Functional clusters

Information

  • Type Gene Ontology
  • Description organellar ribosome

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_2 3 CH_aly_17 10 80 0.00000000000000163834
Brassica oleracea Boleracea_scaffold_29 3 CH_bol_17 13 76 7.14864e-19
Brassica oleracea Boleracea_scaffold_35 3 CH_bol_3 18 76 1.86835e-30
Capsicum annuum PGAv.1.6.scaffold438 3 CH_can_284 3 3 0.0000795428
Olea europaea chr19 3 CH_oeu_104 4 10 0.00000261696
Olea europaea chr14 3 CH_oeu_246 3 5 0.000173331
Sechium edule LG13 3 CH_sed_13 14 80 8.91164e-21
Arabidopsis lyrata scaffold_2 4 CH_aly_17 10 80 0.00000000000000163834
Brassica oleracea Boleracea_scaffold_29 4 CH_bol_17 13 76 7.14864e-19
Brassica oleracea Boleracea_scaffold_35 4 CH_bol_3 18 76 1.86835e-30
Capsicum annuum PGAv.1.6.scaffold438 4 CH_can_284 3 3 0.0000795428
Olea europaea chr19 4 CH_oeu_104 4 10 0.00000261696
Olea europaea chr14 4 CH_oeu_246 3 5 0.000173331
Sechium edule LG13 4 CH_sed_13 14 80 8.91164e-21

Available child term results

Ontology identifier Description Number of clusters
GO:0000311 plastid large ribosomal subunit 4
GO:0000312 plastid small ribosomal subunit 10
GO:0005761 mitochondrial ribosome 2
GO:0005762 mitochondrial large ribosomal subunit 8
GO:0005763 mitochondrial small ribosomal subunit 14
GO:0009547 plastid ribosome 76

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001