Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H04987 Eucalyptus grandis HOM05D005203 ORTHO05D006383 7.9e-79 297.0 143 100.0
Eucgr.L00584 Eucalyptus grandis HOM05D005203 ORTHO05D006383 1.2e-66 256.5 130 94.6
Eucgr.H04989 Eucalyptus grandis HOM05D005203 ORTHO05D006383 3.8e-65 251.5 130 92.3
CSS0012413 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 2.7e-55 218.8 129 78.3
Cc09_g10810 Coffea canephora HOM05D005203 ORTHO05D006383 2.3e-54 215.7 126 77.0
Dinv14173 Davidia involucrata HOM05D005203 ORTHO05D006383 3.0e-54 215.3 126 77.8
Dinv41871 Davidia involucrata HOM05D005203 ORTHO05D006383 1.5e-53 213.0 126 75.4
Thecc.02G146000 Theobroma cacao HOM05D005203 ORTHO05D006383 4.4e-53 211.5 130 75.4
Potri.009G168000 Populus trichocarpa HOM05D005203 ORTHO05D006383 5.7e-53 211.1 129 74.4
Oeu006117.1 Olea europaea HOM05D005203 ORTHO05D006383 3.7e-52 208.4 133 71.4
PGR042G0992 Punica granatum HOM05D005203 ORTHO05D006383 6.3e-52 207.6 127 78.0
Sabra09G0130500 Salix brachista HOM05D005203 ORTHO05D006383 1.1e-51 206.8 129 72.1
TAR628G1330 Trochodendron aralioides HOM05D005203 ORTHO05D006383 1.1e-51 206.8 127 72.4
Cfa005368 Carpinus fangiana HOM05D005203 ORTHO05D006383 2.4e-51 205.7 130 74.6
MD10G1141600 Malus domestica HOM05D005203 ORTHO05D006383 2.4e-51 205.7 130 72.3
PSO210G4213 Papaver somniferum HOM05D005203 ORTHO05D006383 4.1e-51 204.9 130 72.3
Prupe.8G179800 Prunus persica HOM05D005203 ORTHO05D006383 7.0e-51 204.1 130 73.1
RcHm_v2.0_Chr6g0280891 Rosa chinensis HOM05D005203 ORTHO05D006383 7.0e-51 204.1 126 73.0
Aqoxy5G00999 Aquilegia oxysepala HOM05D005203 ORTHO05D006383 9.1e-51 203.8 127 70.1
PSO170G2598 Papaver somniferum HOM05D005203 ORTHO05D006383 1.2e-50 203.4 130 72.3
Solyc01g112240.4 Solanum lycopersicum HOM05D005203 ORTHO05D006383 1.2e-50 203.4 127 71.7
Cfa005369 Carpinus fangiana HOM05D005203 ORTHO05D006383 1.6e-50 203.0 130 73.8
MELO3C013249.2 Cucumis melo HOM05D005203 ORTHO05D006383 1.6e-50 203.0 126 71.4
AUR62013174 Chenopodium quinoa HOM05D005203 ORTHO05D006383 2.0e-50 202.6 134 69.4
Nn6g31681 Nelumbo nucifera HOM05D005203 ORTHO05D006383 2.7e-50 202.2 127 72.4
HanXRQChr15g0476431 Helianthus annuus HOM05D005203 ORTHO05D006383 3.5e-50 201.8 130 70.8
GSVIVG01002028001 Vitis vinifera HOM05D005203 ORTHO05D006383 4.5e-50 201.4 126 72.2
Sabra04G0139200 Salix brachista HOM05D005203 ORTHO05D006383 5.9e-50 201.1 130 69.2
Glyma.04G000400 Glycine max HOM05D005203 ORTHO05D006383 7.7e-50 200.7 127 71.7
Peaxi162Scf00362g00132 Petunia axillaris HOM05D005203 ORTHO05D006383 7.7e-50 200.7 132 72.7
AUR62010173 Chenopodium quinoa HOM05D005203 ORTHO05D006383 1.3e-49 199.9 131 70.2
Potri.004G206900 Populus trichocarpa HOM05D005203 ORTHO05D006383 1.3e-49 199.9 130 68.5
Sc18g0005820 Simmondsia chinensis HOM05D005203 ORTHO05D006383 1.3e-49 199.9 130 70.0
CANSAT25G3783 Cannabis sativa HOM05D005203 ORTHO05D006383 1.7e-49 199.5 130 70.8
QL11p056323 Quercus lobata HOM05D005203 ORTHO05D006383 1.7e-49 199.5 126 70.6
MSTRG.19946 Avicennia marina HOM05D005203 ORTHO05D006383 2.2e-49 199.1 127 68.5
CiPaw.06G115500 Carya illinoinensis HOM05D005203 ORTHO05D006383 2.2e-49 199.1 130 70.0
Gohir.D12G014000 Gossypium hirsutum HOM05D005203 ORTHO05D006383 2.2e-49 199.1 130 70.8
Gorai.008G014000 Gossypium raimondii HOM05D005203 ORTHO05D006383 2.2e-49 199.1 130 70.8
ATR0807G110 Amborella trichopoda HOM05D005203 ORTHO05D006383 2.9e-49 198.7 126 70.6
Glyma.06G000300 Glycine max HOM05D005203 ORTHO05D006383 2.9e-49 198.7 127 70.9
MD05G1138700 Malus domestica HOM05D005203 ORTHO05D006383 2.9e-49 198.7 130 71.5
ClCG02G003410 Citrullus lanatus HOM05D005203 ORTHO05D006383 3.8e-49 198.4 123 70.7
Haze_02001 Corylus avellana HOM05D005203 ORTHO05D006383 5.0e-49 198.0 130 72.3
CsaV3_7G001910 Cucumis sativus L. HOM05D005203 ORTHO05D006383 5.0e-49 198.0 126 68.3
Sed0018804 Sechium edule HOM05D005203 ORTHO05D006383 5.0e-49 198.0 126 69.8
FvH4_2g16770 Fragaria vesca HOM05D005203 ORTHO05D006383 6.5e-49 197.6 126 71.4
SGA_v2.0_scaffold399G50809 Striga asiatica HOM05D005203 ORTHO05D006383 6.5e-49 197.6 133 66.9
FAN15G3115 Fragaria x ananassa HOM05D005203 ORTHO05D006383 8.5e-49 197.2 126 70.6
Gohir.A12G013200 Gossypium hirsutum HOM05D005203 ORTHO05D006383 8.5e-49 197.2 130 69.2
Lj1g0021981 Lotus japonicus HOM05D005203 ORTHO05D006383 8.5e-49 197.2 130 70.8
Medtr3g118525 Medicago truncatula HOM05D005203 ORTHO05D006383 8.5e-49 197.2 127 70.9
Cpa.g.c28580 Carica papaya HOM05D005203 ORTHO05D006383 5.5e-48 194.5 127 69.3
Lsat_1_v5_gn_3_48560 Lactuca sativa HOM05D005203 ORTHO05D006383 5.5e-48 194.5 127 69.3
TWI75G1664 Tripterygium wilfordii HOM05D005203 ORTHO05D006383 5.5e-48 194.5 130 68.5
arahy.Tifrunner.gnm1.ann1.Z16TJ0 Arachis hypogaea HOM05D005203 ORTHO05D006383 7.2e-48 194.1 133 69.2
Lalb_Chr08g0246871 Lupinus albus HOM05D005203 ORTHO05D006383 7.2e-48 194.1 127 71.7
VMungo1309G1049 Vigna mungo HOM05D005203 ORTHO05D006383 7.2e-48 194.1 128 67.2
Manes.11G110000 Manihot esculenta HOM05D005203 ORTHO05D006383 9.4e-48 193.7 130 70.0
TPR.G38553 Trifolium pratense HOM05D005203 ORTHO05D006383 1.2e-47 193.4 127 70.9
AL7G10160 Arabidopsis lyrata HOM05D005203 ORTHO05D006383 2.7e-47 192.2 130 67.7
Ciclev10028418m.g Citrus clementina HOM05D005203 ORTHO05D006383 2.7e-47 192.2 127 68.5
Phvul.009G115600 Phaseolus vulgaris HOM05D005203 ORTHO05D006383 3.6e-47 191.8 127 68.5
arahy.Tifrunner.gnm1.ann1.H6WGQ1 Arachis hypogaea HOM05D005203 ORTHO05D006383 4.7e-47 191.4 129 69.8
CSS0021914 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 6.1e-47 191.0 126 69.0
FAN24G3349 Fragaria x ananassa HOM05D005203 ORTHO05D006383 1.0e-46 190.3 124 70.2
FAN27G1508 Fragaria x ananassa HOM05D005203 ORTHO05D006383 1.0e-46 190.3 124 70.2
CSS0022527 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 1.4e-46 189.9 126 69.0
Ca_15273_v3 Cicer arietinum L. HOM05D005203 ORTHO05D006383 1.4e-46 189.9 127 67.7
ECA246G3822 Erigeron canadensis HOM05D005203 ORTHO05D006383 1.4e-46 189.9 130 67.7
Lsat_1_v5_gn_4_71380 Lactuca sativa HOM05D005203 ORTHO05D006383 1.4e-46 189.9 127 66.1
CDE07G2075 Ceratophyllum demersum HOM05D005203 ORTHO05D006383 2.3e-46 189.1 123 67.5
Migut.B00006 Erythranthe guttata HOM05D005203 ORTHO05D006383 2.3e-46 189.1 126 65.1
Atru.chr5.3533 Acer truncatum HOM05D005203 ORTHO05D006383 3.0e-46 188.7 126 66.7
Psat5g000480 Pisum sativum HOM05D005203 ORTHO05D006383 3.0e-46 188.7 127 69.3
AT4G38240 Arabidopsis thaliana HOM05D005203 ORTHO05D006383 8.8e-46 187.2 130 66.2
BcaNung01996 Brassica carinata HOM05D005203 ORTHO05D006383 1.2e-45 186.8 133 62.4
CARHR294030 Cardamine hirsuta HOM05D005203 ORTHO05D006383 2.0e-45 186.0 130 64.6
ECA234G1180 Erigeron canadensis HOM05D005203 ORTHO05D006383 2.6e-45 185.7 126 65.1
THA.LOC104824732 Tarenaya hassleriana HOM05D005203 ORTHO05D006383 4.4e-45 184.9 131 66.4
Carub.0007s0018 Capsella rubella HOM05D005203 ORTHO05D006383 5.7e-45 184.5 127 64.6
Ah.01g009970 Amaranthus hybridus HOM05D005203 ORTHO05D006383 7.5e-45 184.1 128 64.8
Lj5A171G135 Lonicera japonica HOM05D005203 ORTHO05D006383 7.5e-45 184.1 133 66.2
CiPaw.05G093000 Carya illinoinensis HOM05D005203 ORTHO05D006383 9.8e-45 183.7 155 56.8
BolC7t46794H Brassica oleracea HOM05D005203 ORTHO05D006383 1.3e-44 183.3 127 63.8
Thhalv10025208m.g Eutrema salsugineum HOM05D005203 ORTHO05D006383 1.3e-44 183.3 127 65.4
Sp7g37480 Schrenkiella parvula HOM05D005203 ORTHO05D006383 2.2e-44 182.6 127 64.6
HanXRQChr10g0298431 Helianthus annuus HOM05D005203 ORTHO05D006383 2.8e-44 182.2 128 63.3
MBI05_g33297_MAGBIO Magnolia biondii HOM05D005203 ORTHO05D006383 3.1e-43 178.7 127 67.7
BNapus_Darmor_BZH_scaffold_146p00070 Brassica napus HOM05D005203 ORTHO05D006383 5.4e-43 177.9 120 65.0
HPP92_004948 Vanilla planifolia HOM05D005203 ORTHO05D006383 5.4e-43 177.9 130 63.1
SalBow1G5214 Salvia bowleyana HOM05D005203 ORTHO05D006383 1.6e-42 176.4 109 72.5
Os02g0832800 Oryza sativa ssp. japonica HOM05D005203 ORTHO05D006383 3.8e-41 171.8 127 61.4
Aa31LG1G14200 Aethionema arabicum HOM05D005203 ORTHO05D006383 8.6e-41 170.6 129 58.9
BraA06t27778Z Brassica rapa HOM05D005203 ORTHO05D006383 1.5e-40 169.9 115 65.2
Zm00001eb421090 Zea mays HOM05D005203 ORTHO05D006383 2.5e-40 169.1 127 63.0
vmacro02339 Vaccinium macrocarpon HOM05D005203 ORTHO05D006383 3.3e-40 168.7 108 70.4
SMO201G0157 Selaginella moellendorffii HOM05D005203 ORTHO05D006383 9.5e-40 167.2 126 61.9
Actinidia20576 Actinidia chinensis HOM05D005203 ORTHO05D006383 8.0e-39 164.1 100 75.0
Nitab4.5_0000783g0090 Nicotiana tabacum HOM05D005203 ORTHO05D006383 8.0e-39 164.1 152 55.9
HPP92_022155 Vanilla planifolia HOM05D005203 ORTHO05D006383 6.8e-38 161.0 127 56.7
EL10Ac9g21529 Beta vulgaris HOM05D005203 ORTHO05D006383 2.0e-37 159.5 127 60.6
TAR376G0977 Trochodendron aralioides HOM05D005203 ORTHO05D006383 1.6e-34 149.8 120 60.8
AagrBONN_evm.TU.Sc2ySwM_362.2915 Anthoceros agrestis HOM05D005203 ORTHO05D006383 3.5e-34 148.7 116 61.2
Mapoly0041s0049 Marchantia polymorpha HOM05D005203 ORTHO05D006383 5.9e-34 147.9 120 57.5
DCAR_026076 Daucus carota HOM05D005203 ORTHO05D006383 2.5e-32 142.5 92 66.3
Sc18g0005790 Simmondsia chinensis HOM05D005203 ORTHO05D006383 5.6e-32 141.4 96 65.6
COL.COLO4_19776 Corchorus olitorius HOM05D005203 ORTHO05D006383 9.5e-32 140.6 87 74.7
Aa31LG6G16700 Aethionema arabicum HOM05D005203 ORTHO05D006383 4.0e-30 135.2 92 63.0
Pp3c22_17330 Physcomitrium patens HOM05D005203 ORTHO05D006383 3.7e-28 128.6 128 53.9
CBR_g40811 Chara braunii HOM05D005203 ORTHO05D006383 1.4e-27 126.7 121 47.1
PGSC0003DMG403014680 Solanum tuberosum HOM05D005203 ORTHO05D006383 2.4e-27 125.9 97 60.8
Pp3c12_4490 Physcomitrium patens HOM05D005203 ORTHO05D006383 7.8e-26 120.9 115 47.8
Sed0000358 Sechium edule HOM05D005203 ORTHO05D006383 1.5e-24 116.7 108 51.9
Nitab4.5_0010601g0030 Nicotiana tabacum HOM05D005203 ORTHO05D006383 3.1e-22 109.0 127 48.0
Hund06364 Selenicereus undatus HOM05D005203 ORTHO05D006383 3.7e-20 102.1 91 53.8
MCO10G329 Micromonas commoda HOM05D005203 ORTHO05D006383 3.6e-15 85.5 126 38.9


User provided reference genes

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