Gene: SGA_v2.0_scaffold171G38881
General Information
Structural Information
- Species Striga asiatica
- Gene Identifier SGA_v2.0_scaffold171G38881
- Transcript Identifier SGA_v2.0_scaffold171T38881
- Gene Type Coding gene
- Location scaffold171 : 236127-245990 : positive
Gene Family Information
- ID HOM05D003514
- #Genes/#Species 194/97
- Phylogenetic origin
- ID ORTHO05D004280
- #Genes/#Species 185/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
Descriptions
- product Mitochondrial import inner membrane translocase subunit TIM50
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042138 | IEA | InterPro | meiotic DNA double-strand break formation | |
| GO:0006259 | IEA | InterPro | DNA metabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003918 | IEA | InterPro | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | |
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0005524 | IEA | InterPro | ATP binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005694 | IEA | InterPro | chromosome | |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT1G55900 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036388 | Winged helix-like DNA-binding domain superfamily |
| IPR002815 | Spo11/DNA topoisomerase VI subunit A |
| IPR013049 | Spo11/DNA topoisomerase VI, subunit A, N-terminal |
| IPR036078 | Spo11/DNA topoisomerase VI subunit A superfamily |
| IPR004274 | FCP1 homology domain |
| IPR036412 | HAD-like superfamily |
| IPR023214 | HAD superfamily |
| IPR034136 | Topoisomerase 6 subunit A/Spo11, TOPRIM domain |
| Mapman id | Description |
|---|---|
| 18.4.26.1.4 | Protein modification.phosphorylation.protein aspartate phosphatase superfamily.FCP phosphatase families.subcluster G phosphatase |
| 23.2.3.7 | Protein translocation.mitochondrion.inner mitochondrion membrane TIM translocation system.phosphatase component Tim50 |