Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold7G03877 scaffold7 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G9050 LG-2 - View
Aethionema arabicum Aa31LG9G9590 LG-9 + View
Acer truncatum Atru.chr10.2157 chr10 + View
Actinidia chinensis Actinidia11843 Lachesis_group6 + View
Arabidopsis lyrata AL2G14310 scaffold_2 - View
Arabidopsis lyrata AL7G32190 scaffold_7 - View
Arabidopsis lyrata AL6G48410 scaffold_6 - View
Avicennia marina MSTRG.15970 ScioBoG_19538_HRSCAF_19626 + View
Avicennia marina MSTRG.7235 ScioBoG_102840_HRSCAF_103099 - View
Avicennia marina MSTRG.13156 ScioBoG_17730_HRSCAF_17811 - View
Avicennia marina MSTRG.14646 ScioBoG_18782_HRSCAF_18867 - View
Arabidopsis thaliana AT4G04900 ROP-interactive CRIB motif-containing protein 10 encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). Most similar to RIC9 and RIC11 (subfamily group I). Gene is expressed predominantly in roots%2C leaves%2C and seedlings. ROP-interactive CRIB motif-containing protein 10 (RIC10)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: pollen tube growth%3B LOCATED IN: cytoplasm%3B EXPRESSED IN: seed%3B EXPRESSED DURING: E expanded cotyledon stage%3B CONTAINS InterPro DOMAIN/s: PAK-box/P21-Rho-binding (InterPro:IPR000095)%3B BEST Arabidopsis thaliana protein match is: PAK-box/P21-Rho-binding family protein (TAIR:AT4G21745.1)%3B Has 685 Blast hits to 255 proteins in 41 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 53%3B Fungi - 27%3B Plants - 173%3B Viruses - 0%3B Other Eukaryotes - 432 (source: NCBI BLink). Chr4 - View
Arabidopsis thaliana AT4G21745 PAK-box/P21-Rho-binding family protein PAK-box/P21-Rho-binding family protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B CONTAINS InterPro DOMAIN/s: PAK-box/P21-Rho-binding (InterPro:IPR000095)%3B BEST Arabidopsis thaliana protein match is: ROP-interactive CRIB motif-containing protein 10 (TAIR:AT4G04900.1)%3B Has 128 Blast hits to 128 proteins in 16 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 2%3B Plants - 126%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr4 + View
Arabidopsis thaliana AT1G61795 PAK-box/P21-Rho-binding family protein PAK-box/P21-Rho-binding family protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B CONTAINS InterPro DOMAIN/s: PAK-box/P21-Rho-binding (InterPro:IPR000095)%3B BEST Arabidopsis thaliana protein match is: ROP-interactive CRIB motif-containing protein 10 (TAIR:AT4G04900.1)%3B Has 175 Blast hits to 175 proteins in 15 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 175%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaNung00837 Contig365 - View
Brassica carinata BcaC04g22353 ChrC04 + View
Brassica carinata BcaB07g31287 ChrB07 + View
Brassica carinata BcaC04g21341 ChrC04 - View
Brassica carinata BcaC06g31866 ChrC06 + View
Brassica carinata BcaC09g51210 ChrC09 - View
Brassica carinata BcaB01g01845 ChrB01 - View
Brassica napus A03p52910 A03 + View
Brassica napus C04p27780 C04 + View
Brassica napus A09p26010 A09 + View
Brassica napus A09p16640 A09 - View
Brassica napus C09p20210 C09 - View
Brassica napus C07p51360 C07 + View
Brassica napus C09p32970 C09 + View
Brassica napus A01p13070 A01 + View
Brassica oleracea BolC9t54928H C9 - View
Brassica oleracea BolC7t45635H C7 + View
Brassica oleracea BolC1t01528H C1 + View
Brassica oleracea BolC4t24321H C4 + View
Brassica oleracea BolC9t56132H C9 + View
Brassica rapa BraA09t38167Z A09 + View
Brassica rapa BraA01t01250Z A01 + View
Brassica rapa BraA09t37303Z A09 - View
Brassica rapa BraA03t14367Z A03 + View
Camellia sinensis var. sinensis CSS0038952 PREDICTED: CRIB domain-containing protein RIC10 [Vitis vinifera] Chr8 - View
Camellia sinensis var. sinensis CSS0029318 PREDICTED: CRIB domain-containing protein RIC10 [Sesamum indicum] Chr8 - View
Capsicum annuum CAN.G404.12 PGAv.1.6.scaffold404 + View
Capsicum annuum CAN.G569.29 PGAv.1.6.scaffold569 - View
Capsicum annuum CAN.G105.5 PGAv.1.6.scaffold105 + View
Cannabis sativa CANSAT56G0251 NC_044371.1 - View
Corylus avellana Haze_06752 Similar to RIC10: CRIB domain-containing protein RIC10 (Arabidopsis thaliana OX%3D3702) 2 + View
Coffea canephora Cc02_g11580 Uncharacterized protein chr2 - View
Citrus clementina Ciclev10017098m.g scaffold_2 - View
Carpinus fangiana Cfa000263 Cfa01 - View
Cardamine hirsuta CARHR228480 ROP-interactive CRIB motif-containing protein 10 Chr7 + View
Cardamine hirsuta CARHR252630 ROP-interactive CRIB motif-containing protein 10 Chr8 + View
Cardamine hirsuta CARHR050540 PAK-box/P21-Rho-binding family protein Chr2 - View
Carya illinoinensis CiPaw.09G088200 PTHR23177//PTHR23177:SF27 - MKIAA1688 PROTEIN // SUBFAMILY NOT NAMED Chr09 + View
Carya illinoinensis CiPaw.10G068600 PTHR23177//PTHR23177:SF27 - MKIAA1688 PROTEIN // SUBFAMILY NOT NAMED Chr10 + View
Citrullus lanatus ClCG03G004940 ROP-INTERACTIVE CRIB MOTIF-CONTAINING protein 10 CG_Chr03 - View
Citrullus lanatus ClCG01G022130 ROP-interactive CRIB motif-containing protein 10 LENGTH=156 CG_Chr01 - View
Cucumis melo MELO3C007376.2 Crib domain-containing protein ric10 chr08 + View
Cucumis melo MELO3C002478.2 Crib domain-containing protein ric10 chr12 + View
Carica papaya Cpa.g.sc198.16 supercontig_198 + View
Capsella rubella Carub.0002s0326 PTHR23177//PTHR23177:SF8 - MKIAA1688 PROTEIN // CRIB DOMAIN-CONTAINING PROTEIN RIC1-RELATED scaffold_2 - View
Capsella rubella Carub.0006s3282 PTHR23177//PTHR23177:SF8 - MKIAA1688 PROTEIN // CRIB DOMAIN-CONTAINING PROTEIN RIC1-RELATED scaffold_6 - View
Capsella rubella Carub.0007s1966 PTHR23177//PTHR23177:SF8 - MKIAA1688 PROTEIN // CRIB DOMAIN-CONTAINING PROTEIN RIC1-RELATED scaffold_7 - View
Cucumis sativus L. CsaV3_1G011000 CRIB domain-containing protein RIC10-like chr1 - View
Cucumis sativus L. CsaV3_6G049190 CRIB domain containing protein chr6 - View
Daucus carota DCAR_008131 hypothetical protein DCARv2_Chr2 - View
Daucus carota DCAR_004203 hypothetical protein DCARv2_Chr1 - View
Davidia involucrata Dinv20024 GWHABJS00000020 + View
Durio zibethinus Duzib160G0153 NW_019168015.1 + View
Durio zibethinus Duzib192G0988 NW_019168037.1 - View
Erigeron canadensis ECA236G0051 Conyza_canadensis_scaffold:3 + View
Eucalyptus grandis Eucgr.E04111 Chr05 + View
Eucalyptus grandis Eucgr.D01296 Chr04 + View
Erythranthe guttata Migut.H01556 scaffold_8 + View
Erythranthe guttata Migut.M01291 scaffold_13 + View
Eutrema salsugineum Thhalv10023756m.g PTHR23177:SF8 - CRIB DOMAIN-CONTAINING PROTEIN RIC1-RELATED scaffold_8 - View
Eutrema salsugineum Thhalv10027539m.g PTHR23177:SF8 - CRIB DOMAIN-CONTAINING PROTEIN RIC1-RELATED scaffold_1 - View
Eutrema salsugineum Thhalv10029507m.g PTHR23177:SF8 - CRIB DOMAIN-CONTAINING PROTEIN RIC1-RELATED scaffold_3 + View
Fragaria vesca FvH4_3g02570 PF00786 - P21-Rho-binding domain (PBD) Fvb3 + View
Gossypium hirsutum Gohir.D06G152101 PTHR23177//PTHR23177:SF8 - MKIAA1688 PROTEIN // CRIB DOMAIN-CONTAINING PROTEIN RIC1-RELATED D06 + View
Gossypium hirsutum Gohir.D06G213350 PF00786 - P21-Rho-binding domain (PBD) D06 + View
Gossypium hirsutum Gohir.A10G014700 PF00786 - P21-Rho-binding domain (PBD) A10 - View
Gossypium hirsutum Gohir.A06G208001 PF00786 - P21-Rho-binding domain (PBD) A06 + View
Gossypium hirsutum Gohir.D10G014700 PTHR23177//PTHR23177:SF27 - MKIAA1688 PROTEIN // SUBFAMILY NOT NAMED D10 - View
Glycine max Glyma.20G142100 PTHR23177 - MKIAA1688 PROTEIN Gm20 + View
Gossypium raimondii Gorai.010G177600 Chr10 + View
Gossypium raimondii Gorai.010G252800 Chr10 - View
Gossypium raimondii Gorai.011G016300 Chr11 - View
Gossypium raimondii Gorai.009G176800 Chr09 + View
Hydrangea macrophylla Hma1.2p1_0091F.1_g046220 Hma1.2p1_0091F.1 + View
Lactuca sativa Lsat_1_v5_gn_7_17080 PTHR23177//PTHR23177:SF27 - MKIAA1688 PROTEIN // SUBFAMILY NOT NAMED Lsat_1_v8_lg_7 - View
Malus domestica MD05G1341900 PAK-box/P21-Rho-binding family protein Chr05 + View
Manihot esculenta Manes.16G011200 Chromosome16 - View
Manihot esculenta Manes.17G036200 Chromosome17 - View
Nelumbo nucifera Nn1g03610 chr1 - View
Nicotiana tabacum Nitab4.5_0002347g0040 CRIB domain Nitab4.5_0002347 - View
Petunia axillaris Peaxi162Scf00262g00118 Unknown protein Peaxi162Scf00262 + View
Punica granatum PGR042G1077 NC_045130.1 - View
Prunus persica Prupe.4G025100 PTHR23177 - MKIAA1688 PROTEIN Pp04 - View
Papaver somniferum PSO541G3920 NC_039363.1 + View
Papaver somniferum PSO675G8405 NC_039358.1 + View
Populus trichocarpa Potri.004G020650 PF00786 - P21-Rho-binding domain (PBD) Chr04 - View
Populus trichocarpa Potri.011G025300 PF00786 - P21-Rho-binding domain (PBD) Chr11 - View
Quercus lobata QL05p074702 5 - View
Rosa chinensis RcHm_v2.0_Chr5g0003861 RcHm_v2.0_Chr5 - View
Rhododendron simsii Rhsim02G0111200 chr02 - View
Rhododendron simsii Rhsim13G0157100 chr13 - View
Salvia bowleyana SalBow8G5187 GWHASIU00000004 - View
Salix brachista Sabra11G0021600 GWHAAZH00000011 - View
Simmondsia chinensis Sc17g0007140 GWHAASQ00000017 + View
Simmondsia chinensis Sc05g0008930 GWHAASQ00000005 + View
Sechium edule Sed0003182 LG01 + View
Sechium edule Sed0003752 LG08 + View
Sechium edule Sed0026332 LG10 - View
Solanum lycopersicum Solyc02g080230.3 CRIB domain-containing protein RIC10 (AHRD V3.3 *** A0A1U8FUJ1_CAPAN) SL4.0ch02 + View
Schrenkiella parvula Sp7g19910 PTHR23177//PTHR23177:SF8 - MKIAA1688 PROTEIN // CRIB DOMAIN-CONTAINING PROTEIN RIC1-RELATED ch7-4 + View
Schrenkiella parvula Sp2g02740 PTHR23177:SF8 - CRIB DOMAIN-CONTAINING PROTEIN RIC1-RELATED ch2-2 - View
Schrenkiella parvula Sp6g04060 PTHR23177:SF8 - CRIB DOMAIN-CONTAINING PROTEIN RIC1-RELATED ch6-1 + View
Solanum pennellii Sopen02g024950 encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). Most similar to RIC9 and RIC11 (subfamily group I). Gene is expressed predominantly in roots, leaves, and seedlings. | ROP-interactive CRIB motif-containing protein 10 (RIC10) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: pollen tube growth | LOCATED IN: cytoplasm | EXPRESSED IN: seed | EXPRESSED DURING: E expanded cotyledon stage | CONTAINS InterPro DOMAIN/s: PAK-box/P21-Rho-binding | BEST Arabidopsis thaliana protein match is: PAK-box/P21-Rho-binding family protein Spenn-ch02 + View
Solanum tuberosum PGSC0003DMG400011255 P21-rho-binding domain-containing protein ST4.03ch10 - View
Selenicereus undatus Hund23503 Scaffold_3410 - View
Selenicereus undatus Hund21381 Scaffold_33680 + View
Trochodendron aralioides TAR626G0322 group3 - View
Trochodendron aralioides TAR624G0338 group9 + View
Theobroma cacao Thecc.06G215400 ROP-interactive CRIB motif-containing protein 10 Chromosome_6 + View
Tarenaya hassleriana THA.LOC104818880 CRIB domain-containing protein RIC9 NW_010960187.1 - View
Tarenaya hassleriana THA.LOC104806292 uncharacterized protein LOC104806292 NW_010962392.1 + View
Tripterygium wilfordii TWI38G0758 NC_052252.1 + View
Tripterygium wilfordii TWI63G0184 NC_052240.1 - View
Vaccinium macrocarpon vmacro03701 Similar to RIC11: CRIB domain-containing protein RIC11 (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro15825 Similar to RIC11: CRIB domain-containing protein RIC11 (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01012640001 chr10 + View