Gene: SGA_v2.0_scaffold100G29556
General Information
Structural Information
- Species Striga asiatica
- Gene Identifier SGA_v2.0_scaffold100G29556
- Transcript Identifier SGA_v2.0_scaffold100T29556
- Gene Type Coding gene
- Location scaffold100 : 202905-210396 : negative
Gene Family Information
- ID HOM05D001195
- #Genes/#Species 523/97
- Phylogenetic origin
- ID ORTHO05D001138
- #Genes/#Species 477/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
Descriptions
- product Replication factor C / DNA polymerase III gamma-tau subunit, putative
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006260 | IEA | InterPro | DNA replication | |
| GO:0022900 | IEA | InterPro | electron transport chain | |
| GO:0010091 | ISO | PLAZA Integrative Orthology | trichome branching | AT2G02480 |
| GO:0010026 | ISO | PLAZA Integrative Orthology | trichome differentiation | AT2G02480 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003887 | IEA | InterPro | DNA-directed DNA polymerase activity | |
| GO:0005524 | IEA | InterPro | ATP binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009360 | IEA | InterPro | DNA polymerase III complex | |
| GO:0005739 | IEA | InterPro | mitochondrion | |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT1G14460 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR008921 | DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal |
| IPR022754 | DNA polymerase III, gamma subunit, domain III |
| IPR045085 | DNA polymerase III, subunit gamma/tau, helical lid domain |
| IPR012763 | DNA polymerase III, subunit gamma/ tau, N-terminal |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR012576 | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 |
| Mapman id | Description |
|---|---|
| 2.4.1.4.2.3 | Cellular respiration.oxidative phosphorylation.NADH dehydrogenase complex.non-core modules.beta subcomplex.component NDUFB3 |