Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold111G31522 Striga asiatica HOM05D005650 ORTHO05D007020 0.0e+00 1223.0 612 100.0
SalBow3G3602 Salvia bowleyana HOM05D005650 ORTHO05D007020 2.5e-251 872.1 537 78.8
MSTRG.23341 Avicennia marina HOM05D005650 ORTHO05D007020 1.1e-243 846.7 532 78.8
Nitab4.5_0002337g0070 Nicotiana tabacum HOM05D005650 ORTHO05D007020 2.6e-227 792.3 535 74.2
Atru.chr11.825 Acer truncatum HOM05D005650 ORTHO05D007020 9.8e-227 790.4 533 72.4
GSVIVG01011626001 Vitis vinifera HOM05D005650 ORTHO05D007020 1.8e-225 786.2 534 73.2
Thecc.02G307700 Theobroma cacao HOM05D005650 ORTHO05D007020 3.5e-224 781.9 533 72.4
Cc11_g06590 Coffea canephora HOM05D005650 ORTHO05D007020 1.7e-223 779.6 534 72.5
Duzib251G0272 Durio zibethinus HOM05D005650 ORTHO05D007020 6.5e-223 777.7 534 72.3
Gohir.D02G136500 Gossypium hirsutum HOM05D005650 ORTHO05D007020 6.5e-223 777.7 533 72.0
Gorai.005G152600 Gossypium raimondii HOM05D005650 ORTHO05D007020 6.5e-223 777.7 533 72.0
CSS0031782 Camellia sinensis var. sinensis HOM05D005650 ORTHO05D007020 1.9e-222 776.2 533 71.9
Migut.H02363 Erythranthe guttata HOM05D005650 ORTHO05D007020 2.5e-222 775.8 532 73.7
Eucgr.B02693 Eucalyptus grandis HOM05D005650 ORTHO05D007020 1.2e-221 773.5 533 71.5
Dinv26372 Davidia involucrata HOM05D005650 ORTHO05D007020 1.0e-220 770.4 533 71.1
Actinidia12402 Actinidia chinensis HOM05D005650 ORTHO05D007020 5.7e-219 764.6 533 71.1
Sopen02g013060 Solanum pennellii HOM05D005650 ORTHO05D007020 7.5e-219 764.2 531 73.3
Hma1.2p1_0192F.1_g083470 Hydrangea macrophylla HOM05D005650 ORTHO05D007020 1.3e-218 763.5 533 71.1
Solyc02g062110.4 Solanum lycopersicum HOM05D005650 ORTHO05D007020 1.1e-217 760.4 531 72.7
Duzib248G0273 Durio zibethinus HOM05D005650 ORTHO05D007020 7.0e-217 757.7 533 70.9
Haze_10848 Corylus avellana HOM05D005650 ORTHO05D007020 3.5e-216 755.4 533 70.0
CAN.G1206.2 Capsicum annuum HOM05D005650 ORTHO05D007020 5.9e-216 754.6 531 72.5
TAR622G0850 Trochodendron aralioides HOM05D005650 ORTHO05D007020 1.7e-215 753.1 534 70.4
Ciclev10014948m.g Citrus clementina HOM05D005650 ORTHO05D007020 1.1e-214 750.4 533 70.7
Potri.008G137000 Populus trichocarpa HOM05D005650 ORTHO05D007020 1.1e-214 750.4 534 70.0
Manes.15G123300 Manihot esculenta HOM05D005650 ORTHO05D007020 3.3e-214 748.8 533 70.5
Gohir.A03G112000 Gossypium hirsutum HOM05D005650 ORTHO05D007020 7.3e-214 747.7 533 69.8
QL03p037983 Quercus lobata HOM05D005650 ORTHO05D007020 1.2e-213 746.9 533 69.8
Cfa015047 Carpinus fangiana HOM05D005650 ORTHO05D007020 1.4e-212 743.4 533 69.4
MD13G1018100 Malus domestica HOM05D005650 ORTHO05D007020 1.2e-211 740.3 536 70.9
Prupe.7G053000 Prunus persica HOM05D005650 ORTHO05D007020 1.5e-211 740.0 537 69.8
Nn8g41275 Nelumbo nucifera HOM05D005650 ORTHO05D007020 9.8e-211 737.3 535 69.5
DCAR_023564 Daucus carota HOM05D005650 ORTHO05D007020 6.4e-210 734.6 534 68.5
CANSAT78G2020 Cannabis sativa HOM05D005650 ORTHO05D007020 1.4e-209 733.4 536 69.2
MD16G1016000 Malus domestica HOM05D005650 ORTHO05D007020 4.1e-209 731.9 536 69.6
arahy.Tifrunner.gnm1.ann1.L5UDEC Arachis hypogaea HOM05D005650 ORTHO05D007020 5.4e-209 731.5 535 66.7
FvH4_4g33280 Fragaria vesca HOM05D005650 ORTHO05D007020 1.2e-208 730.3 535 68.6
TWI74G1652 Tripterygium wilfordii HOM05D005650 ORTHO05D007020 7.8e-208 727.6 535 67.5
unitig_21.g20969 Utricularia gibba HOM05D005650 ORTHO05D007020 1.7e-207 726.5 542 67.3
RcHm_v2.0_Chr4g0442431 Rosa chinensis HOM05D005650 ORTHO05D007020 3.0e-207 725.7 536 68.7
Aqoxy2G00265 Aquilegia oxysepala HOM05D005650 ORTHO05D007020 2.5e-206 722.6 537 68.9
Glyma.08G047900 Glycine max HOM05D005650 ORTHO05D007020 2.5e-206 722.6 531 68.4
Rhsim09G0087900 Rhododendron simsii HOM05D005650 ORTHO05D007020 2.8e-205 719.2 523 68.6
Sabra08G0104500 Salix brachista HOM05D005650 ORTHO05D007020 3.6e-205 718.8 586 63.1
CiPaw.06G055300 Carya illinoinensis HOM05D005650 ORTHO05D007020 4.7e-205 718.4 533 66.8
Medtr8g105900 Medicago truncatula HOM05D005650 ORTHO05D007020 1.8e-204 716.5 533 66.8
Sc14g0006580 Simmondsia chinensis HOM05D005650 ORTHO05D007020 5.2e-204 714.9 534 67.2
Nitab4.5_0000188g0130 Nicotiana tabacum HOM05D005650 ORTHO05D007020 1.5e-203 713.4 523 69.8
ECA234G4226 Erigeron canadensis HOM05D005650 ORTHO05D007020 5.8e-203 711.4 539 67.0
Glyma.05G240900 Glycine max HOM05D005650 ORTHO05D007020 2.9e-202 709.1 527 66.8
Lsat_1_v5_gn_4_23420 Lactuca sativa HOM05D005650 ORTHO05D007020 2.9e-202 709.1 536 66.8
PSO782G4204 Papaver somniferum HOM05D005650 ORTHO05D007020 8.3e-202 707.6 535 66.7
PSO063G5777 Papaver somniferum HOM05D005650 ORTHO05D007020 2.4e-201 706.1 535 66.7
Phvul.011G008500 Phaseolus vulgaris HOM05D005650 ORTHO05D007020 1.3e-199 700.3 523 67.3
HanXRQChr17g0565991 Helianthus annuus HOM05D005650 ORTHO05D007020 6.6e-199 698.0 547 65.3
Lj4g0026003 Lotus japonicus HOM05D005650 ORTHO05D007020 8.6e-199 697.6 533 65.5
AUR62036082 Chenopodium quinoa HOM05D005650 ORTHO05D007020 1.6e-197 693.3 531 64.2
arahy.Tifrunner.gnm1.ann1.NIUA4E Arachis hypogaea HOM05D005650 ORTHO05D007020 4.7e-197 691.8 576 60.9
Hund07852 Selenicereus undatus HOM05D005650 ORTHO05D007020 6.2e-197 691.4 534 65.7
Psat4g004560 Pisum sativum HOM05D005650 ORTHO05D007020 1.2e-195 687.2 533 64.5
AUR62035393 Chenopodium quinoa HOM05D005650 ORTHO05D007020 3.4e-195 685.6 531 64.2
VMungo0251G0664 Vigna mungo HOM05D005650 ORTHO05D007020 3.2e-193 679.1 523 66.0
Lj6C735G0 Lonicera japonica HOM05D005650 ORTHO05D007020 5.4e-193 678.3 565 62.1
BcaB02g07240 Brassica carinata HOM05D005650 ORTHO05D007020 1.6e-192 676.8 535 65.0
Dinv01894 Davidia involucrata HOM05D005650 ORTHO05D007020 1.6e-192 676.8 505 67.3
VMungo1127G0110 Vigna mungo HOM05D005650 ORTHO05D007020 2.1e-192 676.4 523 65.6
CsaV3_5G014540 Cucumis sativus L. HOM05D005650 ORTHO05D007020 6.0e-192 674.9 534 64.8
BraA07t30337Z Brassica rapa HOM05D005650 ORTHO05D007020 7.8e-192 674.5 535 64.5
AL1G28180 Arabidopsis lyrata HOM05D005650 ORTHO05D007020 1.3e-191 673.7 532 63.7
Sed0001111 Sechium edule HOM05D005650 ORTHO05D007020 6.6e-191 671.4 534 63.7
AT1G16020 Arabidopsis thaliana HOM05D005650 ORTHO05D007020 1.1e-190 670.6 532 63.2
C06p29600 Brassica napus HOM05D005650 ORTHO05D007020 1.6e-189 666.8 535 63.7
BolC6t38125H Brassica oleracea HOM05D005650 ORTHO05D007020 2.1e-189 666.4 539 63.8
BcaC08g45346 Brassica carinata HOM05D005650 ORTHO05D007020 4.7e-189 665.2 535 63.6
Sp1g14330 Schrenkiella parvula HOM05D005650 ORTHO05D007020 5.2e-188 661.8 533 63.2
Sp5g34830 Schrenkiella parvula HOM05D005650 ORTHO05D007020 4.4e-187 658.7 535 63.7
C08p44650 Brassica napus HOM05D005650 ORTHO05D007020 1.3e-186 657.1 533 62.9
Carub.0002s2663 Capsella rubella HOM05D005650 ORTHO05D007020 1.7e-186 656.8 539 62.5
Aa31LG7G600 Aethionema arabicum HOM05D005650 ORTHO05D007020 2.9e-186 656.0 532 62.8
AT1G80910 Arabidopsis thaliana HOM05D005650 ORTHO05D007020 3.8e-186 655.6 535 63.9
Lalb_Chr14g0362121 Lupinus albus HOM05D005650 ORTHO05D007020 4.9e-186 655.2 533 61.0
A07p26920 Brassica napus HOM05D005650 ORTHO05D007020 1.9e-185 653.3 525 63.8
Thhalv10018445m.g Eutrema salsugineum HOM05D005650 ORTHO05D007020 7.1e-185 651.4 535 63.2
Cpa.g.sc362.1 Carica papaya HOM05D005650 ORTHO05D007020 9.2e-185 651.0 487 68.0
BolC8t52011H Brassica oleracea HOM05D005650 ORTHO05D007020 1.6e-184 650.2 533 62.5
Ah.01g015510 Amaranthus hybridus HOM05D005650 ORTHO05D007020 7.8e-184 647.9 533 63.0
FAN17G2396 Fragaria x ananassa HOM05D005650 ORTHO05D007020 2.3e-183 646.4 522 63.8
CARHR073550 Cardamine hirsuta HOM05D005650 ORTHO05D007020 6.6e-183 644.8 535 62.4
THA.LOC104814015 Tarenaya hassleriana HOM05D005650 ORTHO05D007020 8.6e-183 644.4 556 61.2
BraA09t41479Z Brassica rapa HOM05D005650 ORTHO05D007020 1.1e-182 644.0 534 62.0
FAN07G2273 Fragaria x ananassa HOM05D005650 ORTHO05D007020 1.1e-182 644.0 525 63.4
Aa31LG4G1220 Aethionema arabicum HOM05D005650 ORTHO05D007020 1.5e-182 643.7 536 62.7
Thhalv10007433m.g Eutrema salsugineum HOM05D005650 ORTHO05D007020 2.5e-182 642.9 532 61.7
A09p61060 Brassica napus HOM05D005650 ORTHO05D007020 9.6e-182 641.0 534 61.8
AL2G40470 Arabidopsis lyrata HOM05D005650 ORTHO05D007020 1.6e-181 640.2 537 61.8
Peaxi162Scf00439g00528 Petunia axillaris HOM05D005650 ORTHO05D007020 1.1e-180 637.5 531 63.7
ATR0021G018 Amborella trichopoda HOM05D005650 ORTHO05D007020 5.8e-179 631.7 528 61.9
CARHR016520 Cardamine hirsuta HOM05D005650 ORTHO05D007020 3.8e-178 629.0 532 59.8
Carub.0001s1582 Capsella rubella HOM05D005650 ORTHO05D007020 1.2e-176 624.0 534 59.6
TPR.G19250 Trifolium pratense HOM05D005650 ORTHO05D007020 6.2e-173 611.7 533 61.0
PGR004G1106 Punica granatum HOM05D005650 ORTHO05D007020 1.2e-171 607.4 448 67.9
Os08g0427300 Oryza sativa ssp. japonica HOM05D005650 ORTHO05D007020 3.8e-170 602.4 533 58.9
CiPaw.05G158000 Carya illinoinensis HOM05D005650 ORTHO05D007020 1.4e-169 600.5 450 66.7
SEGI_01999 Sequoiadendron giganteum HOM05D005650 ORTHO05D007020 6.7e-167 591.7 536 56.5
Zm00001eb179310 Zea mays HOM05D005650 ORTHO05D007020 6.7e-167 591.7 533 58.3
BcaB03g14509 Brassica carinata HOM05D005650 ORTHO05D007020 2.1e-165 586.6 533 57.6
MELO3C026414.2 Cucumis melo HOM05D005650 ORTHO05D007020 3.7e-157 559.3 448 64.1
CDE05G1068 Ceratophyllum demersum HOM05D005650 ORTHO05D007020 7.6e-155 551.6 468 62.6
SHI04292 Sapria himalayana HOM05D005650 ORTHO05D007020 1.6e-149 533.9 517 55.3
COL.COLO4_27613 Corchorus olitorius HOM05D005650 ORTHO05D007020 3.1e-140 503.1 350 70.9
Sed0000862 Sechium edule HOM05D005650 ORTHO05D007020 2.2e-125 453.8 470 53.0
Pp3c16_7940 Physcomitrium patens HOM05D005650 ORTHO05D007020 2.0e-123 447.2 531 46.9
HPP92_009689 Vanilla planifolia HOM05D005650 ORTHO05D007020 2.2e-122 443.7 414 57.0
EL10Ac9g20842 Beta vulgaris HOM05D005650 ORTHO05D007020 5.0e-122 442.6 387 57.9
Mapoly0059s0063 Marchantia polymorpha HOM05D005650 ORTHO05D007020 1.6e-120 437.6 549 43.9
Oeu059514.1 Olea europaea HOM05D005650 ORTHO05D007020 7.5e-118 428.7 479 53.9
SMO146G0258 Selaginella moellendorffii HOM05D005650 ORTHO05D007020 4.1e-116 422.9 520 44.6
AagrBONN_evm.TU.Sc2ySwM_117.2271 Anthoceros agrestis HOM05D005650 ORTHO05D007020 4.3e-97 359.8 491 41.8
Dinv00920 Davidia involucrata HOM05D005650 ORTHO05D007020 6.4e-61 239.6 139 82.0
DCAR_023531 Daucus carota HOM05D005650 ORTHO05D007020 9.9e-54 215.7 445 36.9
Oeu036123.1 Olea europaea HOM05D005650 ORTHO05D007020 8.1e-48 196.1 134 71.6
C06p32880 Brassica napus HOM05D005650 ORTHO05D007020 3.5e-35 154.1 157 54.8
C05p23900 Brassica napus HOM05D005650 ORTHO05D007020 9.7e-33 146.0 280 35.4
CiPaw.05G157900 Carya illinoinensis HOM05D005650 ORTHO05D007020 8.5e-29 132.9 79 77.2
CBR_g31091 Chara braunii HOM05D000019 ORTHO05D000048 2.4e-23 114.8 143 39.2
Lsat_1_v5_gn_2_121941 Lactuca sativa HOM05D005650 ORTHO05D007020 3.1e-23 114.4 77 64.9
Lsat_1_v5_gn_7_69840 Lactuca sativa HOM05D005650 ORTHO05D007020 2.6e-22 111.3 73 69.9
MELO3C019077.2 Cucumis melo HOM05D005650 ORTHO05D007020 1.1e-20 105.9 72 69.4
C06p32890 Brassica napus HOM05D005650 ORTHO05D007020 2.5e-20 104.8 170 38.8
Lsat_1_v5_gn_1_123601 Lactuca sativa HOM05D005650 ORTHO05D007020 9.4e-20 102.8 95 55.8
Cre07.g327000 Chlamydomonas reinhardtii HOM05D005650 ORTHO05D007020 1.7e-16 92.0 251 29.5
CBR_g31097 Chara braunii HOM05D000019 ORTHO05D000048 6.1e-11 73.6 53 58.5
BolC6t38409H Brassica oleracea HOM05D005650 ORTHO05D007020 1.1e-07 62.8 113 42.5
C06p53600 Brassica napus HOM05D005650 ORTHO05D040396 5.3e-07 60.5 40 72.5
MCO11G935 Micromonas commoda HOM05D005650 ORTHO05D007020 5.9e-06 57.0 137 29.9


User provided reference genes

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