Gene: Solyc07g005890.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc07g005890.3
  • Transcript Identifier Solyc07g005890.3.1
  • Gene Type Coding gene
  • Location SL4.0ch07 : 712427-720470 : negative

Gene Family Information

  • ID HOM05D005567
  • #Genes/#Species 138/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc07g005890.3.1
  • uniprot A0A3Q7H2U8
  • gene_id Solyc07g005890

Descriptions

  • Description DEAD-box ATP-dependent RNA helicase 1 (AHRD V3.3 *** A0A2G2WAM1_CAPBA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0017151
ISO
PLAZA Integrative OrthologyDEAD/H-box RNA helicase binding AT4G15850

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR001650 Helicase, C-terminal
IPR011545 DEAD/DEAH box helicase domain
Mapman id Description
35.1 not assigned.annotated