Functional clusters
Information
- Type Gene Ontology
- Description cellular response to nitrate
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Beta vulgaris | Chr7_EL10_PGA_scaffold5 | 3 | CH_bvu_116 | 3 | 3 | 0.00000230274 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2493 | 3 | CH_cqu_233 | 3 | 4 | 0.00000296301 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2716 | 3 | CH_cqu_234 | 3 | 4 | 0.00000296301 |
| Helianthus annuus | HanXRQChr11 | 3 | CH_han_82 | 5 | 7 | 0.000000000000451916 |
| Solanum lycopersicum | SL4.0ch11 | 3 | CH_sly_191 | 3 | 3 | 0.000000434082 |
| Beta vulgaris | Chr7_EL10_PGA_scaffold5 | 4 | CH_bvu_116 | 3 | 3 | 0.00000230274 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2493 | 4 | CH_cqu_233 | 3 | 4 | 0.00000296301 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2716 | 4 | CH_cqu_234 | 3 | 4 | 0.00000296301 |
| Helianthus annuus | HanXRQChr11 | 4 | CH_han_82 | 5 | 7 | 0.000000000000451916 |
| Solanum lycopersicum | SL4.0ch11 | 4 | CH_sly_191 | 3 | 3 | 0.000000434082 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |