Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold7G03712 Striga asiatica HOM05D007365 ORTHO05D009309 5.6e-90 334.3 178 100.0
MSTRG.7141 Avicennia marina HOM05D007365 ORTHO05D009309 3.5e-44 182.2 200 57.5
Oeu057031.1 Olea europaea HOM05D007365 ORTHO05D009309 1.9e-42 176.4 142 66.9
unitig_37.g12181 Utricularia gibba HOM05D007365 ORTHO05D009309 1.1e-40 170.6 127 68.5
Thecc.06G237900 Theobroma cacao HOM05D007365 ORTHO05D009309 4.0e-40 168.7 114 74.6
QL05p068234 Quercus lobata HOM05D007365 ORTHO05D009309 5.3e-40 168.3 191 53.4
Duzib235G0282 Durio zibethinus HOM05D007365 ORTHO05D009309 9.0e-40 167.5 114 74.6
GSVIVG01003482001 Vitis vinifera HOM05D007365 ORTHO05D009309 1.5e-39 166.8 164 55.5
Eucgr.D01445 Eucalyptus grandis HOM05D007365 ORTHO05D009309 4.5e-39 165.2 121 71.1
Eucgr.L00170 Eucalyptus grandis HOM05D007365 ORTHO05D009309 4.5e-39 165.2 121 71.1
GSVIVG01004669001 Vitis vinifera HOM05D007365 ORTHO05D009309 4.5e-39 165.2 163 55.2
Prupe.4G006400 Prunus persica HOM05D007365 ORTHO05D009309 5.8e-39 164.9 133 63.9
TAR629G1651 Trochodendron aralioides HOM05D007365 ORTHO05D009309 5.8e-39 164.9 170 52.9
Haze_06998 Corylus avellana HOM05D007365 ORTHO05D009309 7.6e-39 164.5 114 71.9
Cfa000056 Carpinus fangiana HOM05D007365 ORTHO05D009309 1.7e-38 163.3 114 71.1
Migut.M01433 Erythranthe guttata HOM05D007365 ORTHO05D009309 2.2e-38 162.9 145 62.1
Manes.08G070500 Manihot esculenta HOM05D007365 ORTHO05D009309 2.2e-38 162.9 175 54.9
ClCG01G021340 Citrullus lanatus HOM05D007365 ORTHO05D009309 6.5e-38 161.4 109 71.6
Ciclev10016816m.g Citrus clementina HOM05D007365 ORTHO05D009309 6.5e-38 161.4 176 54.0
Lj2P258T31 Lonicera japonica HOM05D007365 ORTHO05D009309 1.1e-37 160.6 114 67.5
CAN.G1156.8 Capsicum annuum HOM05D007365 ORTHO05D009309 1.4e-37 160.2 112 70.5
CsaV3_6G048350 Cucumis sativus L. HOM05D007365 ORTHO05D009309 1.4e-37 160.2 108 72.2
FvH4_3g00530 Fragaria vesca HOM05D007365 ORTHO05D009309 1.9e-37 159.8 134 63.4
Gorai.010G189000 Gossypium raimondii HOM05D007365 ORTHO05D009309 1.9e-37 159.8 158 58.2
Nn1g07480 Nelumbo nucifera HOM05D007365 ORTHO05D009309 1.9e-37 159.8 172 54.7
Gohir.A06G155600 Gossypium hirsutum HOM05D007365 ORTHO05D009309 2.5e-37 159.5 114 71.1
Eucgr.D01449 Eucalyptus grandis HOM05D007365 ORTHO05D009309 4.2e-37 158.7 119 68.9
MELO3C007446.2 Cucumis melo HOM05D007365 ORTHO05D009309 5.5e-37 158.3 108 71.3
Sc05g0009760 Simmondsia chinensis HOM05D007365 ORTHO05D009309 5.5e-37 158.3 167 54.5
Gohir.D06G162000 Gossypium hirsutum HOM05D007365 ORTHO05D009309 9.3e-37 157.5 158 57.6
Solyc11g012640.1 Solanum lycopersicum HOM05D007365 ORTHO05D009309 9.3e-37 157.5 113 69.9
TPR.G5966 Trifolium pratense HOM05D007365 ORTHO05D009309 9.3e-37 157.5 113 68.1
Nitab4.5_0001668g0010 Nicotiana tabacum HOM05D007365 ORTHO05D009309 1.2e-36 157.1 172 52.3
CANSAT56G0830 Cannabis sativa HOM05D007365 ORTHO05D009309 2.1e-36 156.4 127 62.2
Rhsim13G0142400 Rhododendron simsii HOM05D007365 ORTHO05D009309 3.5e-36 155.6 112 68.8
Cc09_g00550 Coffea canephora HOM05D007365 ORTHO05D009309 7.9e-36 154.5 109 69.7
TWI63G0678 Tripterygium wilfordii HOM05D007365 ORTHO05D009309 7.9e-36 154.5 190 51.6
FAN21G3283 Fragaria x ananassa HOM05D007365 ORTHO05D009309 1.3e-35 153.7 174 51.7
Sopen11g007370 Solanum pennellii HOM05D007365 ORTHO05D009309 1.3e-35 153.7 113 68.1
PSO017G7035 Papaver somniferum HOM05D007365 ORTHO05D009309 1.8e-35 153.3 160 51.9
FAN25G1820 Fragaria x ananassa HOM05D007365 ORTHO05D009309 2.3e-35 152.9 174 51.1
Sabra06G0012500 Salix brachista HOM05D007365 ORTHO05D009309 3.0e-35 152.5 180 50.0
MD00G1057700 Malus domestica HOM05D007365 ORTHO05D009309 3.9e-35 152.1 178 51.7
PSO170G2578 Papaver somniferum HOM05D007365 ORTHO05D009309 3.9e-35 152.1 160 50.6
PGSC0003DMG400013294 Solanum tuberosum HOM05D007365 ORTHO05D009309 3.9e-35 152.1 113 68.1
THA.LOC104814483 Tarenaya hassleriana HOM05D007365 ORTHO05D009309 3.9e-35 152.1 169 50.9
Psat4g002120 Pisum sativum HOM05D007365 ORTHO05D009309 6.7e-35 151.4 111 66.7
RcHm_v2.0_Chr5g0000731 Rosa chinensis HOM05D007365 ORTHO05D009309 8.7e-35 151.0 109 69.7
Sed0008513 Sechium edule HOM05D007365 ORTHO05D009309 1.1e-34 150.6 164 51.2
CSS0050100 Camellia sinensis var. sinensis HOM05D007365 ORTHO05D009309 1.5e-34 150.2 112 68.8
PGR004G1025 Punica granatum HOM05D007365 ORTHO05D009309 1.5e-34 150.2 116 64.7
Carub.0007s2512 Capsella rubella HOM05D007365 ORTHO05D009309 2.5e-34 149.4 129 60.5
Potri.006G017500 Populus trichocarpa HOM05D007365 ORTHO05D009309 3.3e-34 149.1 149 53.7
CARHR222780 Cardamine hirsuta HOM05D007365 ORTHO05D009309 4.3e-34 148.7 177 48.0
MBI19_g37436_MAGBIO Magnolia biondii HOM05D007365 ORTHO05D009309 4.3e-34 148.7 175 52.6
Atru.chr1.2317 Acer truncatum HOM05D007365 ORTHO05D009309 5.7e-34 148.3 108 68.5
Ah.14g087440 Amaranthus hybridus HOM05D007365 ORTHO05D009309 5.7e-34 148.3 140 57.9
Aqoxy1G04233 Aquilegia oxysepala HOM05D007365 ORTHO05D009309 5.7e-34 148.3 143 56.6
Dinv15365 Davidia involucrata HOM05D007365 ORTHO05D009309 7.4e-34 147.9 97 77.3
Ca_21002_v3 Cicer arietinum L. HOM05D007365 ORTHO05D009309 9.7e-34 147.5 100 72.0
AT4G16410 Arabidopsis thaliana HOM05D007365 ORTHO05D009309 2.2e-33 146.4 175 49.1
Thhalv10026910m.g Eutrema salsugineum HOM05D007365 ORTHO05D009309 4.8e-33 145.2 137 57.7
Hma1.2p1_0657F.1_g196870 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 4.8e-33 145.2 109 66.1
Hma1.2p1_1963F.1_g309285 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 4.8e-33 145.2 109 66.1
HanXRQChr10g0285121 Helianthus annuus HOM05D007365 ORTHO05D009309 8.2e-33 144.4 114 60.5
Medtr4g133770 Medicago truncatula HOM05D007365 ORTHO05D009309 8.2e-33 144.4 110 65.5
ATR0624G051 Amborella trichopoda HOM05D007365 ORTHO05D009309 3.1e-32 142.5 108 63.9
C07p47850 Brassica napus HOM05D007365 ORTHO05D009309 3.1e-32 142.5 111 64.9
AL7G38600 Arabidopsis lyrata HOM05D007365 ORTHO05D009309 4.1e-32 142.1 174 50.0
TAR629G0160 Trochodendron aralioides HOM05D007365 ORTHO05D009309 5.3e-32 141.7 94 72.3
EL10Ac8g20243 Beta vulgaris HOM05D007365 ORTHO05D009309 6.9e-32 141.4 154 54.5
Phvul.003G085500 Phaseolus vulgaris HOM05D007365 ORTHO05D009309 6.9e-32 141.4 109 62.4
A03p49790 Brassica napus HOM05D007365 ORTHO05D009309 9.0e-32 141.0 111 64.0
BraA03t14074Z Brassica rapa HOM05D007365 ORTHO05D009309 9.0e-32 141.0 111 64.0
Lj4g0011771 Lotus japonicus HOM05D007365 ORTHO05D009309 9.0e-32 141.0 115 60.0
Cpa.g.sc1092.2 Carica papaya HOM05D007365 ORTHO05D009309 1.5e-31 140.2 187 44.9
Lalb_Chr07g0176961 Lupinus albus HOM05D007365 ORTHO05D009309 2.6e-31 139.4 106 66.0
HPP92_007730 Vanilla planifolia HOM05D007365 ORTHO05D009309 2.6e-31 139.4 175 45.1
Sp7g14940 Schrenkiella parvula HOM05D007365 ORTHO05D009309 3.4e-31 139.0 175 47.4
BolC7t45307H Brassica oleracea HOM05D007365 ORTHO05D009309 4.5e-31 138.7 161 48.4
DCAR_030849 Daucus carota HOM05D007365 ORTHO05D009309 1.0e-30 137.5 95 69.5
VMungo1215G0355 Vigna mungo HOM05D007365 ORTHO05D009309 2.2e-30 136.3 109 58.7
ECA248G3442 Erigeron canadensis HOM05D000864 ORTHO05D002353 2.9e-30 136.0 108 62.0
Glyma.17G007100 Glycine max HOM05D007365 ORTHO05D009309 2.9e-30 136.0 111 62.2
CiPaw.09G107000 Carya illinoinensis HOM05D007365 ORTHO05D009309 3.8e-30 135.6 142 52.8
Lsat_1_v5_gn_1_129921 Lactuca sativa HOM05D007365 ORTHO05D009309 6.1e-28 128.3 171 45.6
Hma1.2p1_0657F.1_g196860 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 1.3e-27 127.1 96 66.7
BraA01t02028Z Brassica rapa HOM05D007365 ORTHO05D009309 3.0e-27 125.9 93 65.6
CDE02G4560 Ceratophyllum demersum HOM05D007365 ORTHO05D009309 1.7e-25 120.2 149 47.7
Zm00001eb380530 Zea mays HOM05D007365 ORTHO05D009309 2.8e-25 119.4 102 60.8
Zm00001eb280810 Zea mays HOM05D007365 ORTHO05D009309 3.7e-25 119.0 102 60.8
Glyma.07G267200 Glycine max HOM05D007365 ORTHO05D009309 2.4e-24 116.3 98 63.3
SEGI_39039 Sequoiadendron giganteum HOM05D007365 ORTHO05D009309 2.0e-23 113.2 111 51.4
Peaxi162Scf00008g00111 Petunia axillaris HOM05D007365 ORTHO05D009309 2.2e-22 109.8 72 75.0
BcaNung00199 Brassica carinata HOM05D007365 ORTHO05D009309 2.5e-21 106.3 83 63.9
Os07g0607200 Oryza sativa ssp. japonica HOM05D007365 ORTHO05D009309 7.2e-21 104.8 74 70.3
Mapoly0009s0214 Marchantia polymorpha HOM05D007365 ORTHO05D009309 9.4e-21 104.4 83 51.8
C01p26480 Brassica napus HOM05D002647 ORTHO05D032546 2.1e-20 103.2 96 55.2
Aa31LG2G12470 Aethionema arabicum HOM05D002647 ORTHO05D000003 8.8e-19 97.8 126 45.2
BcaC09g50340 Brassica carinata HOM05D007365 ORTHO05D009309 8.8e-19 97.8 87 57.5
Pp3c8_24380 Physcomitrium patens HOM05D007365 ORTHO05D009309 8.8e-19 97.8 94 46.8
CBR_g31098 Chara braunii HOM05D000019 ORTHO05D000048 4.4e-18 95.5 84 54.8
MD10G1337000 Malus domestica HOM05D007365 ORTHO05D009309 3.1e-16 89.4 61 67.2
Actinidia02294 Actinidia chinensis HOM05D007365 ORTHO05D009309 1.4e-13 80.5 128 42.2
CsaV3_2G014000 Cucumis sativus L. HOM05D007365 ORTHO05D009309 1.3e-09 67.4 43 69.8
MELO3C035474.2 Cucumis melo HOM05D007365 ORTHO05D009309 1.2e-07 60.8 54 64.8
A01p21190 Brassica napus HOM05D007365 ORTHO05D009309 3.8e-06 55.8 135 34.1


User provided reference genes

Program Settings