Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold34G13769 scaffold34 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G2240 LG-8 + View
Acer truncatum Atru.chr2.2258 chr2 + View
Actinidia chinensis Actinidia18788 Lachesis_group9 + View
Actinidia chinensis Actinidia39497 Lachesis_group17 - View
Actinidia chinensis Actinidia35225 Lachesis_group2 + View
Arabidopsis lyrata AL3G27370 scaffold_3 + View
Avicennia marina MSTRG.7387 ScioBoG_102840_HRSCAF_103099 + View
Avicennia marina MSTRG.12881 ScioBoG_17730_HRSCAF_17811 + View
Avicennia marina MSTRG.6808 ScioBoG_102840_HRSCAF_103099 + View
Aquilegia oxysepala Aqoxy1G02192 CHR01 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.D15RR9 PTHR31072:SF3 - TRANSCRIPTION FACTOR TCP10-RELATED arahy.Tifrunner.gnm1.Arahy.08 - View
Arabidopsis thaliana AT3G15030 TCP family transcription factor 4 Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation. TCP family transcription factor 4 (TCP4)%3B CONTAINS InterPro DOMAIN/s: Transcription factor%2C TCP (InterPro:IPR005333)%2C Transcription factor TCP subgroup (InterPro:IPR017887)%3B BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1%2C cycloidea and PCF transcription factor 3 (TAIR:AT1G53230.1)%3B Has 1577 Blast hits to 1575 proteins in 330 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 88%3B Fungi - 13%3B Plants - 1470%3B Viruses - 0%3B Other Eukaryotes - 6 (source: NCBI BLink). Chr3 + View
Brassica carinata BcaB06g29530 ChrB06 + View
Brassica carinata BcaB04g20952 ChrB04 - View
Brassica carinata BcaC09g48462 ChrC09 + View
Brassica napus A03p39100 A03 + View
Brassica napus A05p34390 A05 - View
Brassica napus C05p52170 C05 - View
Brassica napus C01p49490 C01 - View
Brassica oleracea BolC5t33901H C5 - View
Brassica oleracea BolC1t04906H C1 - View
Brassica rapa BraA05t22260Z A05 - View
Brassica rapa BraA03t13059Z A03 + View
Cannabis sativa CANSAT35G1121 NC_044378.1 - View
Cicer arietinum L. Ca_04014_v3 Ca_LG1_v3 + View
Corylus avellana Haze_09358 Similar to TCP3: Transcription factor TCP3 (Arabidopsis thaliana OX%3D3702) 4 + View
Coffea canephora Cc05_g11430 Transcription factor TCP4 chr5 + View
Coffea canephora Cc05_g08060 Putative Transcription factor TCP4 chr5 + View
Citrus clementina Ciclev10008390m.g scaffold_1 + View
Carpinus fangiana Cfa019602 Cfa08 + View
Cardamine hirsuta CARHR089990 Transcription factor TCP4 Chr3 + View
Citrullus lanatus ClCG11G017590 Transcription factor TCP4 CG_Chr11 + View
Cucumis melo MELO3C025629.2 transcription factor TCP4 chr07 + View
Cucumis melo MELO3C016092.2 transcription factor TCP4 chr07 - View
Carica papaya Cpa.g.sc131.71 supercontig_131 + View
Chenopodium quinoa AUR62019560 TCP3: Transcription factor TCP3 C_Quinoa_Scaffold_2127 + View
Capsella rubella Carub.0003s1467 PTHR31072:SF3 - TRANSCRIPTION FACTOR TCP10-RELATED scaffold_3 + View
Cucumis sativus L. CsaV3_4G008400 transcription factor TCP4 chr4 + View
Cucumis sativus L. CsaV3_4G033270 transcription factor TCP4 chr4 + View
Cucumis sativus L. CsaV3_1G012680 transcription factor TCP10-like chr1 - View
Daucus carota DCAR_019587 hypothetical protein DCARv2_Chr5 - View
Davidia involucrata Dinv14964 GWHABJS00000001 + View
Davidia involucrata Dinv18340 GWHABJS00000013 - View
Durio zibethinus Duzib213G0620 NW_019167993.1 - View
Durio zibethinus Duzib170G0508 NW_019167871.1 - View
Durio zibethinus Duzib268G0183 NW_019168270.1 - View
Erigeron canadensis ECA236G2840 Conyza_canadensis_scaffold:3 + View
Erigeron canadensis ECA234G3737 Conyza_canadensis_scaffold:4 + View
Eucalyptus grandis Eucgr.F01204 Chr06 - View
Erythranthe guttata Migut.M00750 scaffold_13 + View
Erythranthe guttata Migut.H01974 scaffold_8 - View
Eutrema salsugineum Thhalv10020786m.g PTHR31072:SF3 - TRANSCRIPTION FACTOR TCP10-RELATED scaffold_13 - View
Fragaria x ananassa FAN16G3219 PTHR31072//PTHR31072:SF3 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP10-RELATED Fvb3-3 + View
Fragaria x ananassa FAN21G1184 PTHR31072:SF3 - TRANSCRIPTION FACTOR TCP10-RELATED Fvb3-2 - View
Fragaria x ananassa FAN25G3709 PTHR31072:SF3 - TRANSCRIPTION FACTOR TCP10-RELATED Fvb3-1 - View
Fragaria x ananassa FAN11G1302 PTHR31072//PTHR31072:SF3 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP10-RELATED Fvb3-4 - View
Fragaria vesca FvH4_3g18740 PTHR31072//PTHR31072:SF3 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP10-RELATED Fvb3 + View
Gossypium hirsutum Gohir.A01G058800 PTHR31072:SF3 - TRANSCRIPTION FACTOR TCP10-RELATED A01 + View
Gossypium hirsutum Gohir.A04G037900 PTHR31072:SF3 - TRANSCRIPTION FACTOR TCP10-RELATED A04 - View
Gossypium hirsutum Gohir.D01G044900 PTHR31072:SF3 - TRANSCRIPTION FACTOR TCP10-RELATED D01 + View
Gossypium hirsutum Gohir.D13G152900 PTHR31072:SF3 - TRANSCRIPTION FACTOR TCP10-RELATED D13 - View
Gossypium hirsutum Gohir.D05G345000 PTHR31072:SF3 - TRANSCRIPTION FACTOR TCP10-RELATED D05 + View
Glycine max Glyma.13G292500 PTHR31072:SF3 - TRANSCRIPTION FACTOR TCP10-RELATED Gm13 + View
Glycine max Glyma.06G232300 PTHR31072:SF3 - TRANSCRIPTION FACTOR TCP10-RELATED Gm06 + View
Glycine max Glyma.13G271700 PTHR31072:SF3 - TRANSCRIPTION FACTOR TCP10-RELATED Gm13 + View
Glycine max Glyma.12G158900 PTHR31072:SF3 - TRANSCRIPTION FACTOR TCP10-RELATED Gm12 - View
Gossypium raimondii Gorai.002G064500 Chr02 + View
Gossypium raimondii Gorai.009G373000 Chr09 + View
Gossypium raimondii Gorai.013G172800 Chr13 - View
Hydrangea macrophylla Hma1.2p1_0416F.1_g148630 Hma1.2p1_0416F.1 - View
Lupinus albus Lalb_Chr14g0367311 PF03634 - TCP family transcription factor (TCP) Lalb_Chr14 - View
Lupinus albus Lalb_Chr19g0133961 PTHR31072//PTHR31072:SF3 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP10-RELATED Lalb_Chr19 + View
Lupinus albus Lalb_Chr01g0006701 PTHR31072:SF3 - TRANSCRIPTION FACTOR TCP10-RELATED Lalb_Chr01 - View
Lotus japonicus Lj3g0013210 PTHR31072:SF3 - TRANSCRIPTION FACTOR TCP10-RELATED chr3 - View
Lotus japonicus Lj3g0000677 PF03634 - TCP family transcription factor (TCP) chr3 + View
Lonicera japonica Lj1P834T10 GWHAAZE00000001 + View
Lonicera japonica Lj8E152T0 GWHAAZE00000008 + View
Lonicera japonica Lj1P1196T18 GWHAAZE00000001 + View
Lactuca sativa Lsat_1_v5_gn_9_99020 PTHR31072:SF3 - TRANSCRIPTION FACTOR TCP10-RELATED Lsat_1_v8_lg_9 - View
Malus domestica MD05G1305100 TCP domain protein 10 Chr05 + View
Malus domestica MD11G1258900 TCP family transcription factor 4 Chr11 - View
Malus domestica MD03G1239100 TCP family transcription factor 4 Chr03 - View
Manihot esculenta Manes.15G091000 Chromosome15 - View
Medicago truncatula Medtr2g078200 TCP family transcription factor chr2 + View
Olea europaea Oeu025346.1 chr19 + View
Olea europaea Oeu005393.1 chr10 - View
Olea europaea Oeu061339.1 chr21 - View
Olea europaea Oeu051103.1 chr6 - View
Petunia axillaris Peaxi162Scf00069g00202 TCP family transcription factor 4 Peaxi162Scf00069 - View
Petunia axillaris Peaxi162Scf00000g00252 TCP family transcription factor 4 Peaxi162Scf00000 + View
Punica granatum PGR083G2181 NC_045133.1 - View
Punica granatum PGR042G1626 NC_045130.1 + View
Prunus persica Prupe.4G171100 PTHR31072:SF3 - TRANSCRIPTION FACTOR TCP10-RELATED Pp04 + View
Papaver somniferum PSO541G2023 NC_039363.1 - View
Populus trichocarpa Potri.011G096600 PTHR31072:SF3 - TRANSCRIPTION FACTOR TCP10-RELATED Chr11 - View
Populus trichocarpa Potri.001G375800 PTHR31072:SF3 - TRANSCRIPTION FACTOR TCP10-RELATED Chr01 - View
Phaseolus vulgaris Phvul.005G097200 Chr05 + View
Phaseolus vulgaris Phvul.005G067950 PTHR31072:SF3 - TRANSCRIPTION FACTOR TCP10-RELATED Chr05 + View
Quercus lobata QL08p027336 8 + View
Rhododendron simsii Rhsim04G0024200 chr04 - View
Salvia bowleyana SalBow8G1773 GWHASIU00000004 + View
Salix brachista Sabra11G0090000 GWHAAZH00000011 - View
Salix brachista Sabra16G0247700 GWHAAZH00000016 - View
Simmondsia chinensis Sc03g0010420 GWHAASQ00000003 + View
Simmondsia chinensis Sc16g0007400 GWHAASQ00000016 - View
Sechium edule Sed0011423 LG04 + View
Sechium edule Sed0009838 LG13 + View
Solanum lycopersicum Solyc12g014140.3 SlTCP3 SL4.0ch12 - View
Solanum lycopersicum Solyc07g062680.3 cycloidea SL4.0ch07 + View
Solanum lycopersicum Solyc07g053410.4 TCP transcription factor 10 SL4.0ch07 + View
Schrenkiella parvula Sp3g13230 PTHR31072//PTHR31072:SF3 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP10-RELATED ch3-1 + View
Solanum pennellii Sopen12g005920 Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation. | TCP family transcription factor 4 (TCP4) | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: in 6 processes | LOCATED IN: cellular_component unknown | EXPRESSED IN: 19 plant structures | EXPRESSED DURING: 12 growth stages | CONTAINS InterPro DOMAIN/s: Transcription factor, TCP , Transcription factor TCP subgroup | BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 . Spenn-ch12 - View
Solanum pennellii Sopen07g030910 Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation. | TCP family transcription factor 4 (TCP4) | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: in 6 processes | LOCATED IN: cellular_component unknown | EXPRESSED IN: 19 plant structures | EXPRESSED DURING: 12 growth stages | CONTAINS InterPro DOMAIN/s: Transcription factor, TCP , Transcription factor TCP subgroup | BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 . Spenn-ch07 + View
Solanum pennellii Sopen07g027370 Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation. | TCP family transcription factor 4 (TCP4) | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: in 6 processes | LOCATED IN: cellular_component unknown | EXPRESSED IN: 19 plant structures | EXPRESSED DURING: 12 growth stages | CONTAINS InterPro DOMAIN/s: Transcription factor, TCP , Transcription factor TCP subgroup | BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 . Spenn-ch07 + View
Solanum tuberosum PGSC0003DMG400009406 Transcription factor ST4.03ch07 - View
Solanum tuberosum PGSC0003DMG400012396 Lanceolate ST4.03ch07 + View
Solanum tuberosum PGSC0003DMG400015377 SlTCP3 ST4.03ch12 + View
Theobroma cacao Thecc.07G103800 Chromosome_7 - View
Tarenaya hassleriana THA.LOC104810598 transcription factor TCP4 NW_010965216.1 + View
Tripterygium wilfordii TWI39G0392 NC_052250.1 + View
Tripterygium wilfordii TWI38G1929 NC_052252.1 + View
Tripterygium wilfordii TWI38G2373 NC_052252.1 - View
Utricularia gibba unitig_37.g12561 unitig_37 + View
Utricularia gibba unitig_86.g29835 unitig_86 + View
Vaccinium macrocarpon vmacro11907 Similar to TCP4: Transcription factor TCP4 (Arabidopsis thaliana OX%3D3702) chr11_Vaccinium_macrocarpon_Stevens_v1 - View
Vitis vinifera GSVIVG01014236001 chr19 + View