Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold373G50183 Striga asiatica HOM05D007999 ORTHO05D000248 2.4e-60 235.3 120 100.0
MSTRG.5499 Avicennia marina HOM05D007999 ORTHO05D000248 5.9e-27 124.4 118 60.2
Migut.J00037 Erythranthe guttata HOM05D007999 ORTHO05D000248 1.0e-26 123.6 125 62.4
Oeu060433.1 Olea europaea HOM05D007999 ORTHO05D000248 1.8e-23 112.8 111 57.7
Haze_21176 Corylus avellana HOM05D007999 ORTHO05D000248 3.7e-21 105.1 120 50.8
Thecc.04G151500 Theobroma cacao HOM05D007999 ORTHO05D000248 4.8e-21 104.8 122 51.6
Actinidia11508 Actinidia chinensis HOM05D007999 ORTHO05D000248 1.1e-20 103.6 121 49.6
Cfa017033 Carpinus fangiana HOM05D007999 ORTHO05D000248 1.1e-20 103.6 123 48.0
Gohir.A03G087400 Gossypium hirsutum HOM05D007999 ORTHO05D000248 1.2e-19 100.1 124 49.2
Gohir.D02G108100 Gossypium hirsutum HOM05D007999 ORTHO05D000248 1.2e-19 100.1 124 49.2
Psat7g234760 Pisum sativum HOM05D007999 ORTHO05D000248 1.2e-19 100.1 119 49.6
COL.COLO4_06481 Corchorus olitorius HOM05D007752 ORTHO05D000248 2.7e-19 99.0 96 61.5
Gorai.005G122700 Gossypium raimondii HOM05D007999 ORTHO05D000248 2.7e-19 99.0 124 48.4
Medtr4g028110 Medicago truncatula HOM05D007999 ORTHO05D000248 3.5e-19 98.6 118 47.5
CiPaw.09G221400 Carya illinoinensis HOM05D007999 ORTHO05D000248 4.5e-19 98.2 129 46.5
SalBow8G1753 Salvia bowleyana HOM05D007999 ORTHO05D000248 7.7e-19 97.4 103 55.3
Lsat_1_v5_gn_8_107720 Lactuca sativa HOM05D007999 ORTHO05D000248 1.0e-18 97.1 123 48.0
Rhsim05G0230600 Rhododendron simsii HOM05D007999 ORTHO05D000248 1.3e-18 96.7 122 48.4
Manes.09G117900 Manihot esculenta HOM05D007999 ORTHO05D000248 2.2e-18 95.9 119 48.7
Potri.016G136800 Populus trichocarpa HOM05D007999 ORTHO05D000248 2.9e-18 95.5 137 46.0
QL07p032111 Quercus lobata HOM05D007999 ORTHO05D000248 2.9e-18 95.5 135 43.7
Dinv25344 Davidia involucrata HOM05D007999 ORTHO05D000248 5.0e-18 94.7 101 54.5
Hma1.2p1_0537F.1_g174340 Hydrangea macrophylla HOM05D007999 ORTHO05D000248 8.5e-18 94.0 98 55.1
Gohir.A10G150800 Gossypium hirsutum HOM05D007999 ORTHO05D000248 2.5e-17 92.4 120 45.0
Nitab4.5_0004433g0050 Nicotiana tabacum HOM05D007999 ORTHO05D000248 3.2e-17 92.0 124 44.4
Sabra04G0153500 Salix brachista HOM05D007999 ORTHO05D000248 3.2e-17 92.0 131 44.3
Nitab4.5_0000048g0020 Nicotiana tabacum HOM05D007999 ORTHO05D000248 5.5e-17 91.3 125 44.8
TPR.G5017 Trifolium pratense HOM05D007999 ORTHO05D000248 7.2e-17 90.9 117 47.0
Ca_26988_v3 Cicer arietinum L. HOM05D007999 ORTHO05D000248 1.6e-16 89.7 116 46.6
FAN02G1196 Fragaria x ananassa HOM05D007999 ORTHO05D000248 2.1e-16 89.4 125 44.0
FvH4_6g09860 Fragaria vesca HOM05D007999 ORTHO05D000248 3.6e-16 88.6 124 45.2
Gohir.D10G115500 Gossypium hirsutum HOM05D007999 ORTHO05D000248 6.1e-16 87.8 105 48.6
Gorai.011G127200 Gossypium raimondii HOM05D007999 ORTHO05D000248 6.1e-16 87.8 105 48.6
PGSC0003DMG400031466 Solanum tuberosum HOM05D007999 ORTHO05D000248 1.0e-15 87.0 118 42.4
Lalb_Chr03g0043771 Lupinus albus HOM05D007999 ORTHO05D000248 1.8e-15 86.3 130 43.1
TAR636G2047 Trochodendron aralioides HOM05D007999 ORTHO05D000248 1.8e-15 86.3 109 46.8
Phvul.010G070300 Phaseolus vulgaris HOM05D007999 ORTHO05D000248 4.0e-15 85.1 132 43.9
Ciclev10013035m.g Citrus clementina HOM05D007999 ORTHO05D000248 6.8e-15 84.3 134 41.8
Lalb_Chr07g0190371 Lupinus albus HOM05D007999 ORTHO05D000248 6.8e-15 84.3 120 45.0
Glyma.01G133200 Glycine max HOM05D007999 ORTHO05D000248 8.8e-15 84.0 136 41.2
TAR267G0002 Trochodendron aralioides HOM05D007999 ORTHO05D000248 8.8e-15 84.0 109 45.9
Lj1g0020119 Lotus japonicus HOM05D007999 ORTHO05D000248 1.2e-14 83.6 98 54.1
Solyc09g042230.2 Solanum lycopersicum HOM05D007999 ORTHO05D000248 1.5e-14 83.2 120 43.3
Glyma.03G034300 Glycine max HOM05D007999 ORTHO05D000248 7.5e-14 80.9 124 44.4
Lj3g0012389 Lotus japonicus HOM05D007999 ORTHO05D000248 9.8e-14 80.5 119 43.7
Prupe.6G293700 Prunus persica HOM05D007999 ORTHO05D000248 1.3e-13 80.1 113 42.5
RcHm_v2.0_Chr3g0460461 Rosa chinensis HOM05D007999 ORTHO05D000248 1.3e-13 80.1 129 41.9
VMungo0331G0380 Vigna mungo HOM05D007999 ORTHO05D000248 2.8e-13 79.0 131 41.2
Sopen09g015370 Solanum pennellii HOM05D007999 ORTHO05D000248 6.3e-13 77.8 108 47.2
Atru.chr8.114 Acer truncatum HOM05D007999 ORTHO05D000248 1.1e-12 77.0 146 37.0
VMungo1383G2835 Vigna mungo HOM05D007999 ORTHO05D000248 4.1e-12 75.1 108 44.4
ECA236G4781 Erigeron canadensis HOM05D007999 ORTHO05D000248 5.4e-12 74.7 86 48.8
Peaxi162Scf00732g00333 Petunia axillaris HOM05D007999 ORTHO05D000248 5.4e-12 74.7 111 41.4
Phvul.008G082700 Phaseolus vulgaris HOM05D007999 ORTHO05D000248 7.0e-12 74.3 113 46.0
Cpa.g.sc86.58 Carica papaya HOM05D007999 ORTHO05D000248 9.1e-12 73.9 87 49.4
ClCG10G022740 Citrullus lanatus HOM05D007999 ORTHO05D000248 9.1e-12 73.9 122 38.5
Psat3g118800 Pisum sativum HOM05D007999 ORTHO05D000248 1.2e-11 73.6 115 43.5
Actinidia29032 Actinidia chinensis HOM05D007752 ORTHO05D009994 2.7e-11 72.4 85 50.6
Nn2g10298 Nelumbo nucifera HOM05D007999 ORTHO05D000248 4.5e-11 71.6 111 45.0
TPR.G14122 Trifolium pratense HOM05D007999 ORTHO05D000248 4.5e-11 71.6 120 44.2
AUR62006417 Chenopodium quinoa HOM05D007752 ORTHO05D000248 7.7e-11 70.9 99 44.4
FAN09G1066 Fragaria x ananassa HOM05D007752 ORTHO05D009994 7.7e-11 70.9 100 41.0
MBI03_g22788_MAGBIO Magnolia biondii HOM05D007999 ORTHO05D000248 1.0e-10 70.5 76 56.6
EL10Ac7g17101 Beta vulgaris HOM05D007752 ORTHO05D000248 1.3e-10 70.1 91 46.2
Peaxi162Scf00732g00031 Petunia axillaris HOM05D007752 ORTHO05D000248 2.3e-10 69.3 84 45.2
FAN14G1029 Fragaria x ananassa HOM05D007752 ORTHO05D009994 3.8e-10 68.6 99 43.4
Sed0006729 Sechium edule HOM05D007999 ORTHO05D000248 3.8e-10 68.6 128 35.9
AUR62029765 Chenopodium quinoa HOM05D007752 ORTHO05D009994 6.6e-10 67.8 93 46.2
Oeu060211.1 Olea europaea HOM05D000784 ORTHO05D000248 1.1e-09 67.0 97 47.4
Medtr7g073270 Medicago truncatula HOM05D007999 ORTHO05D000248 1.5e-09 66.6 117 43.6
Oeu060213.1 Olea europaea HOM05D007999 ORTHO05D000248 2.5e-09 65.9 83 48.2
Aqoxy4G02427 Aquilegia oxysepala HOM05D007999 ORTHO05D000248 5.5e-09 64.7 116 39.7
Ah.08g209300 Amaranthus hybridus HOM05D007999 ORTHO05D000248 1.6e-08 63.2 108 34.3
Thhalv10006368m.g Eutrema salsugineum HOM05D007999 ORTHO05D000248 6.1e-08 61.2 116 38.8
unitig_749.g14092 Utricularia gibba HOM05D007999 ORTHO05D000248 6.1e-08 61.2 117 39.3
ATR1127G046 Amborella trichopoda HOM05D007999 ORTHO05D000248 6.8e-07 57.8 86 38.4
BcaC07g40025 Brassica carinata HOM05D007585 ORTHO05D009515 8.9e-07 57.4 114 37.7
C08p32430 Brassica napus HOM05D002367 ORTHO05D009515 8.9e-07 57.4 114 37.7
Sc20g0006970 Simmondsia chinensis HOM05D007999 ORTHO05D000248 1.5e-06 56.6 120 37.5
BolC8t50857H Brassica oleracea HOM05D007999 ORTHO05D000248 2.0e-06 56.2 113 38.1
Oeu057981.1 Olea europaea HOM05D007752 ORTHO05D009994 5.7e-06 54.7 87 40.2
BcaC07g40047 Brassica carinata HOM05D007585 ORTHO05D009515 7.5e-06 54.3 118 36.4
BcaC07g40077 Brassica carinata HOM05D007585 ORTHO05D009515 7.5e-06 54.3 118 36.4
A09p50020 Brassica napus HOM05D002367 ORTHO05D009515 7.5e-06 54.3 114 36.8
Carub.0005s2390 Capsella rubella HOM05D007999 ORTHO05D000248 7.5e-06 54.3 74 44.6
Sp5g05490 Schrenkiella parvula HOM05D007999 ORTHO05D000248 7.5e-06 54.3 78 43.6


User provided reference genes

Program Settings