Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr2.69 chr2 + View
Amaranthus hybridus Ah.06g189820 AmaHy_arrow1_Scaffold_6 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.ZM6EKQ K03065 - 26S proteasome regulatory subunit T5 (PSMC3, RPT5) arahy.Tifrunner.gnm1.Arahy.19 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.ECLV29 K03065 - 26S proteasome regulatory subunit T5 (PSMC3, RPT5) arahy.Tifrunner.gnm1.Arahy.16 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.4BL4Y4 K03065 - 26S proteasome regulatory subunit T5 (PSMC3, RPT5) arahy.Tifrunner.gnm1.Arahy.06 + View
Arabidopsis thaliana AT3G05530 regulatory particle triple-A ATPase 5A Encodes RPT5a (Regulatory Particle 5a)%2C one of the six AAA-ATPases of the proteasome regulatory particle. Essential for gametophyte development. In Arabidopsis%2C the RPT5 subunit is encoded by two highly homologous genes%2C RPT5a and RPT5b. RPT5a and RPT5b show accession-dependent functional redundancy. In Wassilewskija (Ws) accession: mutant alleles of RPT5a displayed 50%25 pollen lethality%2C indicating that RPT5a is essential for male gametophyte development. In the Columbia (Col) accession%2C a rpt5a mutant allele did not display such a phenotype because the RPT5b Col allele complements the rpt5a defect in the male gametophyte%2C whereas the RPT5b Ws allele does not. Double rpt5a rpt5b mutants in Col background showed a complete male and female gametophyte lethal phenotype. regulatory particle triple-A ATPase 5A (RPT5A)%3B CONTAINS InterPro DOMAIN/s: ATPase%2C AAA+ type%2C core (InterPro:IPR003593)%2C ATPase%2C AAA-type%2C core (InterPro:IPR003959)%2C ATPase%2C AAA-type%2C conserved site (InterPro:IPR003960)%2C 26S proteasome subunit P45 (InterPro:IPR005937)%3B BEST Arabidopsis thaliana protein match is: 26S proteasome AAA-ATPase subunit RPT5B (TAIR:AT1G09100.1)%3B Has 33265 Blast hits to 30927 proteins in 3145 species: Archae - 1437%3B Bacteria - 12044%3B Metazoa - 4947%3B Fungi - 3672%3B Plants - 3322%3B Viruses - 56%3B Other Eukaryotes - 7787 (source: NCBI BLink). Chr3 + View
Corylus avellana Haze_04136 Similar to RPT5A: 26S proteasome regulatory subunit 6A homolog A (Arabidopsis thaliana OX%3D3702) 2 - View
Coffea canephora Cc02_g34180 26S protease regulatory subunit 6A homolog A chr2 + View
Carpinus fangiana Cfa006632 Cfa02 + View
Carya illinoinensis CiPaw.07G021800 K03065 - 26S proteasome regulatory subunit T5 (PSMC3, RPT5) Chr07 + View
Citrullus lanatus ClCG02G015290 26S protease regulatory subunit 6A-like protein CG_Chr02 + View
Cucumis melo MELO3C015296.2 26S protease regulatory subunit-like protein chr02 + View
Chenopodium quinoa AUR62000758 TBP1: 26S protease regulatory subunit 6A homolog C_Quinoa_Scaffold_2088 - View
Chenopodium quinoa AUR62005210 RPT5A: 26S protease regulatory subunit 6A homolog A C_Quinoa_Scaffold_3820 + View
Capsella rubella Carub.0003s0482 K03065 - 26S proteasome regulatory subunit T5 (PSMC3, RPT5) scaffold_3 + View
Cucumis sativus L. CsaV3_1G038720 26S proteasome regulatory subunit 6A homolog chr1 + View
Durio zibethinus Duzib177G0021 NW_019168004.1 + View
Durio zibethinus Duzib128G1473 NW_019168481.1 - View
Erigeron canadensis ECA236G1221 Conyza_canadensis_scaffold:3 + View
Eutrema salsugineum Thhalv10020798m.g K03065 - 26S proteasome regulatory subunit T5 (PSMC3, RPT5) scaffold_13 - View
Fragaria x ananassa FAN02G1474 PTHR23073:SF7 - 26S PROTEASE REGULATORY SUBUNIT 6A Fvb6-4 + View
Fragaria x ananassa FAN14G1978 PTHR23073:SF7 - 26S PROTEASE REGULATORY SUBUNIT 6A Fvb6-1 - View
Fragaria x ananassa FAN09G3411 PTHR23073:SF7 - 26S PROTEASE REGULATORY SUBUNIT 6A Fvb6-2 - View
Glycine max Glyma.19G232901 PTHR23073//PTHR23073:SF7 - 26S PROTEASE REGULATORY SUBUNIT // 26S PROTEASE REGULATORY SUBUNIT 6A Gm19 - View
Lotus japonicus Lj1g0008543 K03065 - 26S proteasome regulatory subunit T5 (PSMC3, RPT5) chr1 + View
Malus domestica MD12G1212500 regulatory particle triple-A ATPase 5A Chr12 - View
Manihot esculenta Manes.09G170700 Chromosome09 + View
Manihot esculenta Manes.08G117200 Chromosome08 - View
Olea europaea Oeu017261.1 chr15 + View
Salix brachista Sabra05G0030700 GWHAAZH00000005 - View
Sechium edule Sed0024433 LG11 - View
Sechium edule Sed0007718 LG03 - View
Theobroma cacao Thecc.05G313300 Regulatory particle triple-A ATPase 5A Chromosome_5 + View