Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG10G13870 LG-10 - View
Aethionema arabicum Aa31LG1G25160 LG-1 - View
Arabidopsis lyrata AL4G42150 scaffold_4 - View
Arabidopsis lyrata AL5G41460 scaffold_5 - View
Amaranthus hybridus Ah.13g073790 Flowering time control protein FPA AmaHy_arrow1_Scaffold_13 + View
Arabidopsis thaliana AT2G43410 RNA binding protein FPA is a gene that regulates flowering time in Arabidopsis via a pathway that is independent of daylength (the autonomous pathway). Mutations in FPA result in extremely delayed flowering. Double mutants with FCA have reduced fertility and single/double mutants have defects in siRNA mediated chromatin silencing. FPA%3B CONTAINS InterPro DOMAIN/s: Spen paralogue and orthologue SPOC%2C C-terminal (InterPro:IPR012921)%2C RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: RNA recognition motif (RRM)-containing protein (TAIR:AT4G12640.1)%3B Has 18609 Blast hits to 15572 proteins in 650 species: Archae - 12%3B Bacteria - 876%3B Metazoa - 10127%3B Fungi - 2512%3B Plants - 3298%3B Viruses - 9%3B Other Eukaryotes - 1775 (source: NCBI BLink). Chr2 - View
Brassica carinata BcaC07g40485 ChrC07 - View
Brassica carinata BcaB01g03384 ChrB01 + View
Brassica carinata BcaC02g12397 ChrC02 + View
Brassica napus C04p04460 C04 - View
Brassica napus A05p03760 A05 - View
Brassica napus A09p51810 A09 - View
Brassica napus C08p34540 C08 - View
Brassica oleracea BolC8t51055H C8 - View
Brassica rapa BraA09t40616Z A09 - View
Camellia sinensis var. sinensis CSS0012722 PREDICTED: flowering time control protein FPA-like [Pyrus x bretschneideri] Chr9 - View
Cicer arietinum L. Ca_20799_v3 Ca_LG6_v3 - View
Citrus clementina Ciclev10018733m.g scaffold_3 + View
Cardamine hirsuta CARHR169920 RNA binding Chr5 - View
Cardamine hirsuta CARHR138490 RNA binding Chr4 - View
Carica papaya Cpa.g.sc9.316 supercontig_9 - View
Capsella rubella Carub.0005s2627 PTHR23189:SF45 - FLOWERING TIME CONTROL PROTEIN FPA scaffold_5 - View
Capsella rubella Carub.0004s2588 KOG0117//KOG0148 - Heterogeneous nuclear ribonucleoprotein R (RRM superfamily) // Apoptosis-promoting RNA-binding protein TIA-1/TIAR (RRM superfamily) scaffold_4 - View
Davidia involucrata Dinv05078 GWHABJS00000016 + View
Durio zibethinus Duzib151G0795 NW_019167904.1 + View
Durio zibethinus Duzib268G0577 NW_019168270.1 + View
Eucalyptus grandis Eucgr.A00103 Chr01 - View
Erythranthe guttata Migut.N03099 scaffold_14 + View
Erythranthe guttata Migut.G01324 scaffold_7 + View
Eutrema salsugineum Thhalv10001307m.g PTHR23189:SF45 - FLOWERING TIME CONTROL PROTEIN FPA scaffold_22 - View
Gossypium hirsutum Gohir.A02G011500 KOG0123//KOG0144//KOG0145 - Polyadenylate-binding protein (RRM superfamily) // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) // RNA-binding protein ELAV/HU (RRM superfamily) A02 + View
Gossypium hirsutum Gohir.D02G012300 KOG0123//KOG0145//KOG0148 - Polyadenylate-binding protein (RRM superfamily) // RNA-binding protein ELAV/HU (RRM superfamily) // Apoptosis-promoting RNA-binding protein TIA-1/TIAR (RRM superfamily) D02 + View
Glycine max Glyma.11G126400 KOG0106//KOG0108//KOG0114//KOG0131//KOG0144//KOG0148//KOG4206 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // mRNA cleavage and polyadenylation factor I complex, subunit RNA15 // Predicted RNA-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) // Apoptosis-promoting RNA-binding protein TIA-1/TIAR (RRM superfamily) // Spliceosomal protein snRNP-U1A/U2B Gm11 + View
Glycine max Glyma.12G051000 PTHR23189:SF45 - FLOWERING TIME CONTROL PROTEIN FPA Gm12 + View
Glycine max Glyma.13G345300 KOG0117//KOG0123//KOG0145 - Heterogeneous nuclear ribonucleoprotein R (RRM superfamily) // Polyadenylate-binding protein (RRM superfamily) // RNA-binding protein ELAV/HU (RRM superfamily) Gm13 - View
Gossypium raimondii Gorai.005G015700 Chr05 + View
Lupinus albus Lalb_Chr24g0396761 PTHR23189:SF45 - FLOWERING TIME CONTROL PROTEIN FPA Lalb_Chr24 + View
Lupinus albus Lalb_Chr01g0003091 PF00076//PF07744//PF13893 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // SPOC domain (SPOC) // RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_5) Lalb_Chr01 + View
Lotus japonicus Lj3g0003139 PTHR23189:SF45 - FLOWERING TIME CONTROL PROTEIN FPA chr3 - View
Malus domestica MD04G1045000 RNA binding Chr04 - View
Manihot esculenta Manes.04G039300 Chromosome04 + View
Olea europaea Oeu034445.2 scaffold290 + View
Prunus persica Prupe.1G197900 Pp01 - View
Populus trichocarpa Potri.017G026600 PTHR23189:SF45 - FLOWERING TIME CONTROL PROTEIN FPA Chr17 + View
Populus trichocarpa Potri.007G131100 PTHR23189:SF45 - FLOWERING TIME CONTROL PROTEIN FPA Chr07 - View
Phaseolus vulgaris Phvul.011G053300 Chr11 + View
Phaseolus vulgaris Phvul.005G154000 Chr05 - View
Quercus lobata QL10p050788 10 - View
Rhododendron simsii Rhsim02G0082400 chr02 - View
Sechium edule Sed0001804 LG09 + View
Schrenkiella parvula Sp4g25510 KOG0106//KOG0117//KOG0123//KOG0131//KOG0148 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Heterogeneous nuclear ribonucleoprotein R (RRM superfamily) // Polyadenylate-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 // Apoptosis-promoting RNA-binding protein TIA-1/TIAR (RRM superfamily) ch4-6 - View
Schrenkiella parvula Sp5g03620 KOG0123//KOG0131//KOG0148 - Polyadenylate-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 // Apoptosis-promoting RNA-binding protein TIA-1/TIAR (RRM superfamily) ch5-1 + View
Trochodendron aralioides TAR362G0143 group17 + View
Theobroma cacao Thecc.04G175200 RNA recognition motif-containing protein Chromosome_4 + View
Tarenaya hassleriana THA.LOC104803786 flowering time control protein FPA-like NW_010960188.1 - View
Trifolium pratense TPR.G34226 Tp57577_TGAC_v2_LG3 + View
Vigna mungo VMungo1127G0975 CM024076.1 + View
Vigna mungo VMungo1080G1168 CM024079.1 + View