Gene: SGA_v2.0_scaffold274G46519

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold274G46519
  • Transcript Identifier SGA_v2.0_scaffold274T46519
  • Gene Type Coding gene
  • Location scaffold274 : 402585-407967 : negative

Gene Family Information

  • ID HOM05D003387
  • #Genes/#Species 202/90
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product Polypyrimidine tract-binding protein-like protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006417
ISO
PLAZA Integrative Orthologyregulation of translation AT1G43190
GO:0043484
ISO
PLAZA Integrative Orthologyregulation of RNA splicing AT1G43190

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G43190

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G43190
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G43190
GO:0000932
ISO
PLAZA Integrative OrthologyP-body AT1G43190

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR021790 PTBP1, RNA recognition motif 2-like
IPR000504 RNA recognition motif domain
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 RNA-binding domain superfamily
IPR034797 PTBPH3, RNA recognition motif 3
Mapman id Description
35.1 not assigned.annotated