Gene: AT3G61050

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G61050
  • Transcript Identifier AT3G61050.1
  • Gene Type Coding gene
  • Location Chr3 : 22597485-22600932 : positive

Gene Family Information

Gene Duplication Information

Labels

Identifiers

  • tid AT3G61050.1
  • symbol NTMC2T4
  • uniprot Q9LEX1

Descriptions

  • Description Calcium-dependent lipid-binding (CaLB domain) family protein
  • Computational description NTMC2T4; FUNCTIONS IN: lipid binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: male gametophyte, cultured cell, callus, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 region (InterPro:IPR020477), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT3G61030.1); Has 7034 Blast hits to 5237 proteins in 360 species: Archae - 8; Bacteria - 265; Metazoa - 4095; Fungi - 909; Plants - 1092; Viruses - 2; Other Eukaryotes - 663 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0006869
IEA
GOA Databaselipid transport
GO:0045892
IMP
Gene Ontologynegative regulation of transcription, DNA-templated1
GO:0009958
IMP
Gene Ontologypositive gravitropism1
GO:0009651
IMP
Gene Ontologyresponse to salt stress1
GO:0009414
IMP
Gene Ontologyresponse to water deprivation1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008289
IEA
GOA Databaselipid binding
GO:0008289
IDA
Gene Ontologylipid binding1
GO:0008289
IEA
InterProlipid binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0005515
IPI
Gene Ontologyprotein binding2
GO:0097001
IDA
Gene Ontologyceramide binding1
GO:0043565
IDA, IPI
Gene Ontologysequence-specific DNA binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005783
IDA, HDA
IBA
Gene Ontologyendoplasmic reticulum3 4 5
GO:0005634
IEA
GOA Databasenucleus
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0005886
IDA
GOA Databaseplasma membrane
GO:0005886
HDA
ISM
Gene Ontologyplasma membrane6
GO:0031965
IEA
GOA Databasenuclear membrane
GO:0031965
IDA
Gene Ontologynuclear membrane1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR039010 Synaptotagmin, SMP domain
IPR000008 C2 domain
IPR035892 C2 domain superfamily
IPR031069 Calcium-dependent lipid-binding transcriptional regulator, plant
IPR045050 Synaptotagmin, plant
Mapman id Description
35.1 not assigned.annotated