Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold2G00947 Striga asiatica HOM05D003263 ORTHO05D004801 0.0e+00 1483.0 745 100.0
SGA_v2.0_scaffold108G30966 Striga asiatica HOM05D003263 ORTHO05D004801 0.0e+00 1314.3 744 87.4
Oeu030292.1 Olea europaea HOM05D003263 ORTHO05D004801 0.0e+00 1309.3 776 83.8
Migut.K00926 Erythranthe guttata HOM05D003263 ORTHO05D004801 0.0e+00 1308.9 744 87.0
MSTRG.15657 Avicennia marina HOM05D003263 ORTHO05D004801 0.0e+00 1305.4 746 86.3
MSTRG.3699 Avicennia marina HOM05D003263 ORTHO05D004801 0.0e+00 1305.4 741 87.3
SalBow5G3125 Salvia bowleyana HOM05D003263 ORTHO05D004801 0.0e+00 1300.4 745 86.3
Migut.H02232 Erythranthe guttata HOM05D003263 ORTHO05D004801 0.0e+00 1299.6 745 87.0
Actinidia35722 Actinidia chinensis HOM05D003263 ORTHO05D004801 0.0e+00 1281.2 747 84.9
HanXRQChr07g0191741 Helianthus annuus HOM05D003263 ORTHO05D004801 0.0e+00 1275.8 747 84.2
unitig_748.g8633 Utricularia gibba HOM05D003263 ORTHO05D004801 0.0e+00 1275.8 750 83.7
CAN.G222.62 Capsicum annuum HOM05D003263 ORTHO05D004801 0.0e+00 1270.8 746 84.2
Peaxi162Scf00464g00325 Petunia axillaris HOM05D003263 ORTHO05D004801 0.0e+00 1268.8 745 84.2
CSS0018871 Camellia sinensis var. sinensis HOM05D003263 ORTHO05D004801 0.0e+00 1266.5 745 84.2
Sopen11g006260 Solanum pennellii HOM05D003263 ORTHO05D004801 0.0e+00 1265.8 747 84.5
Dinv19049 Davidia involucrata HOM05D003263 ORTHO05D004801 0.0e+00 1265.0 750 84.8
Nitab4.5_0011135g0010 Nicotiana tabacum HOM05D003263 ORTHO05D004801 0.0e+00 1265.0 745 84.6
MD09G1268900 Malus domestica HOM05D003263 ORTHO05D004801 0.0e+00 1264.6 750 83.2
HanXRQChr14g0444641 Helianthus annuus HOM05D003263 ORTHO05D004801 0.0e+00 1263.8 746 84.0
Solyc11g011470.2 Solanum lycopersicum HOM05D003263 ORTHO05D004801 0.0e+00 1262.7 748 84.1
Prupe.3G165400 Prunus persica HOM05D003263 ORTHO05D004801 0.0e+00 1261.1 749 83.0
ClCG05G010610 Citrullus lanatus HOM05D003263 ORTHO05D004801 0.0e+00 1260.0 748 83.7
CiPaw.03G074100 Carya illinoinensis HOM05D003263 ORTHO05D004801 0.0e+00 1259.6 750 83.7
PGSC0003DMG400013309 Solanum tuberosum HOM05D003263 ORTHO05D004801 0.0e+00 1259.6 747 84.1
Manes.02G078500 Manihot esculenta HOM05D003263 ORTHO05D004801 0.0e+00 1255.7 746 83.1
Sed0005557 Sechium edule HOM05D003263 ORTHO05D004801 0.0e+00 1255.4 746 82.8
Potri.004G082800 Populus trichocarpa HOM05D003263 ORTHO05D004801 0.0e+00 1255.0 744 83.1
ECA238G3173 Erigeron canadensis HOM05D003263 ORTHO05D004801 0.0e+00 1253.4 748 83.0
Ciclev10019002m.g Citrus clementina HOM05D003263 ORTHO05D004801 0.0e+00 1253.0 746 83.6
CsaV3_3G017880 Cucumis sativus L. HOM05D003263 ORTHO05D004801 0.0e+00 1252.7 750 82.7
MD17G1267300 Malus domestica HOM05D003263 ORTHO05D004801 0.0e+00 1251.5 750 82.1
Potri.017G136133 Populus trichocarpa HOM05D003263 ORTHO05D004801 0.0e+00 1250.0 745 83.0
Atru.chr1.2038 Acer truncatum HOM05D003263 ORTHO05D004801 0.0e+00 1249.2 748 83.4
MELO3C020331.2 Cucumis melo HOM05D003263 ORTHO05D004801 0.0e+00 1248.0 750 82.3
arahy.Tifrunner.gnm1.ann1.AUXW6G Arachis hypogaea HOM05D003263 ORTHO05D004801 0.0e+00 1243.8 746 82.8
TAR629G0765 Trochodendron aralioides HOM05D003263 ORTHO05D004801 0.0e+00 1243.0 749 82.8
Sed0016313 Sechium edule HOM05D003263 ORTHO05D004801 0.0e+00 1241.5 746 82.3
TWI77G0544 Tripterygium wilfordii HOM05D003263 ORTHO05D004801 0.0e+00 1237.6 748 82.5
Eucgr.J01621 Eucalyptus grandis HOM05D003263 ORTHO05D004801 0.0e+00 1236.9 747 81.4
Lj6g0025109 Lotus japonicus HOM05D003263 ORTHO05D004801 0.0e+00 1236.9 748 82.6
FAN23G0774 Fragaria x ananassa HOM05D003263 ORTHO05D004801 0.0e+00 1236.1 747 82.6
Cpa.g.sc116.77 Carica papaya HOM05D003263 ORTHO05D004801 0.0e+00 1235.7 746 81.2
PGR042G3530 Punica granatum HOM05D003263 ORTHO05D004801 0.0e+00 1235.7 746 81.5
Rhsim08G0019700 Rhododendron simsii HOM05D003263 ORTHO05D004801 0.0e+00 1234.2 799 78.1
FAN26G0816 Fragaria x ananassa HOM05D003263 ORTHO05D004801 0.0e+00 1233.8 746 82.3
RcHm_v2.0_Chr3g0491991 Rosa chinensis HOM05D003263 ORTHO05D004801 0.0e+00 1233.4 749 82.0
Lsat_1_v5_gn_3_63961 Lactuca sativa HOM05D003263 ORTHO05D004801 0.0e+00 1232.2 747 81.5
Haze_14285 Corylus avellana HOM05D003263 ORTHO05D004801 0.0e+00 1229.9 746 82.3
TWI74G0116 Tripterygium wilfordii HOM05D003263 ORTHO05D004801 0.0e+00 1229.5 748 81.8
Glyma.18G041700 Glycine max HOM05D003263 ORTHO05D004801 0.0e+00 1227.2 749 81.3
Cfa007786 Carpinus fangiana HOM05D003263 ORTHO05D004801 0.0e+00 1226.5 746 82.0
Glyma.11G214800 Glycine max HOM05D003263 ORTHO05D004801 0.0e+00 1226.5 748 81.3
DCAR_014159 Daucus carota HOM05D003263 ORTHO05D004801 0.0e+00 1223.4 746 81.8
VMungo1383G2082 Vigna mungo HOM05D003263 ORTHO05D004801 0.0e+00 1222.2 749 81.3
FvH4_1g30070 Fragaria vesca HOM05D003263 ORTHO05D004801 0.0e+00 1221.8 745 82.0
CANSAT56G4352 Cannabis sativa HOM05D003263 ORTHO05D004801 0.0e+00 1220.3 749 81.3
TPR.G23206 Trifolium pratense HOM05D003263 ORTHO05D004801 0.0e+00 1219.1 746 81.4
PSO478G1645 Papaver somniferum HOM05D003263 ORTHO05D004801 0.0e+00 1218.8 761 80.2
Aqoxy3G04075 Aquilegia oxysepala HOM05D003263 ORTHO05D004801 0.0e+00 1217.2 759 80.5
QL02p059434 Quercus lobata HOM05D003263 ORTHO05D004801 0.0e+00 1217.2 746 81.4
Phvul.001G229000 Phaseolus vulgaris HOM05D003263 ORTHO05D004801 0.0e+00 1216.1 747 81.1
FAN19G0316 Fragaria x ananassa HOM05D003263 ORTHO05D004801 0.0e+00 1215.3 715 83.5
Ca_17086_v3 Cicer arietinum L. HOM05D003263 ORTHO05D004801 0.0e+00 1214.5 747 80.9
PSO017G4553 Papaver somniferum HOM05D003263 ORTHO05D004801 0.0e+00 1214.5 758 80.1
Gohir.D07G183900 Gossypium hirsutum HOM05D003263 ORTHO05D004801 0.0e+00 1213.7 748 81.3
COL.COLO4_13315 Corchorus olitorius HOM05D003263 ORTHO05D004801 0.0e+00 1209.9 746 81.4
Duzib138G0925 Durio zibethinus HOM05D003263 ORTHO05D004801 0.0e+00 1206.8 747 80.9
Duzib133G1400 Durio zibethinus HOM05D003263 ORTHO05D004801 0.0e+00 1206.4 748 80.6
AUR62037782 Chenopodium quinoa HOM05D003263 ORTHO05D004801 0.0e+00 1206.0 752 79.4
Gorai.001G204300 Gossypium raimondii HOM05D003263 ORTHO05D004801 0.0e+00 1205.7 747 80.9
Lalb_Chr18g0053541 Lupinus albus HOM05D003263 ORTHO05D004801 0.0e+00 1205.7 748 79.9
Thecc.04G063600 Theobroma cacao HOM05D003263 ORTHO05D004801 0.0e+00 1205.7 748 81.0
Psat5g119880 Pisum sativum HOM05D003263 ORTHO05D004801 0.0e+00 1205.3 748 80.1
Ah.10g032470 Amaranthus hybridus HOM05D003263 ORTHO05D004801 0.0e+00 1204.9 741 79.8
THA.LOC104805635 Tarenaya hassleriana HOM05D003263 ORTHO05D004801 0.0e+00 1204.9 748 80.2
Ah.10g032480 Amaranthus hybridus HOM05D003263 ORTHO05D004801 0.0e+00 1202.2 747 79.8
Manes.01G120700 Manihot esculenta HOM05D003263 ORTHO05D004801 0.0e+00 1199.9 746 80.8
Medtr3g065130 Medicago truncatula HOM05D003263 ORTHO05D004801 0.0e+00 1199.1 748 80.1
Gohir.A07G176600 Gossypium hirsutum HOM05D003263 ORTHO05D004801 0.0e+00 1197.2 747 80.3
THA.LOC104822242 Tarenaya hassleriana HOM05D003263 ORTHO05D004801 0.0e+00 1196.0 748 79.0
EL10Ac2g03207 Beta vulgaris HOM05D003263 ORTHO05D004801 0.0e+00 1195.3 751 79.1
BcaB06g27086 Brassica carinata HOM05D003263 ORTHO05D004801 0.0e+00 1194.9 748 79.1
Gorai.001G197100 Gossypium raimondii HOM05D003263 ORTHO05D004801 0.0e+00 1193.3 748 79.7
C04p44380 Brassica napus HOM05D003263 ORTHO05D004801 0.0e+00 1192.6 748 79.0
A04p10660 Brassica napus HOM05D003263 ORTHO05D004801 0.0e+00 1192.2 748 79.0
BraA04t16733Z Brassica rapa HOM05D003263 ORTHO05D004801 0.0e+00 1191.4 748 78.9
CARHR215400 Cardamine hirsuta HOM05D003263 ORTHO05D004801 0.0e+00 1190.3 747 79.0
Cc07_g13220 Coffea canephora HOM05D003263 ORTHO05D004801 0.0e+00 1189.9 658 88.1
Thhalv10027640m.g Eutrema salsugineum HOM05D003263 ORTHO05D004801 0.0e+00 1189.1 748 78.7
BcaC02g09578 Brassica carinata HOM05D003263 ORTHO05D004801 0.0e+00 1187.9 748 78.7
BolC4t26009H Brassica oleracea HOM05D003263 ORTHO05D004801 0.0e+00 1187.9 748 78.7
arahy.Tifrunner.gnm1.ann1.ZZ0CH2 Arachis hypogaea HOM05D003263 ORTHO05D004801 0.0e+00 1187.2 843 73.0
AT5G37510 Arabidopsis thaliana HOM05D003263 ORTHO05D004801 0.0e+00 1182.9 747 78.2
Aa31LG9G17530 Aethionema arabicum HOM05D003263 ORTHO05D004801 0.0e+00 1182.5 746 78.3
Sc14g0006900 Simmondsia chinensis HOM05D003263 ORTHO05D004801 0.0e+00 1182.5 745 78.7
Zm00001eb216210 Zea mays HOM05D003263 ORTHO05D004801 0.0e+00 1179.5 742 79.2
Hund13092 Selenicereus undatus HOM05D003263 ORTHO05D004801 0.0e+00 1179.1 699 81.8
AL1G43210 Arabidopsis lyrata HOM05D003263 ORTHO05D004801 0.0e+00 1175.2 745 78.0
Zm00001eb055050 Zea mays HOM05D003263 ORTHO05D004801 0.0e+00 1174.8 743 79.4
Carub.0007s3268 Capsella rubella HOM05D003263 ORTHO05D004801 0.0e+00 1174.1 747 77.4
Aa31LG9G17520 Aethionema arabicum HOM05D003263 ORTHO05D004801 0.0e+00 1171.8 752 77.3
Os03g0713400 Oryza sativa ssp. japonica HOM05D003263 ORTHO05D004801 0.0e+00 1169.5 721 80.2
Nitab4.5_0006562g0010 Nicotiana tabacum HOM05D003263 ORTHO05D004801 0.0e+00 1167.5 666 86.8
AL7G46270 Arabidopsis lyrata HOM05D003263 ORTHO05D004801 0.0e+00 1163.7 780 74.9
HPP92_020298 Vanilla planifolia HOM05D003263 ORTHO05D004801 0.0e+00 1160.2 723 79.0
AUR62042225 Chenopodium quinoa HOM05D003263 ORTHO05D004801 0.0e+00 1146.7 751 76.3
Lalb_Chr15g0085021 Lupinus albus HOM05D003263 ORTHO05D004801 0.0e+00 1143.6 747 77.0
CDE05G1320 Ceratophyllum demersum HOM05D003263 ORTHO05D004801 0.0e+00 1142.9 722 78.3
SHI30113 Sapria himalayana HOM05D003263 ORTHO05D004801 0.0e+00 1130.5 746 76.4
vmacro18524 Vaccinium macrocarpon HOM05D003263 ORTHO05D004801 0.0e+00 1116.3 747 76.4
Gohir.D07G176300 Gossypium hirsutum HOM05D003263 ORTHO05D004801 0.0e+00 1109.4 658 82.7
Gohir.A07G170100 Gossypium hirsutum HOM05D003263 ORTHO05D004801 0.0e+00 1107.8 658 82.7
ATR0118G003 Amborella trichopoda HOM05D003263 ORTHO05D004801 0.0e+00 1102.8 721 75.9
MBI19_g09384_MAGBIO Magnolia biondii HOM05D003263 ORTHO05D004801 0.0e+00 1094.0 1055 57.5
CDE05G1041 Ceratophyllum demersum HOM05D003263 ORTHO05D004801 0.0e+00 1081.2 722 74.4
GSVIVG01030914001 Vitis vinifera HOM05D003263 ORTHO05D004801 0.0e+00 1075.5 660 81.1
Nn4g24447 Nelumbo nucifera HOM05D003263 ORTHO05D004801 1.3e-310 1069.3 622 84.7
Dinv28178 Davidia involucrata HOM05D003263 ORTHO05D004801 5.6e-301 1037.3 750 73.1
SMO331G0029 Selaginella moellendorffii HOM05D003263 ORTHO05D004801 4.0e-283 978.0 679 68.5
AagrBONN_evm.TU.Sc2ySwM_228.2430 Anthoceros agrestis HOM05D003263 ORTHO05D004801 2.6e-282 975.3 678 69.8
Mapoly0153s0030 Marchantia polymorpha HOM05D003263 ORTHO05D004801 5.6e-277 957.6 677 68.4
Pp3c1_34100 Physcomitrium patens HOM05D003263 ORTHO05D004801 1.2e-274 949.9 676 68.8
Pp3c1_34110 Physcomitrium patens HOM05D003263 ORTHO05D004801 1.2e-274 949.9 676 68.8
Pp3c1_34140 Physcomitrium patens HOM05D003263 ORTHO05D004801 4.5e-274 948.0 676 68.6
Pp3c19_19270 Physcomitrium patens HOM05D003263 ORTHO05D004801 7.6e-274 947.2 723 65.7
arahy.Tifrunner.gnm1.ann1.5H82NF Arachis hypogaea HOM05D003263 ORTHO05D004801 6.7e-254 880.9 599 74.3
arahy.Tifrunner.gnm1.ann1.RIP12T Arachis hypogaea HOM05D003263 ORTHO05D004801 2.6e-250 869.0 599 73.8
CBR_g6354 Chara braunii HOM05D003263 ORTHO05D004801 1.0e-249 867.1 678 61.8
Cre12.g535950 Chlamydomonas reinhardtii HOM05D003263 ORTHO05D004801 6.7e-230 801.2 679 57.6
MCO08G340 Micromonas commoda HOM05D003263 ORTHO05D004801 3.2e-224 782.3 705 57.2
PRCOL_00000346 Prasinoderma coloniale HOM05D003263 ORTHO05D004801 1.8e-211 740.0 677 56.3
TAR371G0371 Trochodendron aralioides HOM05D003263 ORTHO05D004801 5.2e-206 721.8 673 60.2
Cfa025667 Carpinus fangiana HOM05D003263 ORTHO05D004801 2.0e-197 693.3 676 52.5
Haze_26802 Corylus avellana HOM05D003263 ORTHO05D004801 1.1e-171 607.8 711 46.4
Oeu062704.1 Olea europaea HOM05D003263 ORTHO05D004801 1.1e-168 597.8 319 91.8
SpUN1596_0010 Schrenkiella parvula HOM05D003263 ORTHO05D004801 9.0e-158 561.6 305 87.5
arahy.Tifrunner.gnm1.ann1.HY7M04 Arachis hypogaea HOM05D000164 ORTHO05D004801 3.4e-157 559.7 361 75.6
Thecc.K0008100 Theobroma cacao HOM05D003263 ORTHO05D004801 7.6e-141 505.4 301 85.7
arahy.Tifrunner.gnm1.ann1.Z93KCA Arachis hypogaea HOM05D003263 ORTHO05D004801 3.1e-134 483.4 301 81.1
Oeu062706.1 Olea europaea HOM05D003263 ORTHO05D004801 7.9e-130 468.8 308 75.3
Potri.017G136950 Populus trichocarpa HOM05D003263 ORTHO05D004801 2.7e-114 417.2 237 84.8
SpUn1854_0010 Schrenkiella parvula HOM05D003263 ORTHO05D004801 4.4e-112 409.8 294 68.7
Sabra17G0054900 Salix brachista HOM05D003263 ORTHO05D004801 1.2e-101 375.2 241 77.2
Thecc.K0008200 Theobroma cacao HOM05D003263 ORTHO05D004801 2.6e-96 357.5 219 79.5
CSS0049015 Camellia sinensis var. sinensis HOM05D003263 ORTHO05D004801 8.9e-89 332.4 300 61.0
CSS0039899 Camellia sinensis var. sinensis HOM05D003263 ORTHO05D004801 7.0e-86 322.8 297 59.6
Eucgr.J01637 Eucalyptus grandis HOM05D003263 ORTHO05D004801 3.5e-85 320.5 222 74.3
Oeu039332.1 Olea europaea HOM05D003263 ORTHO05D004801 3.0e-76 290.8 178 79.8
Actinidia28797 Actinidia chinensis HOM05D003263 ORTHO05D004801 8.3e-71 272.7 399 45.9
arahy.Tifrunner.gnm1.ann1.VKQW11 Arachis hypogaea HOM05D003263 ORTHO05D004801 3.1e-65 254.2 126 95.2
Haze_27240 Corylus avellana HOM05D003263 ORTHO05D004801 3.4e-64 250.8 370 38.6
SEGI_21193 Sequoiadendron giganteum HOM05D003263 ORTHO05D004801 1.3e-63 248.8 162 77.2
MD16G1264300 Malus domestica HOM05D003263 ORTHO05D004801 2.7e-61 241.1 260 52.7
arahy.Tifrunner.gnm1.ann1.SN393R Arachis hypogaea HOM05D003263 ORTHO05D004801 2.8e-58 231.1 114 94.7
HanXRQChr17g0559491 Helianthus annuus HOM05D003263 ORTHO05D004801 3.5e-53 214.2 138 79.0
SEGI_05320 Sequoiadendron giganteum HOM05D003263 ORTHO05D004801 1.6e-45 188.7 117 78.6
Sabra17G0112400 Salix brachista HOM05D003263 ORTHO05D003497 4.0e-41 174.1 122 71.3
SEGI_04560 Sequoiadendron giganteum HOM05D003263 ORTHO05D004801 5.3e-41 173.7 155 60.6
Migut.M00197 Erythranthe guttata HOM05D003263 ORTHO05D004801 3.2e-38 164.5 124 70.2
QL04p097132 Quercus lobata HOM05D003263 ORTHO05D000041 3.0e-36 157.9 94 79.8
VMungo0647G1524 Vigna mungo HOM05D003263 ORTHO05D004801 2.8e-34 151.4 102 65.7
CBR_g44347 Chara braunii HOM05D003263 ORTHO05D004801 1.5e-32 145.6 141 52.5
Ca_19082_v3 Cicer arietinum L. HOM05D003263 ORTHO05D004801 9.3e-30 136.3 83 79.5
Cc04_g05630 Coffea canephora HOM05D003263 ORTHO05D004801 1.2e-29 136.0 137 55.5
Hund13091 Selenicereus undatus HOM05D003263 ORTHO05D004801 4.3e-27 127.5 105 60.0
MD16G1264400 Malus domestica HOM05D003263 ORTHO05D004801 8.2e-26 123.2 61 91.8
Hma1.2p1_1425F.1_g282850 Hydrangea macrophylla HOM05D003263 ORTHO05D004801 4.5e-24 117.5 99 63.6
CBR_g26339 Chara braunii HOM05D004987 ORTHO05D005960 4.9e-23 114.0 220 30.9
CSS0022568 Camellia sinensis var. sinensis HOM05D003263 ORTHO05D004801 9.3e-22 109.8 138 50.0
QL08p053439 Quercus lobata HOM05D003263 ORTHO05D004801 1.7e-15 89.0 50 80.0
TPR.G18971 Trifolium pratense HOM05D003263 ORTHO05D004801 7.2e-14 83.6 56 73.2
SEGI_40032 Sequoiadendron giganteum HOM05D003263 ORTHO05D024792 2.3e-12 78.6 42 88.1
TPR.G11234 Trifolium pratense HOM05D003263 ORTHO05D004801 3.3e-11 74.7 42 85.7
Cc00_g06720 Coffea canephora HOM05D003263 ORTHO05D004801 1.7e-10 72.4 38 92.1


User provided reference genes

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