159.8 77 94.8
Sobic.004G075351 Sorghum bicolor HOM05M008943 ORTHO05M004551 6.9e-29 129.4 77 79.2
Misin08G097300 Miscanthus sinensis HOM05M008943 ORTHO05M004551 2.9e-19 97.4 80 60.0
Misin08G097100 Miscanthus sinensis HOM05M008943 ORTHO05M004551 1.4e-18 95.1 86 53.5
Misin08G096900 Miscanthus sinensis HOM05M008943 ORTHO05M004551 2.7e-17 90.9 87 54.0
Misin07G072500 Miscanthus sinensis HOM05M008943 ORTHO05M004551 1.0e-16 89.0 86 52.3
Sobic.004G075400 Sorghum bicolor HOM05M008943 ORTHO05M004551 1.4e-16 88.6 87 52.9
Misin07G072600 Miscanthus sinensis HOM05M008943 ORTHO05M004551 1.8e-16 88.2 83 60.2
TraesCS7A03G1178200 Triticum aestivum HOM05M008943 ORTHO05M004551 5.1e-16 86.7 84 57.1
Sspon.04G0016170-1A Saccharum spontaneum HOM05M008943 ORTHO05M004551 2.6e-15 84.3 84 52.4
TraesCS7D03G1116200 Triticum aestivum HOM05M008943 ORTHO05M004551 1.7e-14 81.6 83 55.4
TraesCS7B03G1040000 Triticum aestivum HOM05M008943 ORTHO05M004551 4.8e-14 80.1 83 53.0
TraesCS7B03G1199400 Triticum aestivum HOM05M008943 ORTHO05M004551 4.8e-14 80.1 84 50.0
TraesCS7D03G1120200 Triticum aestivum HOM05M008943 ORTHO05M004551 4.8e-14 80.1 84 53.6
TraesCS7A03G1175200 Triticum aestivum HOM05M008943 ORTHO05M004551 6.3e-14 79.7 86 51.2
TraesCS7D03G1115900 Triticum aestivum HOM05M008943 ORTHO05M004551 6.3e-14 79.7 83 50.6
TraesCS7B03G1048900 Triticum aestivum HOM05M008943 ORTHO05M004551 8.2e-14 79.3 84 53.6
TraesCS7A03G1174800 Triticum aestivum HOM05M008943 ORTHO05M004551 1.1e-13 79.0 86 50.0
EJB05_26029 Eragrostis curvula HOM05M008943 ORTHO05M004551 1.8e-13 78.2 87 48.3
EJB05_57151 Eragrostis curvula HOM05M008943 ORTHO05M004551 1.8e-13 78.2 87 48.3
Sobic.004G075301 Sorghum bicolor HOM05M008943 ORTHO05M004551 1.8e-13 78.2 84 51.2
Sobic.004G072950 Sorghum bicolor HOM05M008943 ORTHO05M004551 3.1e-13 77.4 80 53.8
Sobic.004G075550 Sorghum bicolor HOM05M008943 ORTHO05M004551 4.1e-13 77.0 87 48.3
TraesCS7B03G1252900 Triticum aestivum HOM05M008943 ORTHO05M004551 5.3e-13 76.6 84 48.8
TraesCS7D03G1114000 Triticum aestivum HOM05M008943 ORTHO05M004551 9.1e-13 75.9 82 50.0
Sspon.04G0028110-2D Saccharum spontaneum HOM05M008943 ORTHO05M004551 1.6e-12 75.1 79 53.2
TraesCS7A03G1168500 Triticum aestivum HOM05M008943 ORTHO05M004551 2.2e-11 71.2 81 49.4
Ot_Chr7_g13257 Oropetium thomaeum HOM05M007350 ORTHO05M009628 2.9e-11 70.9 79 45.6
TraesCS7B03G1040800 Triticum aestivum HOM05M008943 ORTHO05M004551 6.5e-11 69.7 83 50.6
Sspon.04G0028110-1B Saccharum spontaneum HOM05M008943 ORTHO05M004551 2.5e-10 67.8 74 51.4
TraesCS7D03G1116500 Triticum aestivum HOM05M008943 ORTHO05M004551 4.2e-10 67.0 81 53.1
TraesCS2D03G0344000 Triticum aestivum HOM05M008943 ORTHO05M004551 7.2e-10 66.2 86 48.8
Pahal.6G286600 Panicum hallii HOM05M007350 ORTHO05M009628 1.6e-09 65.1 81 43.2
Ot_Chr7_g13256 Oropetium thomaeum HOM05M007350 ORTHO05M009628 6.1e-09 63.2 79 46.8
GWHGAORA035170 Cenchrus purpureus HOM05M007350 ORTHO05M009628 8.0e-09 62.8 72 43.1
Dexi8A01G0014220 Digitaria exilis HOM05M005956 ORTHO05M009628 8.0e-09 62.8 74 37.8
Ot_Chr7_gn38195 Oropetium thomaeum HOM05M007350 ORTHO05M009628 4.0e-08 60.5 80 43.8
Ot_Chr7_gn38196 Oropetium thomaeum HOM05M007350 ORTHO05M009628 4.0e-08 60.5 83 37.3
Seita.3G341800 Setaria italica HOM05M007350 ORTHO05M009628 4.0e-08 60.5 79 40.5
Seita.3G341700 Setaria italica HOM05M007350 ORTHO05M009628 2.6e-07 57.8 79 38.0
Sevir.3G356600 Setaria viridis HOM05M007350 ORTHO05M009628 2.6e-07 57.8 79 38.0
Sobic.005G196400 Sorghum bicolor HOM05M007350 ORTHO05M009628 7.5e-07 56.2 77 40.3
Dexi2A01G0003030 Digitaria exilis HOM05M007350 ORTHO05M009628 9.7e-07 55.8 52 48.1
Sspon.02G0021750-2B Saccharum spontaneum HOM05M007350 ORTHO05M009628 3.7e-06 53.9 79 40.5
Sspon.02G0021750-1A Saccharum spontaneum HOM05M007350 ORTHO05M009628 8.2e-06 52.8 79 39.2


User provided reference genes

Program Settings