Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold134G34708 Striga asiatica HOM05D017409 ORTHO05D000126 4.4e-101 371.3 191 100.0
SGA_v2.0_scaffold7G03666 Striga asiatica HOM05D000198 ORTHO05D005702 1.5e-11 73.9 129 34.9
SGA_v2.0_scaffold250G45022 Striga asiatica HOM05D000003 ORTHO05D000004 7.2e-11 71.6 103 37.9
SGA_v2.0_scaffold9G04785 Striga asiatica HOM05D017409 ORTHO05D000126 2.1e-10 70.1 151 33.8
Nitab4.5_0003490g0060 Nicotiana tabacum HOM05D000003 ORTHO05D000126 1.2e-08 64.3 81 35.8
Nitab4.5_0003032g0050 Nicotiana tabacum HOM05D000003 ORTHO05D000126 2.8e-07 59.7 79 39.2
SGA_v2.0_scaffold17G08062 Striga asiatica HOM05D000003 ORTHO05D000006 3.7e-07 59.3 89 34.8
Nitab4.5_0001238g0080 Nicotiana tabacum HOM05D000003 ORTHO05D000126 4.8e-07 58.9 78 34.6
Cc00_g29920 Coffea canephora HOM05D000003 ORTHO05D000126 6.3e-07 58.5 88 31.8
Nitab4.5_0013082g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000126 1.1e-06 57.8 121 28.9
SGA_v2.0_scaffold4G02180 Striga asiatica HOM05D000688 ORTHO05D004737 1.1e-06 57.8 75 41.3
Nitab4.5_0011919g0010 Nicotiana tabacum HOM05D007931 ORTHO05D000126 1.4e-06 57.4 78 33.3
Nitab4.5_0005843g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.8e-06 57.0 79 36.7
Nitab4.5_0012359g0030 Nicotiana tabacum HOM05D000003 ORTHO05D000126 1.8e-06 57.0 78 34.6
PGSC0003DMG400020793 Solanum tuberosum HOM05D000003 ORTHO05D000126 1.8e-06 57.0 79 31.6
SGA_v2.0_scaffold151G36755 Striga asiatica HOM05D000003 ORTHO05D000004 5.4e-06 55.5 82 32.9


User provided reference genes

Program Settings