Gene: AT2G38280

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G38280
  • Transcript Identifier AT2G38280.2
  • Gene Type Coding gene
  • Location Chr2 : 16033767-16038793 : negative

Gene Family Information

Gene Duplication Information

Labels

Identifiers

  • tid AT2G38280.2
  • symbol FAC1
  • Alias ATAMPD,ADENOSINE 5'-MONOPHOSPHATE DEAMINASE
  • full_name EMBRYONIC FACTOR1
  • uniprot O80452

Descriptions

  • Description AMP deaminase, putative / myoadenylate deaminase
  • Computational description EMBRYONIC FACTOR1 (FAC1); FUNCTIONS IN: AMP deaminase activity; INVOLVED IN: purine ribonucleoside monophosphate biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: cytosol, nucleus, microsome; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenosine/AMP deaminase (InterPro:IPR001365), Adenosine/AMP deaminase active site (InterPro:IPR006650), AMP deaminase (InterPro:IPR006329); Has 1191 Blast hits to 1128 proteins in 362 species: Archae - 0; Bacteria - 226; Metazoa - 390; Fungi - 271; Plants - 78; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009117
IEA
GOA Databasenucleotide metabolic process
GO:0008152
IEA
GOA Databasemetabolic process
GO:0009168
IEA
GOA Databasepurine ribonucleoside monophosphate biosynthetic process
GO:0032264
IEA
Gene OntologyIMP salvage
GO:0032264
IEA
InterProIMP salvage
GO:0009737
IDA
GOA Databaseresponse to abscisic acid
GO:0046033
IBA
Gene OntologyAMP metabolic process1
GO:0006188
IBA
Gene OntologyIMP biosynthetic process1
GO:0009793
IMP
Gene Ontologyembryo development ending in seed dormancy2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0019239
IEA
GOA Databasedeaminase activity
GO:0019239
IEA
InterProdeaminase activity
GO:0003876
IEA
GOA DatabaseAMP deaminase activity
GO:0003876
IGI
IBA
Gene OntologyAMP deaminase activity1 2
GO:0003876
IEA
InterProAMP deaminase activity
GO:0043424
IPI
Gene Ontologyprotein histidine kinase binding3
GO:0005515
IPI
Gene Ontologyprotein binding3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IDA
GOA Databasenucleus
GO:0043231
IEA
GOA Databaseintracellular membrane-bounded organelle
GO:0043231
IDA
Gene Ontologyintracellular membrane-bounded organelle4
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0005829
IDA
GOA Databasecytosol
GO:0005829
IBA
Gene Ontologycytosol1
GO:0005783
IEA
GOA Databaseendoplasmic reticulum
GO:0005783
HDA
Gene Ontologyendoplasmic reticulum5
GO:0009507
ISM
Gene Ontologychloroplast
GO:0016020
IEA
GOA Databasemembrane
GO:0031307
IDA
Gene Ontologyintegral component of mitochondrial outer membrane6

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006329 AMP deaminase
IPR001365 Adenosine/AMP deaminase domain
IPR032466 Metal-dependent hydrolase
Mapman id Description
6.1.2.1.1 Nucleotide metabolism.purines.GMP biosynthesis.AMP deaminase activities.membrane-associated AMP deaminase (FAC1)