Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C02697 Eucalyptus grandis HOM05D000005 ORTHO05D007072 5.2e-144 515.0 406 100.0
Eucgr.B02960 Eucalyptus grandis HOM05D000005 ORTHO05D191893 3.6e-68 263.1 401 72.1
Eucgr.B00005 Eucalyptus grandis HOM05D000005 ORTHO05D007072 8.3e-57 225.3 389 52.7
Eucgr.B00001 Eucalyptus grandis HOM05D019435 ORTHO05D007072 3.2e-48 196.8 403 65.3
Eucgr.C02684 Eucalyptus grandis HOM05D000005 ORTHO05D007072 3.6e-44 183.3 258 57.8
Eucgr.B00007 Eucalyptus grandis HOM05D000005 ORTHO05D007072 8.1e-44 182.2 403 63.0
Eucgr.L03423 Eucalyptus grandis HOM05D000005 ORTHO05D007072 2.9e-41 173.7 389 64.3
Eucgr.C02708 Eucalyptus grandis HOM05D019435 ORTHO05D007072 1.2e-36 158.3 402 54.2
Eucgr.K02295 Eucalyptus grandis HOM05D019435 ORTHO05D007072 1.7e-22 111.3 193 37.8
Eucgr.H02369 Eucalyptus grandis HOM05D000005 ORTHO05D195406 5.1e-22 109.8 403 55.8
Eucgr.H02376 Eucalyptus grandis HOM05D000005 ORTHO05D191789 8.4e-17 92.4 182 36.8
Eucgr.J01295 Eucalyptus grandis HOM05D000005 ORTHO05D000012 3.0e-14 84.0 396 26.3
Eucgr.B02964 Eucalyptus grandis HOM05D000005 ORTHO05D007072 5.6e-13 79.7 59 67.8
Eucgr.B00003 Eucalyptus grandis HOM05D000005 ORTHO05D194664 1.3e-12 78.6 55 70.9
Eucgr.C02709 Eucalyptus grandis HOM05D000005 ORTHO05D007072 1.3e-12 78.6 57 68.4
Eucgr.C02704 Eucalyptus grandis HOM05D000005 ORTHO05D194411 1.6e-12 78.2 57 68.4
Eucgr.L03564 Eucalyptus grandis HOM05D019435 ORTHO05D007072 6.2e-12 76.3 150 38.0
Eucgr.J01303 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.1e-11 75.5 443 25.1
Eucgr.J01320 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.1e-11 75.5 422 24.2
Eucgr.H02362 Eucalyptus grandis HOM05D000005 ORTHO05D194979 2.4e-11 74.3 57 66.7
PGR044G2023 Punica granatum HOM05D000005 ORTHO05D336776 4.0e-11 73.6 218 34.4
PGR044G0279 Punica granatum HOM05D000005 ORTHO05D000012 6.9e-11 72.8 59 62.7
PGR044G1419 Punica granatum HOM05D000005 ORTHO05D000012 6.9e-11 72.8 59 62.7
PGR044G0625 Punica granatum HOM05D000005 ORTHO05D000012 9.0e-11 72.4 287 58.2
Eucgr.J01324 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.5e-10 71.6 406 25.4
PGR044G0500 Punica granatum HOM05D000005 ORTHO05D011459 1.5e-10 71.6 56 66.1
Eucgr.J01308 Eucalyptus grandis HOM05D000005 ORTHO05D000012 2.6e-10 70.9 413 26.2
Eucgr.C02072 Eucalyptus grandis HOM05D012617 ORTHO05D007072 4.5e-10 70.1 215 30.2
PGR142G3211 Punica granatum HOM05D000005 ORTHO05D000012 4.5e-10 70.1 237 32.1
PGR044G1836 Punica granatum HOM05D000005 ORTHO05D336904 5.8e-10 69.7 242 31.4
PGR044G2177 Punica granatum HOM05D000005 ORTHO05D011898 1.7e-09 68.2 56 62.5
Eucgr.J01330 Eucalyptus grandis HOM05D000005 ORTHO05D007072 2.2e-09 67.8 58 60.3
PGR142G2220 Punica granatum HOM05D000005 ORTHO05D000012 2.9e-09 67.4 237 32.1
Eucgr.C02041 Eucalyptus grandis HOM05D000005 ORTHO05D007072 6.5e-09 66.2 405 31.9
Eucgr.J01296 Eucalyptus grandis HOM05D000005 ORTHO05D000012 8.4e-09 65.9 408 29.7
PGR042G1761 Punica granatum HOM05D000005 ORTHO05D000012 1.4e-08 65.1 54 61.1
PGR044G2498 Punica granatum HOM05D000005 ORTHO05D011459 1.4e-08 65.1 57 57.9
Eucgr.C02618 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.9e-08 64.7 206 34.5
Eucgr.H02381 Eucalyptus grandis HOM05D000005 ORTHO05D192157 1.9e-08 64.7 57 59.6
PGR142G2505 Punica granatum HOM05D000005 ORTHO05D000012 2.5e-08 64.3 58 56.9
Eucgr.C02628 Eucalyptus grandis HOM05D000005 ORTHO05D007072 3.2e-08 63.9 56 57.1
Eucgr.E03335 Eucalyptus grandis HOM05D000005 ORTHO05D195067 3.2e-08 63.9 55 61.8
Eucgr.L00490 Eucalyptus grandis HOM05D000005 ORTHO05D007073 3.2e-08 63.9 59 52.5
Eucgr.B01756 Eucalyptus grandis HOM05D000005 ORTHO05D000012 4.2e-08 63.5 58 51.7
Eucgr.C02633 Eucalyptus grandis HOM05D000005 ORTHO05D007072 4.2e-08 63.5 56 55.4
Eucgr.C02081 Eucalyptus grandis HOM05D000005 ORTHO05D035198 7.1e-08 62.8 50 60.0
PGR044G2537 Punica granatum HOM05D000005 ORTHO05D000012 7.1e-08 62.8 59 54.2
Eucgr.B01065 Eucalyptus grandis HOM05D000005 ORTHO05D007072 9.3e-08 62.4 56 53.6
Eucgr.C02638 Eucalyptus grandis HOM05D000005 ORTHO05D011459 9.3e-08 62.4 206 34.5
Eucgr.C02641 Eucalyptus grandis HOM05D000005 ORTHO05D007072 9.3e-08 62.4 57 56.1
Eucgr.C02655 Eucalyptus grandis HOM05D000005 ORTHO05D007072 9.3e-08 62.4 56 51.8
PGR044G1420 Punica granatum HOM05D000005 ORTHO05D011459 9.3e-08 62.4 59 54.2
Eucgr.E03133 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.2e-07 62.0 97 42.3
Eucgr.F03887 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.2e-07 62.0 233 30.9
PGR142G0403 Punica granatum HOM05D000005 ORTHO05D000012 1.2e-07 62.0 56 55.4
PGR142G0894 Punica granatum HOM05D000005 ORTHO05D000012 1.2e-07 62.0 58 55.2
Eucgr.C02865 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.6e-07 61.6 55 54.5
Eucgr.E03126 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.6e-07 61.6 56 57.1
PGR044G0375 Punica granatum HOM05D000005 ORTHO05D000012 1.6e-07 61.6 59 54.2
PGR044G1867 Punica granatum HOM05D000005 ORTHO05D000012 1.6e-07 61.6 59 54.2
Eucgr.B01327 Eucalyptus grandis HOM05D012617 ORTHO05D010769 2.1e-07 61.2 76 47.4
Eucgr.C02044 Eucalyptus grandis HOM05D000005 ORTHO05D007072 2.1e-07 61.2 408 34.3
PGR004G0619 Punica granatum HOM05D017779 ORTHO05D007072 2.1e-07 61.2 220 32.3
PGR042G3882 Punica granatum HOM05D000005 ORTHO05D000012 2.1e-07 61.2 57 56.1
PGR065G0009 Punica granatum HOM05D017779 ORTHO05D007072 2.1e-07 61.2 220 32.3
PGR142G4263 Punica granatum HOM05D000005 ORTHO05D000012 2.1e-07 61.2 446 29.8
Eucgr.C02630 Eucalyptus grandis HOM05D000005 ORTHO05D007072 2.7e-07 60.8 56 53.6
Eucgr.E02803 Eucalyptus grandis HOM05D000005 ORTHO05D007073 2.7e-07 60.8 56 53.6
Eucgr.E03135 Eucalyptus grandis HOM05D000005 ORTHO05D000012 2.7e-07 60.8 55 56.4
Eucgr.E03330 Eucalyptus grandis HOM05D000005 ORTHO05D007072 2.7e-07 60.8 56 55.4
Eucgr.F04310 Eucalyptus grandis HOM05D000005 ORTHO05D007072 2.7e-07 60.8 56 53.6
Eucgr.J01301 Eucalyptus grandis HOM05D000005 ORTHO05D007073 2.7e-07 60.8 58 53.4
Eucgr.J01336 Eucalyptus grandis HOM05D000005 ORTHO05D011459 2.7e-07 60.8 58 55.2
PGR044G1251 Punica granatum HOM05D000005 ORTHO05D000012 2.7e-07 60.8 59 52.5
PGR142G1610 Punica granatum HOM05D000005 ORTHO05D000012 2.7e-07 60.8 56 55.4
Eucgr.F04314 Eucalyptus grandis HOM05D000005 ORTHO05D007072 3.5e-07 60.5 56 53.6
MD17G1276000 Malus domestica HOM05D000005 ORTHO05D000012 3.5e-07 60.5 178 34.8
PGR004G2168 Punica granatum HOM05D000005 ORTHO05D000012 3.5e-07 60.5 53 58.5
PGR044G1253 Punica granatum HOM05D000005 ORTHO05D000012 3.5e-07 60.5 59 54.2
Eucgr.C02087 Eucalyptus grandis HOM05D000005 ORTHO05D007072 4.6e-07 60.1 50 54.0
Eucgr.L01406 Eucalyptus grandis HOM05D000005 ORTHO05D000012 4.6e-07 60.1 58 51.7
PGR044G1147 Punica granatum HOM05D000005 ORTHO05D000012 4.6e-07 60.1 59 52.5
PGR142G4010 Punica granatum HOM05D000005 ORTHO05D000012 4.6e-07 60.1 58 53.4
Eucgr.L01409 Eucalyptus grandis HOM05D000005 ORTHO05D000012 6.0e-07 59.7 47 59.6
MD02G1052200 Malus domestica HOM05D000005 ORTHO05D000012 6.0e-07 59.7 57 49.1
PGR142G1752 Punica granatum HOM05D000005 ORTHO05D000012 6.0e-07 59.7 259 30.1
Eucgr.F04313 Eucalyptus grandis HOM05D000005 ORTHO05D007072 7.9e-07 59.3 56 53.6
Eucgr.C02110 Eucalyptus grandis HOM05D000005 ORTHO05D007073 1.0e-06 58.9 55 54.5
Eucgr.C02112 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.0e-06 58.9 55 52.7
Eucgr.D00729 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.0e-06 58.9 55 56.4
PGR044G0200 Punica granatum HOM05D000005 ORTHO05D011459 1.0e-06 58.9 59 54.2
Eucgr.C04267 Eucalyptus grandis HOM05D000005 ORTHO05D007072 1.3e-06 58.5 55 50.9
Eucgr.E03194 Eucalyptus grandis HOM05D000009 ORTHO05D007072 1.3e-06 58.5 56 51.8
Eucgr.H03694 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.3e-06 58.5 55 52.7
PGR044G1140 Punica granatum HOM05D000005 ORTHO05D000239 1.3e-06 58.5 52 57.7
PGR044G1988 Punica granatum HOM05D000005 ORTHO05D011459 1.3e-06 58.5 51 54.9
PGR142G0579 Punica granatum HOM05D000005 ORTHO05D000012 1.3e-06 58.5 189 30.7
PGR142G3641 Punica granatum HOM05D000005 ORTHO05D000012 1.3e-06 58.5 55 54.5
Eucgr.D00728 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.8e-06 58.2 57 54.4
Eucgr.E03184 Eucalyptus grandis HOM05D000009 ORTHO05D007072 1.8e-06 58.2 56 50.0
PGR042G1273 Punica granatum HOM05D000005 ORTHO05D000012 1.8e-06 58.2 51 56.9
MD10G1021000 Malus domestica HOM05D000005 ORTHO05D000012 2.3e-06 57.8 56 48.2
MD12G1024400 Malus domestica HOM05D000005 ORTHO05D001748 2.3e-06 57.8 175 34.3
Nn8g40911 Nelumbo nucifera HOM05D000005 ORTHO05D000012 2.3e-06 57.8 58 50.0
PGR142G2663 Punica granatum HOM05D000005 ORTHO05D000012 2.3e-06 57.8 59 52.5
PGR142G2685 Punica granatum HOM05D000005 ORTHO05D000012 2.3e-06 57.8 56 53.6
Eucgr.G00358 Eucalyptus grandis HOM05D000005 ORTHO05D007072 3.0e-06 57.4 56 53.6
PGR042G2042 Punica granatum HOM05D003506 ORTHO05D004063 3.0e-06 57.4 187 34.2
PGR142G1159 Punica granatum HOM05D000005 ORTHO05D017912 3.0e-06 57.4 57 54.4
PGR142G3011 Punica granatum HOM05D000005 ORTHO05D000012 3.0e-06 57.4 55 54.5
Eucgr.E01810 Eucalyptus grandis HOM05D000005 ORTHO05D000012 3.9e-06 57.0 199 30.7
Eucgr.L01460 Eucalyptus grandis HOM05D000005 ORTHO05D007072 3.9e-06 57.0 55 50.9
PGR031G3491 Punica granatum HOM05D000005 ORTHO05D000012 3.9e-06 57.0 55 50.9
PGR142G2106 Punica granatum HOM05D059705 ORTHO05D007072 3.9e-06 57.0 57 54.4
PGR142G2275 Punica granatum HOM05D000005 ORTHO05D000012 3.9e-06 57.0 164 32.9
PGR142G2421 Punica granatum HOM05D000005 ORTHO05D000012 3.9e-06 57.0 59 52.5
PGR142G2950 Punica granatum HOM05D000005 ORTHO05D000012 3.9e-06 57.0 57 54.4
PGR142G4245 Punica granatum HOM05D000005 ORTHO05D000012 3.9e-06 57.0 57 54.4
Eucgr.C03957 Eucalyptus grandis HOM05D000005 ORTHO05D193097 5.1e-06 56.6 204 29.9
Eucgr.E02522 Eucalyptus grandis HOM05D012617 ORTHO05D007073 5.1e-06 56.6 57 45.6
Eucgr.E03173 Eucalyptus grandis HOM05D000009 ORTHO05D007072 5.1e-06 56.6 56 48.2
Eucgr.E03177 Eucalyptus grandis HOM05D000009 ORTHO05D007072 5.1e-06 56.6 56 51.8
Eucgr.G02264 Eucalyptus grandis HOM05D000005 ORTHO05D007073 5.1e-06 56.6 54 50.0
PGR044G1265 Punica granatum HOM05D000005 ORTHO05D011898 5.1e-06 56.6 59 50.8
PGR044G1519 Punica granatum HOM05D000005 ORTHO05D011459 5.1e-06 56.6 54 51.9
PGR142G4113 Punica granatum HOM05D000005 ORTHO05D000012 5.1e-06 56.6 57 52.6
Eucgr.D00735 Eucalyptus grandis HOM05D000005 ORTHO05D000012 6.7e-06 56.2 56 53.6
Eucgr.E02513 Eucalyptus grandis HOM05D012617 ORTHO05D007072 6.7e-06 56.2 271 28.4
Eucgr.E03529 Eucalyptus grandis HOM05D010218 ORTHO05D007072 6.7e-06 56.2 57 50.9
Eucgr.H03785 Eucalyptus grandis HOM05D000005 ORTHO05D000012 6.7e-06 56.2 57 54.4
Gohir.D11G312600 Gossypium hirsutum HOM05D000005 ORTHO05D000012 6.7e-06 56.2 55 47.3
PGR102G0476 Punica granatum HOM05D000005 ORTHO05D000012 6.7e-06 56.2 55 47.3
PGR102G1004 Punica granatum HOM05D000005 ORTHO05D000012 6.7e-06 56.2 55 47.3
PGR102G3323 Punica granatum HOM05D000005 ORTHO05D000012 6.7e-06 56.2 58 48.3
PGR142G1897 Punica granatum HOM05D000005 ORTHO05D000012 6.7e-06 56.2 55 52.7
PGR004G1357 Punica granatum HOM05D018689 ORTHO05D007072 8.7e-06 55.8 49 61.2
PGR142G0858 Punica granatum HOM05D000005 ORTHO05D000012 8.7e-06 55.8 56 55.4


User provided reference genes

Program Settings