Gene: SGA_v2.0_scaffold1G00416

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold1G00416
  • Transcript Identifier SGA_v2.0_scaffold1T00416
  • Gene Type Coding gene
  • Location scaffold1 : 3085493-3088147 : positive

Gene Family Information

  • ID HOM05D000548
  • #Genes/#Species 997/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product Zinc finger family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
InterProprotein ubiquitination
GO:1901485
ISO
PLAZA Integrative Orthologypositive regulation of transcription factor catabolic process AT5G18650
GO:1900425
ISO
PLAZA Integrative Orthologynegative regulation of defense response to bacterium AT5G18650

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
InterProzinc ion binding
GO:0004842
ISO
PLAZA Integrative Orthologyubiquitin-protein transferase activity AT5G18650
GO:0008134
ISO
PLAZA Integrative Orthologytranscription factor binding AT5G18650

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G18650
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G18650

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR037275 Zinc finger, CTCHY-type superfamily
IPR008913 Zinc finger, CHY-type
IPR001841 Zinc finger, RING-type
IPR037274 Zinc finger, CHY-type superfamily
IPR039512 RCHY1, zinc-ribbon
IPR031109 Ring finger and CHY zinc finger domain-containing protein, plant
Mapman id Description
35.1 not assigned.annotated