OrthologsController Object
(
    [name] => Orthologs
    [helpers] => Array
        (
            [Session] => 
            [Html] => 
            [Form] => 
            [Cache] => 
        )

    [uses] => Array
        (
            [0] => Annotation
            [1] => AnnotSource
            [2] => Configuration
            [3] => DnaMotifsCns
            [4] => GfDatum
            [5] => Msa
            [6] => Orthologs
            [7] => Similarities
            [8] => Trees
            [9] => AdExperiments
            [10] => FunctionalClustersExperiments
        )

    [components] => Array
        (
            [Session] => 
            [DataUtils] => 
            [FunctionalAnnotationUtils] => 
            [GeneFamilies] => 
            [Organism] => 
            [Blast] => 
            [WorkbenchUtils] => 
            [Orthology] => 
        )

    [request] => CakeRequest Object
        (
            [params] => Array
                (
                    [plugin] => 
                    [controller] => orthologs
                    [action] => explore
                    [named] => Array
                        (
                        )

                    [pass] => Array
                        (
                            [0] => SGA_v2.0_scaffold74G24624
                            [1] => spa
                        )

                )

            [data] => Array
                (
                )

            [query] => Array
                (
                )

            [url] => orthologs/explore/SGA_v2.0_scaffold74G24624/spa
            [base] => /plaza.dev/_dev_instances/feedback
            [webroot] => /plaza.dev/_dev_instances/feedback/
            [here] => /plaza.dev/_dev_instances/feedback/orthologs/explore/SGA_v2.0_scaffold74G24624/spa
            [_detectors:protected] => Array
                (
                    [get] => Array
                        (
                            [env] => REQUEST_METHOD
                            [value] => GET
                        )

                    [patch] => Array
                        (
                            [env] => REQUEST_METHOD
                            [value] => PATCH
                        )

                    [post] => Array
                        (
                            [env] => REQUEST_METHOD
                            [value] => POST
                        )

                    [put] => Array
                        (
                            [env] => REQUEST_METHOD
                            [value] => PUT
                        )

                    [delete] => Array
                        (
                            [env] => REQUEST_METHOD
                            [value] => DELETE
                        )

                    [head] => Array
                        (
                            [env] => REQUEST_METHOD
                            [value] => HEAD
                        )

                    [options] => Array
                        (
                            [env] => REQUEST_METHOD
                            [value] => OPTIONS
                        )

                    [ssl] => Array
                        (
                            [env] => HTTPS
                            [value] => 1
                        )

                    [ajax] => Array
                        (
                            [env] => HTTP_X_REQUESTED_WITH
                            [value] => XMLHttpRequest
                        )

                    [flash] => Array
                        (
                            [env] => HTTP_USER_AGENT
                            [pattern] => /^(Shockwave|Adobe) Flash/
                        )

                    [mobile] => Array
                        (
                            [env] => HTTP_USER_AGENT
                            [options] => Array
                                (
                                    [0] => Android
                                    [1] => AvantGo
                                    [2] => BB10
                                    [3] => BlackBerry
                                    [4] => DoCoMo
                                    [5] => Fennec
                                    [6] => iPod
                                    [7] => iPhone
                                    [8] => iPad
                                    [9] => J2ME
                                    [10] => MIDP
                                    [11] => NetFront
                                    [12] => Nokia
                                    [13] => Opera Mini
                                    [14] => Opera Mobi
                                    [15] => PalmOS
                                    [16] => PalmSource
                                    [17] => portalmmm
                                    [18] => Plucker
                                    [19] => ReqwirelessWeb
                                    [20] => SonyEricsson
                                    [21] => Symbian
                                    [22] => UP\.Browser
                                    [23] => webOS
                                    [24] => Windows CE
                                    [25] => Windows Phone OS
                                    [26] => Xiino
                                )

                        )

                    [requested] => Array
                        (
                            [param] => requested
                            [value] => 1
                        )

                    [json] => Array
                        (
                            [accept] => Array
                                (
                                    [0] => application/json
                                )

                            [param] => ext
                            [value] => json
                        )

                    [xml] => Array
                        (
                            [accept] => Array
                                (
                                    [0] => application/xml
                                    [1] => text/xml
                                )

                            [param] => ext
                            [value] => xml
                        )

                )

            [_input:protected] => 
        )

    [response] => CakeResponse Object
        (
            [_statusCodes:protected] => Array
                (
                    [100] => Continue
                    [101] => Switching Protocols
                    [200] => OK
                    [201] => Created
                    [202] => Accepted
                    [203] => Non-Authoritative Information
                    [204] => No Content
                    [205] => Reset Content
                    [206] => Partial Content
                    [300] => Multiple Choices
                    [301] => Moved Permanently
                    [302] => Found
                    [303] => See Other
                    [304] => Not Modified
                    [305] => Use Proxy
                    [307] => Temporary Redirect
                    [400] => Bad Request
                    [401] => Unauthorized
                    [402] => Payment Required
                    [403] => Forbidden
                    [404] => Not Found
                    [405] => Method Not Allowed
                    [406] => Not Acceptable
                    [407] => Proxy Authentication Required
                    [408] => Request Time-out
                    [409] => Conflict
                    [410] => Gone
                    [411] => Length Required
                    [412] => Precondition Failed
                    [413] => Request Entity Too Large
                    [414] => Request-URI Too Large
                    [415] => Unsupported Media Type
                    [416] => Requested range not satisfiable
                    [417] => Expectation Failed
                    [429] => Too Many Requests
                    [500] => Internal Server Error
                    [501] => Not Implemented
                    [502] => Bad Gateway
                    [503] => Service Unavailable
                    [504] => Gateway Time-out
                    [505] => Unsupported Version
                )

            [_mimeTypes:protected] => Array
                (
                    [html] => Array
                        (
                            [0] => text/html
                            [1] => */*
                        )

                    [json] => application/json
                    [xml] => Array
                        (
                            [0] => application/xml
                            [1] => text/xml
                        )

                    [rss] => application/rss+xml
                    [ai] => application/postscript
                    [bcpio] => application/x-bcpio
                    [bin] => application/octet-stream
                    [ccad] => application/clariscad
                    [cdf] => application/x-netcdf
                    [class] => application/octet-stream
                    [cpio] => application/x-cpio
                    [cpt] => application/mac-compactpro
                    [csh] => application/x-csh
                    [csv] => Array
                        (
                            [0] => text/csv
                            [1] => application/vnd.ms-excel
                        )

                    [dcr] => application/x-director
                    [dir] => application/x-director
                    [dms] => application/octet-stream
                    [doc] => application/msword
                    [docx] => application/vnd.openxmlformats-officedocument.wordprocessingml.document
                    [drw] => application/drafting
                    [dvi] => application/x-dvi
                    [dwg] => application/acad
                    [dxf] => application/dxf
                    [dxr] => application/x-director
                    [eot] => application/vnd.ms-fontobject
                    [eps] => application/postscript
                    [exe] => application/octet-stream
                    [ez] => application/andrew-inset
                    [flv] => video/x-flv
                    [gtar] => application/x-gtar
                    [gz] => application/x-gzip
                    [bz2] => application/x-bzip
                    [7z] => application/x-7z-compressed
                    [hdf] => application/x-hdf
                    [hqx] => application/mac-binhex40
                    [ico] => image/x-icon
                    [ips] => application/x-ipscript
                    [ipx] => application/x-ipix
                    [js] => application/javascript
                    [jsonapi] => application/vnd.api+json
                    [latex] => application/x-latex
                    [lha] => application/octet-stream
                    [lsp] => application/x-lisp
                    [lzh] => application/octet-stream
                    [man] => application/x-troff-man
                    [me] => application/x-troff-me
                    [mif] => application/vnd.mif
                    [ms] => application/x-troff-ms
                    [nc] => application/x-netcdf
                    [oda] => application/oda
                    [otf] => font/otf
                    [pdf] => application/pdf
                    [pgn] => application/x-chess-pgn
                    [pot] => application/vnd.ms-powerpoint
                    [pps] => application/vnd.ms-powerpoint
                    [ppt] => application/vnd.ms-powerpoint
                    [pptx] => application/vnd.openxmlformats-officedocument.presentationml.presentation
                    [ppz] => application/vnd.ms-powerpoint
                    [pre] => application/x-freelance
                    [prt] => application/pro_eng
                    [ps] => application/postscript
                    [roff] => application/x-troff
                    [scm] => application/x-lotusscreencam
                    [set] => application/set
                    [sh] => application/x-sh
                    [shar] => application/x-shar
                    [sit] => application/x-stuffit
                    [skd] => application/x-koan
                    [skm] => application/x-koan
                    [skp] => application/x-koan
                    [skt] => application/x-koan
                    [smi] => application/smil
                    [smil] => application/smil
                    [sol] => application/solids
                    [spl] => application/x-futuresplash
                    [src] => application/x-wais-source
                    [step] => application/STEP
                    [stl] => application/SLA
                    [stp] => application/STEP
                    [sv4cpio] => application/x-sv4cpio
                    [sv4crc] => application/x-sv4crc
                    [svg] => image/svg+xml
                    [svgz] => image/svg+xml
                    [swf] => application/x-shockwave-flash
                    [t] => application/x-troff
                    [tar] => application/x-tar
                    [tcl] => application/x-tcl
                    [tex] => application/x-tex
                    [texi] => application/x-texinfo
                    [texinfo] => application/x-texinfo
                    [tr] => application/x-troff
                    [tsp] => application/dsptype
                    [ttc] => font/ttf
                    [ttf] => font/ttf
                    [unv] => application/i-deas
                    [ustar] => application/x-ustar
                    [vcd] => application/x-cdlink
                    [vda] => application/vda
                    [xlc] => application/vnd.ms-excel
                    [xll] => application/vnd.ms-excel
                    [xlm] => application/vnd.ms-excel
                    [xls] => application/vnd.ms-excel
                    [xlsx] => application/vnd.openxmlformats-officedocument.spreadsheetml.sheet
                    [xlw] => application/vnd.ms-excel
                    [zip] => application/zip
                    [aif] => audio/x-aiff
                    [aifc] => audio/x-aiff
                    [aiff] => audio/x-aiff
                    [au] => audio/basic
                    [kar] => audio/midi
                    [mid] => audio/midi
                    [midi] => audio/midi
                    [mp2] => audio/mpeg
                    [mp3] => audio/mpeg
                    [mpga] => audio/mpeg
                    [ogg] => audio/ogg
                    [oga] => audio/ogg
                    [spx] => audio/ogg
                    [ra] => audio/x-realaudio
                    [ram] => audio/x-pn-realaudio
                    [rm] => audio/x-pn-realaudio
                    [rpm] => audio/x-pn-realaudio-plugin
                    [snd] => audio/basic
                    [tsi] => audio/TSP-audio
                    [wav] => audio/x-wav
                    [aac] => audio/aac
                    [asc] => text/plain
                    [c] => text/plain
                    [cc] => text/plain
                    [css] => text/css
                    [etx] => text/x-setext
                    [f] => text/plain
                    [f90] => text/plain
                    [h] => text/plain
                    [hh] => text/plain
                    [htm] => Array
                        (
                            [0] => text/html
                            [1] => */*
                        )

                    [ics] => text/calendar
                    [m] => text/plain
                    [rtf] => text/rtf
                    [rtx] => text/richtext
                    [sgm] => text/sgml
                    [sgml] => text/sgml
                    [tsv] => text/tab-separated-values
                    [tpl] => text/template
                    [txt] => text/plain
                    [text] => text/plain
                    [avi] => video/x-msvideo
                    [fli] => video/x-fli
                    [mov] => video/quicktime
                    [movie] => video/x-sgi-movie
                    [mpe] => video/mpeg
                    [mpeg] => video/mpeg
                    [mpg] => video/mpeg
                    [qt] => video/quicktime
                    [viv] => video/vnd.vivo
                    [vivo] => video/vnd.vivo
                    [ogv] => video/ogg
                    [webm] => video/webm
                    [mp4] => video/mp4
                    [m4v] => video/mp4
                    [f4v] => video/mp4
                    [f4p] => video/mp4
                    [m4a] => audio/mp4
                    [f4a] => audio/mp4
                    [f4b] => audio/mp4
                    [gif] => image/gif
                    [ief] => image/ief
                    [jpg] => image/jpeg
                    [jpeg] => image/jpeg
                    [jpe] => image/jpeg
                    [pbm] => image/x-portable-bitmap
                    [pgm] => image/x-portable-graymap
                    [png] => image/png
                    [pnm] => image/x-portable-anymap
                    [ppm] => image/x-portable-pixmap
                    [ras] => image/cmu-raster
                    [rgb] => image/x-rgb
                    [tif] => image/tiff
                    [tiff] => image/tiff
                    [xbm] => image/x-xbitmap
                    [xpm] => image/x-xpixmap
                    [xwd] => image/x-xwindowdump
                    [psd] => Array
                        (
                            [0] => application/photoshop
                            [1] => application/psd
                            [2] => image/psd
                            [3] => image/x-photoshop
                            [4] => image/photoshop
                            [5] => zz-application/zz-winassoc-psd
                        )

                    [ice] => x-conference/x-cooltalk
                    [iges] => model/iges
                    [igs] => model/iges
                    [mesh] => model/mesh
                    [msh] => model/mesh
                    [silo] => model/mesh
                    [vrml] => model/vrml
                    [wrl] => model/vrml
                    [mime] => www/mime
                    [pdb] => chemical/x-pdb
                    [xyz] => chemical/x-pdb
                    [javascript] => application/javascript
                    [form] => application/x-www-form-urlencoded
                    [file] => multipart/form-data
                    [xhtml] => Array
                        (
                            [0] => application/xhtml+xml
                            [1] => application/xhtml
                            [2] => text/xhtml
                        )

                    [xhtml-mobile] => application/vnd.wap.xhtml+xml
                    [atom] => application/atom+xml
                    [amf] => application/x-amf
                    [wap] => Array
                        (
                            [0] => text/vnd.wap.wml
                            [1] => text/vnd.wap.wmlscript
                            [2] => image/vnd.wap.wbmp
                        )

                    [wml] => text/vnd.wap.wml
                    [wmlscript] => text/vnd.wap.wmlscript
                    [wbmp] => image/vnd.wap.wbmp
                    [woff] => application/x-font-woff
                    [webp] => image/webp
                    [appcache] => text/cache-manifest
                    [manifest] => text/cache-manifest
                    [htc] => text/x-component
                    [rdf] => application/xml
                    [crx] => application/x-chrome-extension
                    [oex] => application/x-opera-extension
                    [xpi] => application/x-xpinstall
                    [safariextz] => application/octet-stream
                    [webapp] => application/x-web-app-manifest+json
                    [vcf] => text/x-vcard
                    [vtt] => text/vtt
                    [mkv] => video/x-matroska
                    [pkpass] => application/vnd.apple.pkpass
                    [ajax] => text/html
                )

            [_protocol:protected] => HTTP/1.1
            [_status:protected] => 200
            [_contentType:protected] => text/html
            [_headers:protected] => Array
                (
                )

            [_body:protected] => 
            [_file:protected] => 
            [_fileRange:protected] => 
            [_charset:protected] => UTF-8
            [_cacheDirectives:protected] => Array
                (
                )

            [_cookies:protected] => Array
                (
                )

        )

    [_responseClass:protected] => CakeResponse
    [viewPath] => Orthologs
    [layoutPath] => 
    [viewVars] => Array
        (
            [sidebar] => gene_sidebar
            [navigation_bar_info] => Array
                (
                    [num_colinearity_runs] => 1
                    [num_colinearity_with_dating_runs] => 0
                    [num_functional_clusters_runs] => 6
                    [has_pan_genomes] => 
                    [has_blast_db] => 1
                )

            [sidebar_information] => Array
                (
                    [type] => gene_id
                    [id] => SGA_v2.0_scaffold74G24624
                )

            [num_orthologs] => 2
            [num_paralogs] => 2
            [supporting_types] => Array
                (
                    [cds_length] => Array
                        (
                            [color] => B00
                            [order] => 1
                            [full_name] => CDS length
                        )

                    [num_exons] => Array
                        (
                            [color] => F0E68C
                            [order] => 2
                            [full_name] => #Exons
                        )

                    [gc] => Array
                        (
                            [color] => 2F4F4F
                            [order] => 3
                            [full_name] => GC content
                        )

                )

            [ortholog_types] => Array
                (
                    [TROG] => Array
                        (
                            [color] => 1F96D8
                            [order] => 1
                            [full_name] => Tree-based ortholog
                            [linkout] => /genes/gene_redirect/%GENE_ID_X%/hom_tree/
                        )

                    [ORTHO] => Array
                        (
                            [color] => 1FC610
                            [order] => 2
                            [full_name] => Orthologous gene family
                            [linkout] => /genes/gene_redirect/%GENE_ID_X%/ortho/
                        )

                    [anchor_point] => Array
                        (
                            [color] => D76414
                            [order] => 3
                            [full_name] => Colinearity
                            [linkout] => /genes/gene_redirect/%GENE_ID_X%/multiplicon/%GENE_ID_Y%/
                        )

                    [BHIF] => Array
                        (
                            [color] => 960AA0
                            [order] => 4
                            [full_name] => Best-Hits-and-Inparalogs(BHI)family
                            [linkout] => /genes/gene_redirect/%GENE_ID_X%/blast_results
                        )

                )

            [all_organisms] => Array
                (
                    [acertr] => Array
                        (
                            [species] => acertr
                            [common_name] => Acer truncatum
                            [tax_id] => 47965
                            [version] => v2.0
                        )

                    [ach] => Array
                        (
                            [species] => ach
                            [common_name] => Actinidia chinensis
                            [tax_id] => 3625
                            [version] => V3.0
                        )

                    [aar] => Array
                        (
                            [species] => aar
                            [common_name] => Aethionema arabicum
                            [tax_id] => 228871
                            [version] => v3.1
                        )

                    [amhyb] => Array
                        (
                            [species] => amhyb
                            [common_name] => Amaranthus hybridus
                            [tax_id] => 3565
                            [version] => v1.0
                        )

                    [atr] => Array
                        (
                            [species] => atr
                            [common_name] => Amborella trichopoda
                            [tax_id] => 13333
                            [version] => JGI v1.0
                        )

                    [aag] => Array
                        (
                            [species] => aag
                            [common_name] => Anthoceros agrestis
                            [tax_id] => 41834
                            [version] => v1.1
                        )

                    [aox] => Array
                        (
                            [species] => aox
                            [common_name] => Aquilegia oxysepala
                            [tax_id] => 432649
                            [version] => v1.0
                        )

                    [aly] => Array
                        (
                            [species] => aly
                            [common_name] => Arabidopsis lyrata
                            [tax_id] => 59689
                            [version] => JGI v2.1
                        )

                    [ath] => Array
                        (
                            [species] => ath
                            [common_name] => Arabidopsis thaliana
                            [tax_id] => 3702
                            [version] => Araport11
                        )

                    [arhy] => Array
                        (
                            [species] => arhy
                            [common_name] => Arachis hypogaea
                            [tax_id] => 3818
                            [version] => v1.0
                        )

                    [ama] => Array
                        (
                            [species] => ama
                            [common_name] => Avicennia marina
                            [tax_id] => 82927
                            [version] => v1.1 20200527
                        )

                    [bvu] => Array
                        (
                            [species] => bvu
                            [common_name] => Beta vulgaris
                            [tax_id] => 161934
                            [version] => EL10_1.0
                        )

                    [bca] => Array
                        (
                            [species] => bca
                            [common_name] => Brassica carinata
                            [tax_id] => 52824
                            [version] => V1.0
                        )

                    [bna] => Array
                        (
                            [species] => bna
                            [common_name] => Brassica napus
                            [tax_id] => 3708
                            [version] => v2.0
                        )

                    [bol] => Array
                        (
                            [species] => bol
                            [common_name] => Brassica oleracea
                            [tax_id] => 109376
                            [version] => v1.0
                        )

                    [bra] => Array
                        (
                            [species] => bra
                            [common_name] => Brassica rapa
                            [tax_id] => 3711
                            [version] => v1.0
                        )

                    [camsi] => Array
                        (
                            [species] => camsi
                            [common_name] => Camellia sinensis var. sinensis
                            [tax_id] => 542762
                            [version] => CSS_ChrLev_20200506
                        )

                    [cansat] => Array
                        (
                            [species] => cansat
                            [common_name] => Cannabis sativa
                            [tax_id] => 3483
                            [version] => cs10
                        )

                    [cru] => Array
                        (
                            [species] => cru
                            [common_name] => Capsella rubella
                            [tax_id] => 81985
                            [version] => JGI v1.1
                        )

                    [can] => Array
                        (
                            [species] => can
                            [common_name] => Capsicum annuum
                            [tax_id] => 4072
                            [version] => Pepper Genome v2.0
                        )

                    [chi] => Array
                        (
                            [species] => chi
                            [common_name] => Cardamine hirsuta
                            [tax_id] => 50463
                            [version] => v1.0
                        )

                    [cpa] => Array
                        (
                            [species] => cpa
                            [common_name] => Carica papaya
                            [tax_id] => 3649
                            [version] => JGI ASGPB0.4
                        )

                    [cfa] => Array
                        (
                            [species] => cfa
                            [common_name] => Carpinus fangiana
                            [tax_id] => 176857
                            [version] => v1.0
                        )

                    [cil] => Array
                        (
                            [species] => cil
                            [common_name] => Carya illinoinensis
                            [tax_id] => 32201
                            [version] => v1.1
                        )

                    [cde] => Array
                        (
                            [species] => cde
                            [common_name] => Ceratophyllum demersum
                            [tax_id] => 4428
                            [version] => v1.0
                        )

                    [cbr] => Array
                        (
                            [species] => cbr
                            [common_name] => Chara braunii
                            [tax_id] => 69332
                            [version] => Cbr1.0
                        )

                    [cqu] => Array
                        (
                            [species] => cqu
                            [common_name] => Chenopodium quinoa
                            [tax_id] => 63459
                            [version] => KAUST v1.0
                        )

                    [cre] => Array
                        (
                            [species] => cre
                            [common_name] => Chlamydomonas reinhardtii
                            [tax_id] => 3055
                            [version] => JGI v5.5
                        )

                    [car] => Array
                        (
                            [species] => car
                            [common_name] => Cicer arietinum L.
                            [tax_id] => 3827
                            [version] => v3.0
                        )

                    [cla] => Array
                        (
                            [species] => cla
                            [common_name] => Citrullus lanatus
                            [tax_id] => 3654
                            [version] => WCG v2.0
                        )

                    [ccl] => Array
                        (
                            [species] => ccl
                            [common_name] => Citrus clementina
                            [tax_id] => 85681
                            [version] => JGI v1.0
                        )

                    [ccan] => Array
                        (
                            [species] => ccan
                            [common_name] => Coffea canephora
                            [tax_id] => 49390
                            [version] => Coffee Genome Hub v1
                        )

                    [col] => Array
                        (
                            [species] => col
                            [common_name] => Corchorus olitorius
                            [tax_id] => 93759
                            [version] => GenBank v1.0
                        )

                    [cav] => Array
                        (
                            [species] => cav
                            [common_name] => Corylus avellana
                            [tax_id] => 13451
                            [version] => v1.0
                        )

                    [cme] => Array
                        (
                            [species] => cme
                            [common_name] => Cucumis melo
                            [tax_id] => 3656
                            [version] => Melonomics v3.6.1
                        )

                    [csa] => Array
                        (
                            [species] => csa
                            [common_name] => Cucumis sativus L.
                            [tax_id] => 3659
                            [version] => v3.0
                        )

                    [dca] => Array
                        (
                            [species] => dca
                            [common_name] => Daucus carota
                            [tax_id] => 4039
                            [version] => JGI v2.0
                        )

                    [din] => Array
                        (
                            [species] => din
                            [common_name] => Davidia involucrata
                            [tax_id] => 16924
                            [version] => v1.0
                        )

                    [dzi] => Array
                        (
                            [species] => dzi
                            [common_name] => Durio zibethinus
                            [tax_id] => 66656
                            [version] => Duzib1.0
                        )

                    [eca] => Array
                        (
                            [species] => eca
                            [common_name] => Erigeron canadensis
                            [tax_id] => 72917
                            [version] => V1.0
                        )

                    [egut] => Array
                        (
                            [species] => egut
                            [common_name] => Erythranthe guttata
                            [tax_id] => 4155
                            [version] => v2.0
                        )

                    [egr] => Array
                        (
                            [species] => egr
                            [common_name] => Eucalyptus grandis
                            [tax_id] => 71139
                            [version] => v2.0
                        )

                    [esa] => Array
                        (
                            [species] => esa
                            [common_name] => Eutrema salsugineum
                            [tax_id] => 72664
                            [version] => v1.0
                        )

                    [fve] => Array
                        (
                            [species] => fve
                            [common_name] => Fragaria vesca
                            [tax_id] => 57918
                            [version] => V4.0.a2
                        )

                    [fan] => Array
                        (
                            [species] => fan
                            [common_name] => Fragaria x ananassa
                            [tax_id] => 3747
                            [version] => V1.0.a1
                        )

                    [gma] => Array
                        (
                            [species] => gma
                            [common_name] => Glycine max
                            [tax_id] => 3847
                            [version] => JGI Wm82.a4.v1
                        )

                    [ghi] => Array
                        (
                            [species] => ghi
                            [common_name] => Gossypium hirsutum
                            [tax_id] => 3635
                            [version] => v2.1
                        )

                    [gra] => Array
                        (
                            [species] => gra
                            [common_name] => Gossypium raimondii
                            [tax_id] => 29730
                            [version] => v2.1
                        )

                    [han] => Array
                        (
                            [species] => han
                            [common_name] => Helianthus annuus
                            [tax_id] => 4232
                            [version] => r1.2
                        )

                    [hma] => Array
                        (
                            [species] => hma
                            [common_name] => Hydrangea macrophylla
                            [tax_id] => 23110
                            [version] => v2.1
                        )

                    [lsa] => Array
                        (
                            [species] => lsa
                            [common_name] => Lactuca sativa
                            [tax_id] => 4236
                            [version] => v8.0
                        )

                    [lonja] => Array
                        (
                            [species] => lonja
                            [common_name] => Lonicera japonica
                            [tax_id] => 105884
                            [version] => v1.0
                        )

                    [lja] => Array
                        (
                            [species] => lja
                            [common_name] => Lotus japonicus
                            [tax_id] => 34305
                            [version] => Lj1.0v1
                        )

                    [lal] => Array
                        (
                            [species] => lal
                            [common_name] => Lupinus albus
                            [tax_id] => 3870
                            [version] => v1.0
                        )

                    [mbi] => Array
                        (
                            [species] => mbi
                            [common_name] => Magnolia biondii
                            [tax_id] => 86725
                            [version] => v1.0
                        )

                    [mdo] => Array
                        (
                            [species] => mdo
                            [common_name] => Malus domestica
                            [tax_id] => 3750
                            [version] => GDDH13 v1.1
                        )

                    [mes] => Array
                        (
                            [species] => mes
                            [common_name] => Manihot esculenta
                            [tax_id] => 3983
                            [version] => v8.1
                        )

                    [mpo] => Array
                        (
                            [species] => mpo
                            [common_name] => Marchantia polymorpha
                            [tax_id] => 3197
                            [version] => JGI v3.1
                        )

                    [mtr] => Array
                        (
                            [species] => mtr
                            [common_name] => Medicago truncatula
                            [tax_id] => 3880
                            [version] => JGI Mt4.0v1
                        )

                    [mco] => Array
                        (
                            [species] => mco
                            [common_name] => Micromonas commoda
                            [tax_id] => 296587
                            [version] => JGI v3.0
                        )

                    [nnu] => Array
                        (
                            [species] => nnu
                            [common_name] => Nelumbo nucifera
                            [tax_id] => 4432
                            [version] => v2.0
                        )

                    [nta] => Array
                        (
                            [species] => nta
                            [common_name] => Nicotiana tabacum
                            [tax_id] => 4097
                            [version] => Edwards2017
                        )

                    [oeu] => Array
                        (
                            [species] => oeu
                            [common_name] => Olea europaea
                            [tax_id] => 4146
                            [version] => v1.0
                        )

                    [osa] => Array
                        (
                            [species] => osa
                            [common_name] => Oryza sativa ssp. japonica
                            [tax_id] => 39947
                            [version] => IRGSP-1.0-2021-05-10
                        )

                    [pso] => Array
                        (
                            [species] => pso
                            [common_name] => Papaver somniferum
                            [tax_id] => 3469
                            [version] => ASM357369v1
                        )

                    [pax] => Array
                        (
                            [species] => pax
                            [common_name] => Petunia axillaris
                            [tax_id] => 33119
                            [version] => Sol Genomics v1.6.2
                        )

                    [pvu] => Array
                        (
                            [species] => pvu
                            [common_name] => Phaseolus vulgaris
                            [tax_id] => 3885
                            [version] => v2.1
                        )

                    [ppa] => Array
                        (
                            [species] => ppa
                            [common_name] => Physcomitrium patens
                            [tax_id] => 3218
                            [version] => JGI v3.3
                        )

                    [psa] => Array
                        (
                            [species] => psa
                            [common_name] => Pisum sativum
                            [tax_id] => 3888
                            [version] => V1.0a
                        )

                    [ptr] => Array
                        (
                            [species] => ptr
                            [common_name] => Populus trichocarpa
                            [tax_id] => 3694
                            [version] => JGI v4.1
                        )

                    [pco] => Array
                        (
                            [species] => pco
                            [common_name] => Prasinoderma coloniale
                            [tax_id] => 156133
                            [version] => v1.0
                        )

                    [ppe] => Array
                        (
                            [species] => ppe
                            [common_name] => Prunus persica
                            [tax_id] => 3760
                            [version] => v2.1
                        )

                    [pgr] => Array
                        (
                            [species] => pgr
                            [common_name] => Punica granatum
                            [tax_id] => 22663
                            [version] => ASM765513v2
                        )

                    [qlo] => Array
                        (
                            [species] => qlo
                            [common_name] => Quercus lobata
                            [tax_id] => 97700
                            [version] => v3.0
                        )

                    [rsi] => Array
                        (
                            [species] => rsi
                            [common_name] => Rhododendron simsii
                            [tax_id] => 118357
                            [version] => v1.0
                        )

                    [rch] => Array
                        (
                            [species] => rch
                            [common_name] => Rosa chinensis
                            [tax_id] => 74649
                            [version] => v2.0
                        )

                    [sbr] => Array
                        (
                            [species] => sbr
                            [common_name] => Salix brachista
                            [tax_id] => 2182728
                            [version] => v1.0
                        )

                    [sbo] => Array
                        (
                            [species] => sbo
                            [common_name] => Salvia bowleyana
                            [tax_id] => 424416
                            [version] => v1.0
                        )

                    [shi] => Array
                        (
                            [species] => shi
                            [common_name] => Sapria himalayana
                            [tax_id] => 289637
                            [version] => v1.0
                        )

                    [spa] => Array
                        (
                            [species] => spa
                            [common_name] => Schrenkiella parvula
                            [tax_id] => 98039
                            [version] => v2.2
                        )

                    [sed] => Array
                        (
                            [species] => sed
                            [common_name] => Sechium edule
                            [tax_id] => 184140
                            [version] => v1.0
                        )

                    [smo] => Array
                        (
                            [species] => smo
                            [common_name] => Selaginella moellendorffii
                            [tax_id] => 88036
                            [version] => v1.0
                        )

                    [sun] => Array
                        (
                            [species] => sun
                            [common_name] => Selenicereus undatus
                            [tax_id] => 176265
                            [version] => v1.0
                        )

                    [sgi] => Array
                        (
                            [species] => sgi
                            [common_name] => Sequoiadendron giganteum
                            [tax_id] => 99814
                            [version] => V2.0
                        )

                    [sci] => Array
                        (
                            [species] => sci
                            [common_name] => Simmondsia chinensis
                            [tax_id] => 3999
                            [version] => sc1
                        )

                    [sly] => Array
                        (
                            [species] => sly
                            [common_name] => Solanum lycopersicum
                            [tax_id] => 4081
                            [version] => ITAG4.0
                        )

                    [spe] => Array
                        (
                            [species] => spe
                            [common_name] => Solanum pennellii
                            [tax_id] => 28526
                            [version] => V2.0
                        )

                    [stu] => Array
                        (
                            [species] => stu
                            [common_name] => Solanum tuberosum
                            [tax_id] => 4113
                            [version] => JGI v4.03
                        )

                    [sas] => Array
                        (
                            [species] => sas
                            [common_name] => Striga asiatica
                            [tax_id] => 4170
                            [version] => v2.02
                        )

                    [tha] => Array
                        (
                            [species] => tha
                            [common_name] => Tarenaya hassleriana
                            [tax_id] => 28532
                            [version] => RefSeq v1
                        )

                    [tca] => Array
                        (
                            [species] => tca
                            [common_name] => Theobroma cacao
                            [tax_id] => 3641
                            [version] => V2.1
                        )

                    [tpr] => Array
                        (
                            [species] => tpr
                            [common_name] => Trifolium pratense
                            [tax_id] => 57577
                            [version] => V2.0
                        )

                    [twi] => Array
                        (
                            [species] => twi
                            [common_name] => Tripterygium wilfordii
                            [tax_id] => 458696
                            [version] => ASM1340144v1
                        )

                    [tar] => Array
                        (
                            [species] => tar
                            [common_name] => Trochodendron aralioides
                            [tax_id] => 4407
                            [version] => v1.0
                        )

                    [ugi] => Array
                        (
                            [species] => ugi
                            [common_name] => Utricularia gibba
                            [tax_id] => 13748
                            [version] => v1.1F
                        )

                    [vma] => Array
                        (
                            [species] => vma
                            [common_name] => Vaccinium macrocarpon
                            [tax_id] => 13750
                            [version] => V1.0
                        )

                    [vpl] => Array
                        (
                            [species] => vpl
                            [common_name] => Vanilla planifolia
                            [tax_id] => 51239
                            [version] => Elo Vpla-A Principal v1.0
                        )

                    [vmu] => Array
                        (
                            [species] => vmu
                            [common_name] => Vigna mungo
                            [tax_id] => 3915
                            [version] => ASM1342719v1
                        )

                    [vvi] => Array
                        (
                            [species] => vvi
                            [common_name] => Vitis vinifera
                            [tax_id] => 29760
                            [version] => Genoscope.12x
                        )

                    [zma] => Array
                        (
                            [species] => zma
                            [common_name] => Zea mays
                            [tax_id] => 4577
                            [version] => NAM v5.0
                        )

                )

            [target_species] => spa
            [query_species] => sas
            [query_gene] => SGA_v2.0_scaffold74G24624
            [title_for_layout] => Dicots PLAZA 5.0 : Integrative Orthology
        )

    [view] => explore
    [layout] => toolbox_layout
    [autoRender] => 1
    [autoLayout] => 1
    [Components] => ComponentCollection Object
        (
            [_Controller:protected] => OrthologsController Object
 *RECURSION*
            [_enabled:protected] => Array
                (
                    [Session] => Array
                        (
                            [0] => 10
                            [1] => 1
                        )

                    [DataUtils] => Array
                        (
                            [0] => 10
                            [1] => 2
                        )

                    [FunctionalAnnotationUtils] => Array
                        (
                            [0] => 10
                            [1] => 3
                        )

                    [GeneFamilies] => Array
                        (
                            [0] => 10
                            [1] => 4
                        )

                    [Organism] => Array
                        (
                            [0] => 10
                            [1] => 5
                        )

                    [Blast] => Array
                        (
                            [0] => 10
                            [1] => 6
                        )

                    [WorkbenchUtils] => Array
                        (
                            [0] => 10
                            [1] => 7
                        )

                    [Orthology] => Array
                        (
                            [0] => 10
                            [1] => 8
                        )

                )

            [_loaded:protected] => Array
                (
                    [Session] => SessionComponent Object
                        (
                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                            [settings] => Array
                                (
                                )

                            [components] => Array
                                (
                                )

                            [_componentMap:protected] => Array
                                (
                                )

                        )

                    [DataUtils] => DataUtilsComponent Object
                        (
                            [name] => DataUtils
                            [controller] => OrthologsController Object
 *RECURSION*
                            [components] => Array
                                (
                                    [0] => ExternalPrograms
                                    [1] => FunctionalUtils
                                    [2] => GeneFamilies
                                    [3] => GenomeBrowser
                                )

                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                            [settings] => Array
                                (
                                )

                            [_componentMap:protected] => Array
                                (
                                    [ExternalPrograms] => Array
                                        (
                                            [class] => ExternalPrograms
                                            [settings] => Array
                                                (
                                                )

                                        )

                                    [FunctionalUtils] => Array
                                        (
                                            [class] => FunctionalUtils
                                            [settings] => Array
                                                (
                                                )

                                        )

                                    [GeneFamilies] => Array
                                        (
                                            [class] => GeneFamilies
                                            [settings] => Array
                                                (
                                                )

                                        )

                                    [GenomeBrowser] => Array
                                        (
                                            [class] => GenomeBrowser
                                            [settings] => Array
                                                (
                                                )

                                        )

                                )

                            [GeneFamilies] => GeneFamiliesComponent Object
                                (
                                    [name] => GeneFamilies
                                    [controller:GeneFamiliesComponent:private] => OrthologsController Object
 *RECURSION*
                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [components] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                        )

                                )

                        )

                    [FunctionalAnnotationUtils] => FunctionalAnnotationUtilsComponent Object
                        (
                            [name] => FunctionalAnnotationUtils
                            [controller] => OrthologsController Object
 *RECURSION*
                            [components] => Array
                                (
                                    [0] => FunctionalUtils
                                )

                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                            [settings] => Array
                                (
                                )

                            [_componentMap:protected] => Array
                                (
                                    [FunctionalUtils] => Array
                                        (
                                            [class] => FunctionalUtils
                                            [settings] => Array
                                                (
                                                )

                                        )

                                )

                        )

                    [GeneFamilies] => GeneFamiliesComponent Object
                        (
                            [name] => GeneFamilies
                            [controller:GeneFamiliesComponent:private] => OrthologsController Object
 *RECURSION*
                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                            [settings] => Array
                                (
                                )

                            [components] => Array
                                (
                                )

                            [_componentMap:protected] => Array
                                (
                                )

                        )

                    [Organism] => OrganismComponent Object
                        (
                            [name] => Organism
                            [controller:OrganismComponent:private] => OrthologsController Object
 *RECURSION*
                            [components] => Array
                                (
                                    [0] => GenomeBrowser
                                )

                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                            [settings] => Array
                                (
                                )

                            [_componentMap:protected] => Array
                                (
                                    [GenomeBrowser] => Array
                                        (
                                            [class] => GenomeBrowser
                                            [settings] => Array
                                                (
                                                )

                                        )

                                )

                        )

                    [Blast] => BlastComponent Object
                        (
                            [name] => Blast
                            [controller] => OrthologsController Object
 *RECURSION*
                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                            [settings] => Array
                                (
                                )

                            [components] => Array
                                (
                                )

                            [_componentMap:protected] => Array
                                (
                                )

                        )

                    [WorkbenchUtils] => WorkbenchUtilsComponent Object
                        (
                            [name] => WorkbenchUtils
                            [controller:WorkbenchUtilsComponent:private] => OrthologsController Object
 *RECURSION*
                            [components] => Array
                                (
                                    [0] => ExternalPrograms
                                    [1] => FormUtils
                                    [2] => FunctionalUtils
                                    [3] => GeneFamilies
                                    [4] => WorkbenchSharedAccessRights
                                )

                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                            [settings] => Array
                                (
                                )

                            [_componentMap:protected] => Array
                                (
                                    [ExternalPrograms] => Array
                                        (
                                            [class] => ExternalPrograms
                                            [settings] => Array
                                                (
                                                )

                                        )

                                    [FormUtils] => Array
                                        (
                                            [class] => FormUtils
                                            [settings] => Array
                                                (
                                                )

                                        )

                                    [FunctionalUtils] => Array
                                        (
                                            [class] => FunctionalUtils
                                            [settings] => Array
                                                (
                                                )

                                        )

                                    [GeneFamilies] => Array
                                        (
                                            [class] => GeneFamilies
                                            [settings] => Array
                                                (
                                                )

                                        )

                                    [WorkbenchSharedAccessRights] => Array
                                        (
                                            [class] => WorkbenchSharedAccessRights
                                            [settings] => Array
                                                (
                                                )

                                        )

                                )

                        )

                    [Orthology] => OrthologyComponent Object
                        (
                            [name] => Orthology
                            [controller:OrthologyComponent:private] => OrthologsController Object
 *RECURSION*
                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                            [settings] => Array
                                (
                                )

                            [components] => Array
                                (
                                )

                            [_componentMap:protected] => Array
                                (
                                )

                        )

                )

            [defaultPriority] => 10
        )

    [viewClass] => View
    [View] => 
    [ext] => .ctp
    [plugin] => 
    [cacheAction] => 
    [passedArgs] => Array
        (
            [0] => SGA_v2.0_scaffold74G24624
            [1] => spa
        )

    [scaffold] => 
    [methods] => Array
        (
            [1] => overview
            [2] => explore
            [3] => get_orthologs_type_data
            [4] => get_supporting_data
            [5] => get_supporting_type_data
            [6] => get_orthologs_data
        )

    [modelClass] => Annotation
    [modelKey] => ortholog
    [validationErrors] => 
    [_mergeParent:protected] => AppController
    [_eventManager:protected] => CakeEventManager Object
        (
            [_listeners:protected] => Array
                (
                    [Controller.initialize] => Array
                        (
                            [10] => Array
                                (
                                    [0] => Array
                                        (
                                            [callable] => Array
                                                (
                                                    [0] => ComponentCollection Object
                                                        (
                                                            [_Controller:protected] => OrthologsController Object
 *RECURSION*
                                                            [_enabled:protected] => Array
                                                                (
                                                                    [Session] => Array
                                                                        (
                                                                            [0] => 10
                                                                            [1] => 1
                                                                        )

                                                                    [DataUtils] => Array
                                                                        (
                                                                            [0] => 10
                                                                            [1] => 2
                                                                        )

                                                                    [FunctionalAnnotationUtils] => Array
                                                                        (
                                                                            [0] => 10
                                                                            [1] => 3
                                                                        )

                                                                    [GeneFamilies] => Array
                                                                        (
                                                                            [0] => 10
                                                                            [1] => 4
                                                                        )

                                                                    [Organism] => Array
                                                                        (
                                                                            [0] => 10
                                                                            [1] => 5
                                                                        )

                                                                    [Blast] => Array
                                                                        (
                                                                            [0] => 10
                                                                            [1] => 6
                                                                        )

                                                                    [WorkbenchUtils] => Array
                                                                        (
                                                                            [0] => 10
                                                                            [1] => 7
                                                                        )

                                                                    [Orthology] => Array
                                                                        (
                                                                            [0] => 10
                                                                            [1] => 8
                                                                        )

                                                                )

                                                            [_loaded:protected] => Array
                                                                (
                                                                    [Session] => SessionComponent Object
                                                                        (
                                                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                                                            [settings] => Array
                                                                                (
                                                                                )

                                                                            [components] => Array
                                                                                (
                                                                                )

                                                                            [_componentMap:protected] => Array
                                                                                (
                                                                                )

                                                                        )

                                                                    [DataUtils] => DataUtilsComponent Object
                                                                        (
                                                                            [name] => DataUtils
                                                                            [controller] => OrthologsController Object
 *RECURSION*
                                                                            [components] => Array
                                                                                (
                                                                                    [0] => ExternalPrograms
                                                                                    [1] => FunctionalUtils
                                                                                    [2] => GeneFamilies
                                                                                    [3] => GenomeBrowser
                                                                                )

                                                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                                                            [settings] => Array
                                                                                (
                                                                                )

                                                                            [_componentMap:protected] => Array
                                                                                (
                                                                                    [ExternalPrograms] => Array
                                                                                        (
                                                                                            [class] => ExternalPrograms
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                    [FunctionalUtils] => Array
                                                                                        (
                                                                                            [class] => FunctionalUtils
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                    [GeneFamilies] => Array
                                                                                        (
                                                                                            [class] => GeneFamilies
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                    [GenomeBrowser] => Array
                                                                                        (
                                                                                            [class] => GenomeBrowser
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                )

                                                                            [GeneFamilies] => GeneFamiliesComponent Object
                                                                                (
                                                                                    [name] => GeneFamilies
                                                                                    [controller:GeneFamiliesComponent:private] => OrthologsController Object
 *RECURSION*
                                                                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                                                                    [settings] => Array
                                                                                        (
                                                                                        )

                                                                                    [components] => Array
                                                                                        (
                                                                                        )

                                                                                    [_componentMap:protected] => Array
                                                                                        (
                                                                                        )

                                                                                )

                                                                        )

                                                                    [FunctionalAnnotationUtils] => FunctionalAnnotationUtilsComponent Object
                                                                        (
                                                                            [name] => FunctionalAnnotationUtils
                                                                            [controller] => OrthologsController Object
 *RECURSION*
                                                                            [components] => Array
                                                                                (
                                                                                    [0] => FunctionalUtils
                                                                                )

                                                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                                                            [settings] => Array
                                                                                (
                                                                                )

                                                                            [_componentMap:protected] => Array
                                                                                (
                                                                                    [FunctionalUtils] => Array
                                                                                        (
                                                                                            [class] => FunctionalUtils
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                )

                                                                        )

                                                                    [GeneFamilies] => GeneFamiliesComponent Object
                                                                        (
                                                                            [name] => GeneFamilies
                                                                            [controller:GeneFamiliesComponent:private] => OrthologsController Object
 *RECURSION*
                                                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                                                            [settings] => Array
                                                                                (
                                                                                )

                                                                            [components] => Array
                                                                                (
                                                                                )

                                                                            [_componentMap:protected] => Array
                                                                                (
                                                                                )

                                                                        )

                                                                    [Organism] => OrganismComponent Object
                                                                        (
                                                                            [name] => Organism
                                                                            [controller:OrganismComponent:private] => OrthologsController Object
 *RECURSION*
                                                                            [components] => Array
                                                                                (
                                                                                    [0] => GenomeBrowser
                                                                                )

                                                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                                                            [settings] => Array
                                                                                (
                                                                                )

                                                                            [_componentMap:protected] => Array
                                                                                (
                                                                                    [GenomeBrowser] => Array
                                                                                        (
                                                                                            [class] => GenomeBrowser
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                )

                                                                        )

                                                                    [Blast] => BlastComponent Object
                                                                        (
                                                                            [name] => Blast
                                                                            [controller] => OrthologsController Object
 *RECURSION*
                                                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                                                            [settings] => Array
                                                                                (
                                                                                )

                                                                            [components] => Array
                                                                                (
                                                                                )

                                                                            [_componentMap:protected] => Array
                                                                                (
                                                                                )

                                                                        )

                                                                    [WorkbenchUtils] => WorkbenchUtilsComponent Object
                                                                        (
                                                                            [name] => WorkbenchUtils
                                                                            [controller:WorkbenchUtilsComponent:private] => OrthologsController Object
 *RECURSION*
                                                                            [components] => Array
                                                                                (
                                                                                    [0] => ExternalPrograms
                                                                                    [1] => FormUtils
                                                                                    [2] => FunctionalUtils
                                                                                    [3] => GeneFamilies
                                                                                    [4] => WorkbenchSharedAccessRights
                                                                                )

                                                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                                                            [settings] => Array
                                                                                (
                                                                                )

                                                                            [_componentMap:protected] => Array
                                                                                (
                                                                                    [ExternalPrograms] => Array
                                                                                        (
                                                                                            [class] => ExternalPrograms
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                    [FormUtils] => Array
                                                                                        (
                                                                                            [class] => FormUtils
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                    [FunctionalUtils] => Array
                                                                                        (
                                                                                            [class] => FunctionalUtils
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                    [GeneFamilies] => Array
                                                                                        (
                                                                                            [class] => GeneFamilies
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                    [WorkbenchSharedAccessRights] => Array
                                                                                        (
                                                                                            [class] => WorkbenchSharedAccessRights
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                )

                                                                        )

                                                                    [Orthology] => OrthologyComponent Object
                                                                        (
                                                                            [name] => Orthology
                                                                            [controller:OrthologyComponent:private] => OrthologsController Object
 *RECURSION*
                                                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                                                            [settings] => Array
                                                                                (
                                                                                )

                                                                            [components] => Array
                                                                                (
                                                                                )

                                                                            [_componentMap:protected] => Array
                                                                                (
                                                                                )

                                                                        )

                                                                )

                                                            [defaultPriority] => 10
                                                        )

                                                    [1] => trigger
                                                )

                                            [passParams] => 
                                        )

                                    [1] => Array
                                        (
                                            [callable] => Array
                                                (
                                                    [0] => OrthologsController Object
 *RECURSION*
                                                    [1] => beforeFilter
                                                )

                                            [passParams] => 
                                        )

                                )

                        )

                    [Controller.startup] => Array
                        (
                            [10] => Array
                                (
                                    [0] => Array
                                        (
                                            [callable] => Array
                                                (
                                                    [0] => ComponentCollection Object
                                                        (
                                                            [_Controller:protected] => OrthologsController Object
 *RECURSION*
                                                            [_enabled:protected] => Array
                                                                (
                                                                    [Session] => Array
                                                                        (
                                                                            [0] => 10
                                                                            [1] => 1
                                                                        )

                                                                    [DataUtils] => Array
                                                                        (
                                                                            [0] => 10
                                                                            [1] => 2
                                                                        )

                                                                    [FunctionalAnnotationUtils] => Array
                                                                        (
                                                                            [0] => 10
                                                                            [1] => 3
                                                                        )

                                                                    [GeneFamilies] => Array
                                                                        (
                                                                            [0] => 10
                                                                            [1] => 4
                                                                        )

                                                                    [Organism] => Array
                                                                        (
                                                                            [0] => 10
                                                                            [1] => 5
                                                                        )

                                                                    [Blast] => Array
                                                                        (
                                                                            [0] => 10
                                                                            [1] => 6
                                                                        )

                                                                    [WorkbenchUtils] => Array
                                                                        (
                                                                            [0] => 10
                                                                            [1] => 7
                                                                        )

                                                                    [Orthology] => Array
                                                                        (
                                                                            [0] => 10
                                                                            [1] => 8
                                                                        )

                                                                )

                                                            [_loaded:protected] => Array
                                                                (
                                                                    [Session] => SessionComponent Object
                                                                        (
                                                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                                                            [settings] => Array
                                                                                (
                                                                                )

                                                                            [components] => Array
                                                                                (
                                                                                )

                                                                            [_componentMap:protected] => Array
                                                                                (
                                                                                )

                                                                        )

                                                                    [DataUtils] => DataUtilsComponent Object
                                                                        (
                                                                            [name] => DataUtils
                                                                            [controller] => OrthologsController Object
 *RECURSION*
                                                                            [components] => Array
                                                                                (
                                                                                    [0] => ExternalPrograms
                                                                                    [1] => FunctionalUtils
                                                                                    [2] => GeneFamilies
                                                                                    [3] => GenomeBrowser
                                                                                )

                                                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                                                            [settings] => Array
                                                                                (
                                                                                )

                                                                            [_componentMap:protected] => Array
                                                                                (
                                                                                    [ExternalPrograms] => Array
                                                                                        (
                                                                                            [class] => ExternalPrograms
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                    [FunctionalUtils] => Array
                                                                                        (
                                                                                            [class] => FunctionalUtils
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                    [GeneFamilies] => Array
                                                                                        (
                                                                                            [class] => GeneFamilies
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                    [GenomeBrowser] => Array
                                                                                        (
                                                                                            [class] => GenomeBrowser
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                )

                                                                            [GeneFamilies] => GeneFamiliesComponent Object
                                                                                (
                                                                                    [name] => GeneFamilies
                                                                                    [controller:GeneFamiliesComponent:private] => OrthologsController Object
 *RECURSION*
                                                                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                                                                    [settings] => Array
                                                                                        (
                                                                                        )

                                                                                    [components] => Array
                                                                                        (
                                                                                        )

                                                                                    [_componentMap:protected] => Array
                                                                                        (
                                                                                        )

                                                                                )

                                                                        )

                                                                    [FunctionalAnnotationUtils] => FunctionalAnnotationUtilsComponent Object
                                                                        (
                                                                            [name] => FunctionalAnnotationUtils
                                                                            [controller] => OrthologsController Object
 *RECURSION*
                                                                            [components] => Array
                                                                                (
                                                                                    [0] => FunctionalUtils
                                                                                )

                                                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                                                            [settings] => Array
                                                                                (
                                                                                )

                                                                            [_componentMap:protected] => Array
                                                                                (
                                                                                    [FunctionalUtils] => Array
                                                                                        (
                                                                                            [class] => FunctionalUtils
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                )

                                                                        )

                                                                    [GeneFamilies] => GeneFamiliesComponent Object
                                                                        (
                                                                            [name] => GeneFamilies
                                                                            [controller:GeneFamiliesComponent:private] => OrthologsController Object
 *RECURSION*
                                                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                                                            [settings] => Array
                                                                                (
                                                                                )

                                                                            [components] => Array
                                                                                (
                                                                                )

                                                                            [_componentMap:protected] => Array
                                                                                (
                                                                                )

                                                                        )

                                                                    [Organism] => OrganismComponent Object
                                                                        (
                                                                            [name] => Organism
                                                                            [controller:OrganismComponent:private] => OrthologsController Object
 *RECURSION*
                                                                            [components] => Array
                                                                                (
                                                                                    [0] => GenomeBrowser
                                                                                )

                                                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                                                            [settings] => Array
                                                                                (
                                                                                )

                                                                            [_componentMap:protected] => Array
                                                                                (
                                                                                    [GenomeBrowser] => Array
                                                                                        (
                                                                                            [class] => GenomeBrowser
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                )

                                                                        )

                                                                    [Blast] => BlastComponent Object
                                                                        (
                                                                            [name] => Blast
                                                                            [controller] => OrthologsController Object
 *RECURSION*
                                                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                                                            [settings] => Array
                                                                                (
                                                                                )

                                                                            [components] => Array
                                                                                (
                                                                                )

                                                                            [_componentMap:protected] => Array
                                                                                (
                                                                                )

                                                                        )

                                                                    [WorkbenchUtils] => WorkbenchUtilsComponent Object
                                                                        (
                                                                            [name] => WorkbenchUtils
                                                                            [controller:WorkbenchUtilsComponent:private] => OrthologsController Object
 *RECURSION*
                                                                            [components] => Array
                                                                                (
                                                                                    [0] => ExternalPrograms
                                                                                    [1] => FormUtils
                                                                                    [2] => FunctionalUtils
                                                                                    [3] => GeneFamilies
                                                                                    [4] => WorkbenchSharedAccessRights
                                                                                )

                                                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                                                            [settings] => Array
                                                                                (
                                                                                )

                                                                            [_componentMap:protected] => Array
                                                                                (
                                                                                    [ExternalPrograms] => Array
                                                                                        (
                                                                                            [class] => ExternalPrograms
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                    [FormUtils] => Array
                                                                                        (
                                                                                            [class] => FormUtils
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                    [FunctionalUtils] => Array
                                                                                        (
                                                                                            [class] => FunctionalUtils
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                    [GeneFamilies] => Array
                                                                                        (
                                                                                            [class] => GeneFamilies
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                    [WorkbenchSharedAccessRights] => Array
                                                                                        (
                                                                                            [class] => WorkbenchSharedAccessRights
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                )

                                                                        )

                                                                    [Orthology] => OrthologyComponent Object
                                                                        (
                                                                            [name] => Orthology
                                                                            [controller:OrthologyComponent:private] => OrthologsController Object
 *RECURSION*
                                                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                                                            [settings] => Array
                                                                                (
                                                                                )

                                                                            [components] => Array
                                                                                (
                                                                                )

                                                                            [_componentMap:protected] => Array
                                                                                (
                                                                                )

                                                                        )

                                                                )

                                                            [defaultPriority] => 10
                                                        )

                                                    [1] => trigger
                                                )

                                            [passParams] => 
                                        )

                                )

                        )

                    [Controller.beforeRender] => Array
                        (
                            [10] => Array
                                (
                                    [0] => Array
                                        (
                                            [callable] => Array
                                                (
                                                    [0] => ComponentCollection Object
                                                        (
                                                            [_Controller:protected] => OrthologsController Object
 *RECURSION*
                                                            [_enabled:protected] => Array
                                                                (
                                                                    [Session] => Array
                                                                        (
                                                                            [0] => 10
                                                                            [1] => 1
                                                                        )

                                                                    [DataUtils] => Array
                                                                        (
                                                                            [0] => 10
                                                                            [1] => 2
                                                                        )

                                                                    [FunctionalAnnotationUtils] => Array
                                                                        (
                                                                            [0] => 10
                                                                            [1] => 3
                                                                        )

                                                                    [GeneFamilies] => Array
                                                                        (
                                                                            [0] => 10
                                                                            [1] => 4
                                                                        )

                                                                    [Organism] => Array
                                                                        (
                                                                            [0] => 10
                                                                            [1] => 5
                                                                        )

                                                                    [Blast] => Array
                                                                        (
                                                                            [0] => 10
                                                                            [1] => 6
                                                                        )

                                                                    [WorkbenchUtils] => Array
                                                                        (
                                                                            [0] => 10
                                                                            [1] => 7
                                                                        )

                                                                    [Orthology] => Array
                                                                        (
                                                                            [0] => 10
                                                                            [1] => 8
                                                                        )

                                                                )

                                                            [_loaded:protected] => Array
                                                                (
                                                                    [Session] => SessionComponent Object
                                                                        (
                                                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                                                            [settings] => Array
                                                                                (
                                                                                )

                                                                            [components] => Array
                                                                                (
                                                                                )

                                                                            [_componentMap:protected] => Array
                                                                                (
                                                                                )

                                                                        )

                                                                    [DataUtils] => DataUtilsComponent Object
                                                                        (
                                                                            [name] => DataUtils
                                                                            [controller] => OrthologsController Object
 *RECURSION*
                                                                            [components] => Array
                                                                                (
                                                                                    [0] => ExternalPrograms
                                                                                    [1] => FunctionalUtils
                                                                                    [2] => GeneFamilies
                                                                                    [3] => GenomeBrowser
                                                                                )

                                                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                                                            [settings] => Array
                                                                                (
                                                                                )

                                                                            [_componentMap:protected] => Array
                                                                                (
                                                                                    [ExternalPrograms] => Array
                                                                                        (
                                                                                            [class] => ExternalPrograms
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                    [FunctionalUtils] => Array
                                                                                        (
                                                                                            [class] => FunctionalUtils
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                    [GeneFamilies] => Array
                                                                                        (
                                                                                            [class] => GeneFamilies
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                    [GenomeBrowser] => Array
                                                                                        (
                                                                                            [class] => GenomeBrowser
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                )

                                                                            [GeneFamilies] => GeneFamiliesComponent Object
                                                                                (
                                                                                    [name] => GeneFamilies
                                                                                    [controller:GeneFamiliesComponent:private] => OrthologsController Object
 *RECURSION*
                                                                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                                                                    [settings] => Array
                                                                                        (
                                                                                        )

                                                                                    [components] => Array
                                                                                        (
                                                                                        )

                                                                                    [_componentMap:protected] => Array
                                                                                        (
                                                                                        )

                                                                                )

                                                                        )

                                                                    [FunctionalAnnotationUtils] => FunctionalAnnotationUtilsComponent Object
                                                                        (
                                                                            [name] => FunctionalAnnotationUtils
                                                                            [controller] => OrthologsController Object
 *RECURSION*
                                                                            [components] => Array
                                                                                (
                                                                                    [0] => FunctionalUtils
                                                                                )

                                                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                                                            [settings] => Array
                                                                                (
                                                                                )

                                                                            [_componentMap:protected] => Array
                                                                                (
                                                                                    [FunctionalUtils] => Array
                                                                                        (
                                                                                            [class] => FunctionalUtils
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                )

                                                                        )

                                                                    [GeneFamilies] => GeneFamiliesComponent Object
                                                                        (
                                                                            [name] => GeneFamilies
                                                                            [controller:GeneFamiliesComponent:private] => OrthologsController Object
 *RECURSION*
                                                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                                                            [settings] => Array
                                                                                (
                                                                                )

                                                                            [components] => Array
                                                                                (
                                                                                )

                                                                            [_componentMap:protected] => Array
                                                                                (
                                                                                )

                                                                        )

                                                                    [Organism] => OrganismComponent Object
                                                                        (
                                                                            [name] => Organism
                                                                            [controller:OrganismComponent:private] => OrthologsController Object
 *RECURSION*
                                                                            [components] => Array
                                                                                (
                                                                                    [0] => GenomeBrowser
                                                                                )

                                                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                                                            [settings] => Array
                                                                                (
                                                                                )

                                                                            [_componentMap:protected] => Array
                                                                                (
                                                                                    [GenomeBrowser] => Array
                                                                                        (
                                                                                            [class] => GenomeBrowser
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                )

                                                                        )

                                                                    [Blast] => BlastComponent Object
                                                                        (
                                                                            [name] => Blast
                                                                            [controller] => OrthologsController Object
 *RECURSION*
                                                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                                                            [settings] => Array
                                                                                (
                                                                                )

                                                                            [components] => Array
                                                                                (
                                                                                )

                                                                            [_componentMap:protected] => Array
                                                                                (
                                                                                )

                                                                        )

                                                                    [WorkbenchUtils] => WorkbenchUtilsComponent Object
                                                                        (
                                                                            [name] => WorkbenchUtils
                                                                            [controller:WorkbenchUtilsComponent:private] => OrthologsController Object
 *RECURSION*
                                                                            [components] => Array
                                                                                (
                                                                                    [0] => ExternalPrograms
                                                                                    [1] => FormUtils
                                                                                    [2] => FunctionalUtils
                                                                                    [3] => GeneFamilies
                                                                                    [4] => WorkbenchSharedAccessRights
                                                                                )

                                                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                                                            [settings] => Array
                                                                                (
                                                                                )

                                                                            [_componentMap:protected] => Array
                                                                                (
                                                                                    [ExternalPrograms] => Array
                                                                                        (
                                                                                            [class] => ExternalPrograms
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                    [FormUtils] => Array
                                                                                        (
                                                                                            [class] => FormUtils
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                    [FunctionalUtils] => Array
                                                                                        (
                                                                                            [class] => FunctionalUtils
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                    [GeneFamilies] => Array
                                                                                        (
                                                                                            [class] => GeneFamilies
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                    [WorkbenchSharedAccessRights] => Array
                                                                                        (
                                                                                            [class] => WorkbenchSharedAccessRights
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                )

                                                                        )

                                                                    [Orthology] => OrthologyComponent Object
                                                                        (
                                                                            [name] => Orthology
                                                                            [controller:OrthologyComponent:private] => OrthologsController Object
 *RECURSION*
                                                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                                                            [settings] => Array
                                                                                (
                                                                                )

                                                                            [components] => Array
                                                                                (
                                                                                )

                                                                            [_componentMap:protected] => Array
                                                                                (
                                                                                )

                                                                        )

                                                                )

                                                            [defaultPriority] => 10
                                                        )

                                                    [1] => trigger
                                                )

                                            [passParams] => 
                                        )

                                    [1] => Array
                                        (
                                            [callable] => Array
                                                (
                                                    [0] => OrthologsController Object
 *RECURSION*
                                                    [1] => beforeRender
                                                )

                                            [passParams] => 
                                        )

                                )

                        )

                    [Controller.beforeRedirect] => Array
                        (
                            [10] => Array
                                (
                                    [0] => Array
                                        (
                                            [callable] => Array
                                                (
                                                    [0] => ComponentCollection Object
                                                        (
                                                            [_Controller:protected] => OrthologsController Object
 *RECURSION*
                                                            [_enabled:protected] => Array
                                                                (
                                                                    [Session] => Array
                                                                        (
                                                                            [0] => 10
                                                                            [1] => 1
                                                                        )

                                                                    [DataUtils] => Array
                                                                        (
                                                                            [0] => 10
                                                                            [1] => 2
                                                                        )

                                                                    [FunctionalAnnotationUtils] => Array
                                                                        (
                                                                            [0] => 10
                                                                            [1] => 3
                                                                        )

                                                                    [GeneFamilies] => Array
                                                                        (
                                                                            [0] => 10
                                                                            [1] => 4
                                                                        )

                                                                    [Organism] => Array
                                                                        (
                                                                            [0] => 10
                                                                            [1] => 5
                                                                        )

                                                                    [Blast] => Array
                                                                        (
                                                                            [0] => 10
                                                                            [1] => 6
                                                                        )

                                                                    [WorkbenchUtils] => Array
                                                                        (
                                                                            [0] => 10
                                                                            [1] => 7
                                                                        )

                                                                    [Orthology] => Array
                                                                        (
                                                                            [0] => 10
                                                                            [1] => 8
                                                                        )

                                                                )

                                                            [_loaded:protected] => Array
                                                                (
                                                                    [Session] => SessionComponent Object
                                                                        (
                                                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                                                            [settings] => Array
                                                                                (
                                                                                )

                                                                            [components] => Array
                                                                                (
                                                                                )

                                                                            [_componentMap:protected] => Array
                                                                                (
                                                                                )

                                                                        )

                                                                    [DataUtils] => DataUtilsComponent Object
                                                                        (
                                                                            [name] => DataUtils
                                                                            [controller] => OrthologsController Object
 *RECURSION*
                                                                            [components] => Array
                                                                                (
                                                                                    [0] => ExternalPrograms
                                                                                    [1] => FunctionalUtils
                                                                                    [2] => GeneFamilies
                                                                                    [3] => GenomeBrowser
                                                                                )

                                                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                                                            [settings] => Array
                                                                                (
                                                                                )

                                                                            [_componentMap:protected] => Array
                                                                                (
                                                                                    [ExternalPrograms] => Array
                                                                                        (
                                                                                            [class] => ExternalPrograms
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                    [FunctionalUtils] => Array
                                                                                        (
                                                                                            [class] => FunctionalUtils
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                    [GeneFamilies] => Array
                                                                                        (
                                                                                            [class] => GeneFamilies
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                    [GenomeBrowser] => Array
                                                                                        (
                                                                                            [class] => GenomeBrowser
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                )

                                                                            [GeneFamilies] => GeneFamiliesComponent Object
                                                                                (
                                                                                    [name] => GeneFamilies
                                                                                    [controller:GeneFamiliesComponent:private] => OrthologsController Object
 *RECURSION*
                                                                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                                                                    [settings] => Array
                                                                                        (
                                                                                        )

                                                                                    [components] => Array
                                                                                        (
                                                                                        )

                                                                                    [_componentMap:protected] => Array
                                                                                        (
                                                                                        )

                                                                                )

                                                                        )

                                                                    [FunctionalAnnotationUtils] => FunctionalAnnotationUtilsComponent Object
                                                                        (
                                                                            [name] => FunctionalAnnotationUtils
                                                                            [controller] => OrthologsController Object
 *RECURSION*
                                                                            [components] => Array
                                                                                (
                                                                                    [0] => FunctionalUtils
                                                                                )

                                                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                                                            [settings] => Array
                                                                                (
                                                                                )

                                                                            [_componentMap:protected] => Array
                                                                                (
                                                                                    [FunctionalUtils] => Array
                                                                                        (
                                                                                            [class] => FunctionalUtils
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                )

                                                                        )

                                                                    [GeneFamilies] => GeneFamiliesComponent Object
                                                                        (
                                                                            [name] => GeneFamilies
                                                                            [controller:GeneFamiliesComponent:private] => OrthologsController Object
 *RECURSION*
                                                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                                                            [settings] => Array
                                                                                (
                                                                                )

                                                                            [components] => Array
                                                                                (
                                                                                )

                                                                            [_componentMap:protected] => Array
                                                                                (
                                                                                )

                                                                        )

                                                                    [Organism] => OrganismComponent Object
                                                                        (
                                                                            [name] => Organism
                                                                            [controller:OrganismComponent:private] => OrthologsController Object
 *RECURSION*
                                                                            [components] => Array
                                                                                (
                                                                                    [0] => GenomeBrowser
                                                                                )

                                                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                                                            [settings] => Array
                                                                                (
                                                                                )

                                                                            [_componentMap:protected] => Array
                                                                                (
                                                                                    [GenomeBrowser] => Array
                                                                                        (
                                                                                            [class] => GenomeBrowser
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                )

                                                                        )

                                                                    [Blast] => BlastComponent Object
                                                                        (
                                                                            [name] => Blast
                                                                            [controller] => OrthologsController Object
 *RECURSION*
                                                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                                                            [settings] => Array
                                                                                (
                                                                                )

                                                                            [components] => Array
                                                                                (
                                                                                )

                                                                            [_componentMap:protected] => Array
                                                                                (
                                                                                )

                                                                        )

                                                                    [WorkbenchUtils] => WorkbenchUtilsComponent Object
                                                                        (
                                                                            [name] => WorkbenchUtils
                                                                            [controller:WorkbenchUtilsComponent:private] => OrthologsController Object
 *RECURSION*
                                                                            [components] => Array
                                                                                (
                                                                                    [0] => ExternalPrograms
                                                                                    [1] => FormUtils
                                                                                    [2] => FunctionalUtils
                                                                                    [3] => GeneFamilies
                                                                                    [4] => WorkbenchSharedAccessRights
                                                                                )

                                                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                                                            [settings] => Array
                                                                                (
                                                                                )

                                                                            [_componentMap:protected] => Array
                                                                                (
                                                                                    [ExternalPrograms] => Array
                                                                                        (
                                                                                            [class] => ExternalPrograms
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                    [FormUtils] => Array
                                                                                        (
                                                                                            [class] => FormUtils
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                    [FunctionalUtils] => Array
                                                                                        (
                                                                                            [class] => FunctionalUtils
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                    [GeneFamilies] => Array
                                                                                        (
                                                                                            [class] => GeneFamilies
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                    [WorkbenchSharedAccessRights] => Array
                                                                                        (
                                                                                            [class] => WorkbenchSharedAccessRights
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                )

                                                                        )

                                                                    [Orthology] => OrthologyComponent Object
                                                                        (
                                                                            [name] => Orthology
                                                                            [controller:OrthologyComponent:private] => OrthologsController Object
 *RECURSION*
                                                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                                                            [settings] => Array
                                                                                (
                                                                                )

                                                                            [components] => Array
                                                                                (
                                                                                )

                                                                            [_componentMap:protected] => Array
                                                                                (
                                                                                )

                                                                        )

                                                                )

                                                            [defaultPriority] => 10
                                                        )

                                                    [1] => trigger
                                                )

                                            [passParams] => 
                                        )

                                    [1] => Array
                                        (
                                            [callable] => Array
                                                (
                                                    [0] => OrthologsController Object
 *RECURSION*
                                                    [1] => beforeRedirect
                                                )

                                            [passParams] => 1
                                        )

                                )

                        )

                    [Controller.shutdown] => Array
                        (
                            [10] => Array
                                (
                                    [0] => Array
                                        (
                                            [callable] => Array
                                                (
                                                    [0] => ComponentCollection Object
                                                        (
                                                            [_Controller:protected] => OrthologsController Object
 *RECURSION*
                                                            [_enabled:protected] => Array
                                                                (
                                                                    [Session] => Array
                                                                        (
                                                                            [0] => 10
                                                                            [1] => 1
                                                                        )

                                                                    [DataUtils] => Array
                                                                        (
                                                                            [0] => 10
                                                                            [1] => 2
                                                                        )

                                                                    [FunctionalAnnotationUtils] => Array
                                                                        (
                                                                            [0] => 10
                                                                            [1] => 3
                                                                        )

                                                                    [GeneFamilies] => Array
                                                                        (
                                                                            [0] => 10
                                                                            [1] => 4
                                                                        )

                                                                    [Organism] => Array
                                                                        (
                                                                            [0] => 10
                                                                            [1] => 5
                                                                        )

                                                                    [Blast] => Array
                                                                        (
                                                                            [0] => 10
                                                                            [1] => 6
                                                                        )

                                                                    [WorkbenchUtils] => Array
                                                                        (
                                                                            [0] => 10
                                                                            [1] => 7
                                                                        )

                                                                    [Orthology] => Array
                                                                        (
                                                                            [0] => 10
                                                                            [1] => 8
                                                                        )

                                                                )

                                                            [_loaded:protected] => Array
                                                                (
                                                                    [Session] => SessionComponent Object
                                                                        (
                                                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                                                            [settings] => Array
                                                                                (
                                                                                )

                                                                            [components] => Array
                                                                                (
                                                                                )

                                                                            [_componentMap:protected] => Array
                                                                                (
                                                                                )

                                                                        )

                                                                    [DataUtils] => DataUtilsComponent Object
                                                                        (
                                                                            [name] => DataUtils
                                                                            [controller] => OrthologsController Object
 *RECURSION*
                                                                            [components] => Array
                                                                                (
                                                                                    [0] => ExternalPrograms
                                                                                    [1] => FunctionalUtils
                                                                                    [2] => GeneFamilies
                                                                                    [3] => GenomeBrowser
                                                                                )

                                                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                                                            [settings] => Array
                                                                                (
                                                                                )

                                                                            [_componentMap:protected] => Array
                                                                                (
                                                                                    [ExternalPrograms] => Array
                                                                                        (
                                                                                            [class] => ExternalPrograms
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                    [FunctionalUtils] => Array
                                                                                        (
                                                                                            [class] => FunctionalUtils
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                    [GeneFamilies] => Array
                                                                                        (
                                                                                            [class] => GeneFamilies
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                    [GenomeBrowser] => Array
                                                                                        (
                                                                                            [class] => GenomeBrowser
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                )

                                                                            [GeneFamilies] => GeneFamiliesComponent Object
                                                                                (
                                                                                    [name] => GeneFamilies
                                                                                    [controller:GeneFamiliesComponent:private] => OrthologsController Object
 *RECURSION*
                                                                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                                                                    [settings] => Array
                                                                                        (
                                                                                        )

                                                                                    [components] => Array
                                                                                        (
                                                                                        )

                                                                                    [_componentMap:protected] => Array
                                                                                        (
                                                                                        )

                                                                                )

                                                                        )

                                                                    [FunctionalAnnotationUtils] => FunctionalAnnotationUtilsComponent Object
                                                                        (
                                                                            [name] => FunctionalAnnotationUtils
                                                                            [controller] => OrthologsController Object
 *RECURSION*
                                                                            [components] => Array
                                                                                (
                                                                                    [0] => FunctionalUtils
                                                                                )

                                                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                                                            [settings] => Array
                                                                                (
                                                                                )

                                                                            [_componentMap:protected] => Array
                                                                                (
                                                                                    [FunctionalUtils] => Array
                                                                                        (
                                                                                            [class] => FunctionalUtils
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                )

                                                                        )

                                                                    [GeneFamilies] => GeneFamiliesComponent Object
                                                                        (
                                                                            [name] => GeneFamilies
                                                                            [controller:GeneFamiliesComponent:private] => OrthologsController Object
 *RECURSION*
                                                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                                                            [settings] => Array
                                                                                (
                                                                                )

                                                                            [components] => Array
                                                                                (
                                                                                )

                                                                            [_componentMap:protected] => Array
                                                                                (
                                                                                )

                                                                        )

                                                                    [Organism] => OrganismComponent Object
                                                                        (
                                                                            [name] => Organism
                                                                            [controller:OrganismComponent:private] => OrthologsController Object
 *RECURSION*
                                                                            [components] => Array
                                                                                (
                                                                                    [0] => GenomeBrowser
                                                                                )

                                                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                                                            [settings] => Array
                                                                                (
                                                                                )

                                                                            [_componentMap:protected] => Array
                                                                                (
                                                                                    [GenomeBrowser] => Array
                                                                                        (
                                                                                            [class] => GenomeBrowser
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                )

                                                                        )

                                                                    [Blast] => BlastComponent Object
                                                                        (
                                                                            [name] => Blast
                                                                            [controller] => OrthologsController Object
 *RECURSION*
                                                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                                                            [settings] => Array
                                                                                (
                                                                                )

                                                                            [components] => Array
                                                                                (
                                                                                )

                                                                            [_componentMap:protected] => Array
                                                                                (
                                                                                )

                                                                        )

                                                                    [WorkbenchUtils] => WorkbenchUtilsComponent Object
                                                                        (
                                                                            [name] => WorkbenchUtils
                                                                            [controller:WorkbenchUtilsComponent:private] => OrthologsController Object
 *RECURSION*
                                                                            [components] => Array
                                                                                (
                                                                                    [0] => ExternalPrograms
                                                                                    [1] => FormUtils
                                                                                    [2] => FunctionalUtils
                                                                                    [3] => GeneFamilies
                                                                                    [4] => WorkbenchSharedAccessRights
                                                                                )

                                                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                                                            [settings] => Array
                                                                                (
                                                                                )

                                                                            [_componentMap:protected] => Array
                                                                                (
                                                                                    [ExternalPrograms] => Array
                                                                                        (
                                                                                            [class] => ExternalPrograms
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                    [FormUtils] => Array
                                                                                        (
                                                                                            [class] => FormUtils
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                    [FunctionalUtils] => Array
                                                                                        (
                                                                                            [class] => FunctionalUtils
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                    [GeneFamilies] => Array
                                                                                        (
                                                                                            [class] => GeneFamilies
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                    [WorkbenchSharedAccessRights] => Array
                                                                                        (
                                                                                            [class] => WorkbenchSharedAccessRights
                                                                                            [settings] => Array
                                                                                                (
                                                                                                )

                                                                                        )

                                                                                )

                                                                        )

                                                                    [Orthology] => OrthologyComponent Object
                                                                        (
                                                                            [name] => Orthology
                                                                            [controller:OrthologyComponent:private] => OrthologsController Object
 *RECURSION*
                                                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                                                            [settings] => Array
                                                                                (
                                                                                )

                                                                            [components] => Array
                                                                                (
                                                                                )

                                                                            [_componentMap:protected] => Array
                                                                                (
                                                                                )

                                                                        )

                                                                )

                                                            [defaultPriority] => 10
                                                        )

                                                    [1] => trigger
                                                )

                                            [passParams] => 
                                        )

                                    [1] => Array
                                        (
                                            [callable] => Array
                                                (
                                                    [0] => OrthologsController Object
 *RECURSION*
                                                    [1] => afterFilter
                                                )

                                            [passParams] => 
                                        )

                                )

                        )

                )

            [_isGlobal:protected] => 
        )

    [Session] => SessionComponent Object
        (
            [_Collection:protected] => ComponentCollection Object
                (
                    [_Controller:protected] => OrthologsController Object
 *RECURSION*
                    [_enabled:protected] => Array
                        (
                            [Session] => Array
                                (
                                    [0] => 10
                                    [1] => 1
                                )

                            [DataUtils] => Array
                                (
                                    [0] => 10
                                    [1] => 2
                                )

                            [FunctionalAnnotationUtils] => Array
                                (
                                    [0] => 10
                                    [1] => 3
                                )

                            [GeneFamilies] => Array
                                (
                                    [0] => 10
                                    [1] => 4
                                )

                            [Organism] => Array
                                (
                                    [0] => 10
                                    [1] => 5
                                )

                            [Blast] => Array
                                (
                                    [0] => 10
                                    [1] => 6
                                )

                            [WorkbenchUtils] => Array
                                (
                                    [0] => 10
                                    [1] => 7
                                )

                            [Orthology] => Array
                                (
                                    [0] => 10
                                    [1] => 8
                                )

                        )

                    [_loaded:protected] => Array
                        (
                            [Session] => SessionComponent Object
 *RECURSION*
                            [DataUtils] => DataUtilsComponent Object
                                (
                                    [name] => DataUtils
                                    [controller] => OrthologsController Object
 *RECURSION*
                                    [components] => Array
                                        (
                                            [0] => ExternalPrograms
                                            [1] => FunctionalUtils
                                            [2] => GeneFamilies
                                            [3] => GenomeBrowser
                                        )

                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                            [ExternalPrograms] => Array
                                                (
                                                    [class] => ExternalPrograms
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                            [FunctionalUtils] => Array
                                                (
                                                    [class] => FunctionalUtils
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                            [GeneFamilies] => Array
                                                (
                                                    [class] => GeneFamilies
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                            [GenomeBrowser] => Array
                                                (
                                                    [class] => GenomeBrowser
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                        )

                                    [GeneFamilies] => GeneFamiliesComponent Object
                                        (
                                            [name] => GeneFamilies
                                            [controller:GeneFamiliesComponent:private] => OrthologsController Object
 *RECURSION*
                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                            [settings] => Array
                                                (
                                                )

                                            [components] => Array
                                                (
                                                )

                                            [_componentMap:protected] => Array
                                                (
                                                )

                                        )

                                )

                            [FunctionalAnnotationUtils] => FunctionalAnnotationUtilsComponent Object
                                (
                                    [name] => FunctionalAnnotationUtils
                                    [controller] => OrthologsController Object
 *RECURSION*
                                    [components] => Array
                                        (
                                            [0] => FunctionalUtils
                                        )

                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                            [FunctionalUtils] => Array
                                                (
                                                    [class] => FunctionalUtils
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                        )

                                )

                            [GeneFamilies] => GeneFamiliesComponent Object
                                (
                                    [name] => GeneFamilies
                                    [controller:GeneFamiliesComponent:private] => OrthologsController Object
 *RECURSION*
                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [components] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                        )

                                )

                            [Organism] => OrganismComponent Object
                                (
                                    [name] => Organism
                                    [controller:OrganismComponent:private] => OrthologsController Object
 *RECURSION*
                                    [components] => Array
                                        (
                                            [0] => GenomeBrowser
                                        )

                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                            [GenomeBrowser] => Array
                                                (
                                                    [class] => GenomeBrowser
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                        )

                                )

                            [Blast] => BlastComponent Object
                                (
                                    [name] => Blast
                                    [controller] => OrthologsController Object
 *RECURSION*
                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [components] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                        )

                                )

                            [WorkbenchUtils] => WorkbenchUtilsComponent Object
                                (
                                    [name] => WorkbenchUtils
                                    [controller:WorkbenchUtilsComponent:private] => OrthologsController Object
 *RECURSION*
                                    [components] => Array
                                        (
                                            [0] => ExternalPrograms
                                            [1] => FormUtils
                                            [2] => FunctionalUtils
                                            [3] => GeneFamilies
                                            [4] => WorkbenchSharedAccessRights
                                        )

                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                            [ExternalPrograms] => Array
                                                (
                                                    [class] => ExternalPrograms
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                            [FormUtils] => Array
                                                (
                                                    [class] => FormUtils
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                            [FunctionalUtils] => Array
                                                (
                                                    [class] => FunctionalUtils
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                            [GeneFamilies] => Array
                                                (
                                                    [class] => GeneFamilies
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                            [WorkbenchSharedAccessRights] => Array
                                                (
                                                    [class] => WorkbenchSharedAccessRights
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                        )

                                )

                            [Orthology] => OrthologyComponent Object
                                (
                                    [name] => Orthology
                                    [controller:OrthologyComponent:private] => OrthologsController Object
 *RECURSION*
                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [components] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                        )

                                )

                        )

                    [defaultPriority] => 10
                )

            [settings] => Array
                (
                )

            [components] => Array
                (
                )

            [_componentMap:protected] => Array
                (
                )

        )

    [DataUtils] => DataUtilsComponent Object
        (
            [name] => DataUtils
            [controller] => OrthologsController Object
 *RECURSION*
            [components] => Array
                (
                    [0] => ExternalPrograms
                    [1] => FunctionalUtils
                    [2] => GeneFamilies
                    [3] => GenomeBrowser
                )

            [_Collection:protected] => ComponentCollection Object
                (
                    [_Controller:protected] => OrthologsController Object
 *RECURSION*
                    [_enabled:protected] => Array
                        (
                            [Session] => Array
                                (
                                    [0] => 10
                                    [1] => 1
                                )

                            [DataUtils] => Array
                                (
                                    [0] => 10
                                    [1] => 2
                                )

                            [FunctionalAnnotationUtils] => Array
                                (
                                    [0] => 10
                                    [1] => 3
                                )

                            [GeneFamilies] => Array
                                (
                                    [0] => 10
                                    [1] => 4
                                )

                            [Organism] => Array
                                (
                                    [0] => 10
                                    [1] => 5
                                )

                            [Blast] => Array
                                (
                                    [0] => 10
                                    [1] => 6
                                )

                            [WorkbenchUtils] => Array
                                (
                                    [0] => 10
                                    [1] => 7
                                )

                            [Orthology] => Array
                                (
                                    [0] => 10
                                    [1] => 8
                                )

                        )

                    [_loaded:protected] => Array
                        (
                            [Session] => SessionComponent Object
                                (
                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [components] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                        )

                                )

                            [DataUtils] => DataUtilsComponent Object
 *RECURSION*
                            [FunctionalAnnotationUtils] => FunctionalAnnotationUtilsComponent Object
                                (
                                    [name] => FunctionalAnnotationUtils
                                    [controller] => OrthologsController Object
 *RECURSION*
                                    [components] => Array
                                        (
                                            [0] => FunctionalUtils
                                        )

                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                            [FunctionalUtils] => Array
                                                (
                                                    [class] => FunctionalUtils
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                        )

                                )

                            [GeneFamilies] => GeneFamiliesComponent Object
                                (
                                    [name] => GeneFamilies
                                    [controller:GeneFamiliesComponent:private] => OrthologsController Object
 *RECURSION*
                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [components] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                        )

                                )

                            [Organism] => OrganismComponent Object
                                (
                                    [name] => Organism
                                    [controller:OrganismComponent:private] => OrthologsController Object
 *RECURSION*
                                    [components] => Array
                                        (
                                            [0] => GenomeBrowser
                                        )

                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                            [GenomeBrowser] => Array
                                                (
                                                    [class] => GenomeBrowser
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                        )

                                )

                            [Blast] => BlastComponent Object
                                (
                                    [name] => Blast
                                    [controller] => OrthologsController Object
 *RECURSION*
                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [components] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                        )

                                )

                            [WorkbenchUtils] => WorkbenchUtilsComponent Object
                                (
                                    [name] => WorkbenchUtils
                                    [controller:WorkbenchUtilsComponent:private] => OrthologsController Object
 *RECURSION*
                                    [components] => Array
                                        (
                                            [0] => ExternalPrograms
                                            [1] => FormUtils
                                            [2] => FunctionalUtils
                                            [3] => GeneFamilies
                                            [4] => WorkbenchSharedAccessRights
                                        )

                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                            [ExternalPrograms] => Array
                                                (
                                                    [class] => ExternalPrograms
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                            [FormUtils] => Array
                                                (
                                                    [class] => FormUtils
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                            [FunctionalUtils] => Array
                                                (
                                                    [class] => FunctionalUtils
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                            [GeneFamilies] => Array
                                                (
                                                    [class] => GeneFamilies
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                            [WorkbenchSharedAccessRights] => Array
                                                (
                                                    [class] => WorkbenchSharedAccessRights
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                        )

                                )

                            [Orthology] => OrthologyComponent Object
                                (
                                    [name] => Orthology
                                    [controller:OrthologyComponent:private] => OrthologsController Object
 *RECURSION*
                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [components] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                        )

                                )

                        )

                    [defaultPriority] => 10
                )

            [settings] => Array
                (
                )

            [_componentMap:protected] => Array
                (
                    [ExternalPrograms] => Array
                        (
                            [class] => ExternalPrograms
                            [settings] => Array
                                (
                                )

                        )

                    [FunctionalUtils] => Array
                        (
                            [class] => FunctionalUtils
                            [settings] => Array
                                (
                                )

                        )

                    [GeneFamilies] => Array
                        (
                            [class] => GeneFamilies
                            [settings] => Array
                                (
                                )

                        )

                    [GenomeBrowser] => Array
                        (
                            [class] => GenomeBrowser
                            [settings] => Array
                                (
                                )

                        )

                )

            [GeneFamilies] => GeneFamiliesComponent Object
                (
                    [name] => GeneFamilies
                    [controller:GeneFamiliesComponent:private] => OrthologsController Object
 *RECURSION*
                    [_Collection:protected] => ComponentCollection Object
                        (
                            [_Controller:protected] => OrthologsController Object
 *RECURSION*
                            [_enabled:protected] => Array
                                (
                                    [Session] => Array
                                        (
                                            [0] => 10
                                            [1] => 1
                                        )

                                    [DataUtils] => Array
                                        (
                                            [0] => 10
                                            [1] => 2
                                        )

                                    [FunctionalAnnotationUtils] => Array
                                        (
                                            [0] => 10
                                            [1] => 3
                                        )

                                    [GeneFamilies] => Array
                                        (
                                            [0] => 10
                                            [1] => 4
                                        )

                                    [Organism] => Array
                                        (
                                            [0] => 10
                                            [1] => 5
                                        )

                                    [Blast] => Array
                                        (
                                            [0] => 10
                                            [1] => 6
                                        )

                                    [WorkbenchUtils] => Array
                                        (
                                            [0] => 10
                                            [1] => 7
                                        )

                                    [Orthology] => Array
                                        (
                                            [0] => 10
                                            [1] => 8
                                        )

                                )

                            [_loaded:protected] => Array
                                (
                                    [Session] => SessionComponent Object
                                        (
                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                            [settings] => Array
                                                (
                                                )

                                            [components] => Array
                                                (
                                                )

                                            [_componentMap:protected] => Array
                                                (
                                                )

                                        )

                                    [DataUtils] => DataUtilsComponent Object
 *RECURSION*
                                    [FunctionalAnnotationUtils] => FunctionalAnnotationUtilsComponent Object
                                        (
                                            [name] => FunctionalAnnotationUtils
                                            [controller] => OrthologsController Object
 *RECURSION*
                                            [components] => Array
                                                (
                                                    [0] => FunctionalUtils
                                                )

                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                            [settings] => Array
                                                (
                                                )

                                            [_componentMap:protected] => Array
                                                (
                                                    [FunctionalUtils] => Array
                                                        (
                                                            [class] => FunctionalUtils
                                                            [settings] => Array
                                                                (
                                                                )

                                                        )

                                                )

                                        )

                                    [GeneFamilies] => GeneFamiliesComponent Object
 *RECURSION*
                                    [Organism] => OrganismComponent Object
                                        (
                                            [name] => Organism
                                            [controller:OrganismComponent:private] => OrthologsController Object
 *RECURSION*
                                            [components] => Array
                                                (
                                                    [0] => GenomeBrowser
                                                )

                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                            [settings] => Array
                                                (
                                                )

                                            [_componentMap:protected] => Array
                                                (
                                                    [GenomeBrowser] => Array
                                                        (
                                                            [class] => GenomeBrowser
                                                            [settings] => Array
                                                                (
                                                                )

                                                        )

                                                )

                                        )

                                    [Blast] => BlastComponent Object
                                        (
                                            [name] => Blast
                                            [controller] => OrthologsController Object
 *RECURSION*
                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                            [settings] => Array
                                                (
                                                )

                                            [components] => Array
                                                (
                                                )

                                            [_componentMap:protected] => Array
                                                (
                                                )

                                        )

                                    [WorkbenchUtils] => WorkbenchUtilsComponent Object
                                        (
                                            [name] => WorkbenchUtils
                                            [controller:WorkbenchUtilsComponent:private] => OrthologsController Object
 *RECURSION*
                                            [components] => Array
                                                (
                                                    [0] => ExternalPrograms
                                                    [1] => FormUtils
                                                    [2] => FunctionalUtils
                                                    [3] => GeneFamilies
                                                    [4] => WorkbenchSharedAccessRights
                                                )

                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                            [settings] => Array
                                                (
                                                )

                                            [_componentMap:protected] => Array
                                                (
                                                    [ExternalPrograms] => Array
                                                        (
                                                            [class] => ExternalPrograms
                                                            [settings] => Array
                                                                (
                                                                )

                                                        )

                                                    [FormUtils] => Array
                                                        (
                                                            [class] => FormUtils
                                                            [settings] => Array
                                                                (
                                                                )

                                                        )

                                                    [FunctionalUtils] => Array
                                                        (
                                                            [class] => FunctionalUtils
                                                            [settings] => Array
                                                                (
                                                                )

                                                        )

                                                    [GeneFamilies] => Array
                                                        (
                                                            [class] => GeneFamilies
                                                            [settings] => Array
                                                                (
                                                                )

                                                        )

                                                    [WorkbenchSharedAccessRights] => Array
                                                        (
                                                            [class] => WorkbenchSharedAccessRights
                                                            [settings] => Array
                                                                (
                                                                )

                                                        )

                                                )

                                        )

                                    [Orthology] => OrthologyComponent Object
                                        (
                                            [name] => Orthology
                                            [controller:OrthologyComponent:private] => OrthologsController Object
 *RECURSION*
                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                            [settings] => Array
                                                (
                                                )

                                            [components] => Array
                                                (
                                                )

                                            [_componentMap:protected] => Array
                                                (
                                                )

                                        )

                                )

                            [defaultPriority] => 10
                        )

                    [settings] => Array
                        (
                        )

                    [components] => Array
                        (
                        )

                    [_componentMap:protected] => Array
                        (
                        )

                )

        )

    [FunctionalAnnotationUtils] => FunctionalAnnotationUtilsComponent Object
        (
            [name] => FunctionalAnnotationUtils
            [controller] => OrthologsController Object
 *RECURSION*
            [components] => Array
                (
                    [0] => FunctionalUtils
                )

            [_Collection:protected] => ComponentCollection Object
                (
                    [_Controller:protected] => OrthologsController Object
 *RECURSION*
                    [_enabled:protected] => Array
                        (
                            [Session] => Array
                                (
                                    [0] => 10
                                    [1] => 1
                                )

                            [DataUtils] => Array
                                (
                                    [0] => 10
                                    [1] => 2
                                )

                            [FunctionalAnnotationUtils] => Array
                                (
                                    [0] => 10
                                    [1] => 3
                                )

                            [GeneFamilies] => Array
                                (
                                    [0] => 10
                                    [1] => 4
                                )

                            [Organism] => Array
                                (
                                    [0] => 10
                                    [1] => 5
                                )

                            [Blast] => Array
                                (
                                    [0] => 10
                                    [1] => 6
                                )

                            [WorkbenchUtils] => Array
                                (
                                    [0] => 10
                                    [1] => 7
                                )

                            [Orthology] => Array
                                (
                                    [0] => 10
                                    [1] => 8
                                )

                        )

                    [_loaded:protected] => Array
                        (
                            [Session] => SessionComponent Object
                                (
                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [components] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                        )

                                )

                            [DataUtils] => DataUtilsComponent Object
                                (
                                    [name] => DataUtils
                                    [controller] => OrthologsController Object
 *RECURSION*
                                    [components] => Array
                                        (
                                            [0] => ExternalPrograms
                                            [1] => FunctionalUtils
                                            [2] => GeneFamilies
                                            [3] => GenomeBrowser
                                        )

                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                            [ExternalPrograms] => Array
                                                (
                                                    [class] => ExternalPrograms
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                            [FunctionalUtils] => Array
                                                (
                                                    [class] => FunctionalUtils
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                            [GeneFamilies] => Array
                                                (
                                                    [class] => GeneFamilies
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                            [GenomeBrowser] => Array
                                                (
                                                    [class] => GenomeBrowser
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                        )

                                    [GeneFamilies] => GeneFamiliesComponent Object
                                        (
                                            [name] => GeneFamilies
                                            [controller:GeneFamiliesComponent:private] => OrthologsController Object
 *RECURSION*
                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                            [settings] => Array
                                                (
                                                )

                                            [components] => Array
                                                (
                                                )

                                            [_componentMap:protected] => Array
                                                (
                                                )

                                        )

                                )

                            [FunctionalAnnotationUtils] => FunctionalAnnotationUtilsComponent Object
 *RECURSION*
                            [GeneFamilies] => GeneFamiliesComponent Object
                                (
                                    [name] => GeneFamilies
                                    [controller:GeneFamiliesComponent:private] => OrthologsController Object
 *RECURSION*
                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [components] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                        )

                                )

                            [Organism] => OrganismComponent Object
                                (
                                    [name] => Organism
                                    [controller:OrganismComponent:private] => OrthologsController Object
 *RECURSION*
                                    [components] => Array
                                        (
                                            [0] => GenomeBrowser
                                        )

                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                            [GenomeBrowser] => Array
                                                (
                                                    [class] => GenomeBrowser
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                        )

                                )

                            [Blast] => BlastComponent Object
                                (
                                    [name] => Blast
                                    [controller] => OrthologsController Object
 *RECURSION*
                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [components] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                        )

                                )

                            [WorkbenchUtils] => WorkbenchUtilsComponent Object
                                (
                                    [name] => WorkbenchUtils
                                    [controller:WorkbenchUtilsComponent:private] => OrthologsController Object
 *RECURSION*
                                    [components] => Array
                                        (
                                            [0] => ExternalPrograms
                                            [1] => FormUtils
                                            [2] => FunctionalUtils
                                            [3] => GeneFamilies
                                            [4] => WorkbenchSharedAccessRights
                                        )

                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                            [ExternalPrograms] => Array
                                                (
                                                    [class] => ExternalPrograms
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                            [FormUtils] => Array
                                                (
                                                    [class] => FormUtils
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                            [FunctionalUtils] => Array
                                                (
                                                    [class] => FunctionalUtils
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                            [GeneFamilies] => Array
                                                (
                                                    [class] => GeneFamilies
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                            [WorkbenchSharedAccessRights] => Array
                                                (
                                                    [class] => WorkbenchSharedAccessRights
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                        )

                                )

                            [Orthology] => OrthologyComponent Object
                                (
                                    [name] => Orthology
                                    [controller:OrthologyComponent:private] => OrthologsController Object
 *RECURSION*
                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [components] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                        )

                                )

                        )

                    [defaultPriority] => 10
                )

            [settings] => Array
                (
                )

            [_componentMap:protected] => Array
                (
                    [FunctionalUtils] => Array
                        (
                            [class] => FunctionalUtils
                            [settings] => Array
                                (
                                )

                        )

                )

        )

    [GeneFamilies] => GeneFamiliesComponent Object
        (
            [name] => GeneFamilies
            [controller:GeneFamiliesComponent:private] => OrthologsController Object
 *RECURSION*
            [_Collection:protected] => ComponentCollection Object
                (
                    [_Controller:protected] => OrthologsController Object
 *RECURSION*
                    [_enabled:protected] => Array
                        (
                            [Session] => Array
                                (
                                    [0] => 10
                                    [1] => 1
                                )

                            [DataUtils] => Array
                                (
                                    [0] => 10
                                    [1] => 2
                                )

                            [FunctionalAnnotationUtils] => Array
                                (
                                    [0] => 10
                                    [1] => 3
                                )

                            [GeneFamilies] => Array
                                (
                                    [0] => 10
                                    [1] => 4
                                )

                            [Organism] => Array
                                (
                                    [0] => 10
                                    [1] => 5
                                )

                            [Blast] => Array
                                (
                                    [0] => 10
                                    [1] => 6
                                )

                            [WorkbenchUtils] => Array
                                (
                                    [0] => 10
                                    [1] => 7
                                )

                            [Orthology] => Array
                                (
                                    [0] => 10
                                    [1] => 8
                                )

                        )

                    [_loaded:protected] => Array
                        (
                            [Session] => SessionComponent Object
                                (
                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [components] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                        )

                                )

                            [DataUtils] => DataUtilsComponent Object
                                (
                                    [name] => DataUtils
                                    [controller] => OrthologsController Object
 *RECURSION*
                                    [components] => Array
                                        (
                                            [0] => ExternalPrograms
                                            [1] => FunctionalUtils
                                            [2] => GeneFamilies
                                            [3] => GenomeBrowser
                                        )

                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                            [ExternalPrograms] => Array
                                                (
                                                    [class] => ExternalPrograms
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                            [FunctionalUtils] => Array
                                                (
                                                    [class] => FunctionalUtils
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                            [GeneFamilies] => Array
                                                (
                                                    [class] => GeneFamilies
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                            [GenomeBrowser] => Array
                                                (
                                                    [class] => GenomeBrowser
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                        )

                                    [GeneFamilies] => GeneFamiliesComponent Object
 *RECURSION*
                                )

                            [FunctionalAnnotationUtils] => FunctionalAnnotationUtilsComponent Object
                                (
                                    [name] => FunctionalAnnotationUtils
                                    [controller] => OrthologsController Object
 *RECURSION*
                                    [components] => Array
                                        (
                                            [0] => FunctionalUtils
                                        )

                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                            [FunctionalUtils] => Array
                                                (
                                                    [class] => FunctionalUtils
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                        )

                                )

                            [GeneFamilies] => GeneFamiliesComponent Object
 *RECURSION*
                            [Organism] => OrganismComponent Object
                                (
                                    [name] => Organism
                                    [controller:OrganismComponent:private] => OrthologsController Object
 *RECURSION*
                                    [components] => Array
                                        (
                                            [0] => GenomeBrowser
                                        )

                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                            [GenomeBrowser] => Array
                                                (
                                                    [class] => GenomeBrowser
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                        )

                                )

                            [Blast] => BlastComponent Object
                                (
                                    [name] => Blast
                                    [controller] => OrthologsController Object
 *RECURSION*
                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [components] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                        )

                                )

                            [WorkbenchUtils] => WorkbenchUtilsComponent Object
                                (
                                    [name] => WorkbenchUtils
                                    [controller:WorkbenchUtilsComponent:private] => OrthologsController Object
 *RECURSION*
                                    [components] => Array
                                        (
                                            [0] => ExternalPrograms
                                            [1] => FormUtils
                                            [2] => FunctionalUtils
                                            [3] => GeneFamilies
                                            [4] => WorkbenchSharedAccessRights
                                        )

                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                            [ExternalPrograms] => Array
                                                (
                                                    [class] => ExternalPrograms
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                            [FormUtils] => Array
                                                (
                                                    [class] => FormUtils
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                            [FunctionalUtils] => Array
                                                (
                                                    [class] => FunctionalUtils
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                            [GeneFamilies] => Array
                                                (
                                                    [class] => GeneFamilies
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                            [WorkbenchSharedAccessRights] => Array
                                                (
                                                    [class] => WorkbenchSharedAccessRights
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                        )

                                )

                            [Orthology] => OrthologyComponent Object
                                (
                                    [name] => Orthology
                                    [controller:OrthologyComponent:private] => OrthologsController Object
 *RECURSION*
                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [components] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                        )

                                )

                        )

                    [defaultPriority] => 10
                )

            [settings] => Array
                (
                )

            [components] => Array
                (
                )

            [_componentMap:protected] => Array
                (
                )

        )

    [Organism] => OrganismComponent Object
        (
            [name] => Organism
            [controller:OrganismComponent:private] => OrthologsController Object
 *RECURSION*
            [components] => Array
                (
                    [0] => GenomeBrowser
                )

            [_Collection:protected] => ComponentCollection Object
                (
                    [_Controller:protected] => OrthologsController Object
 *RECURSION*
                    [_enabled:protected] => Array
                        (
                            [Session] => Array
                                (
                                    [0] => 10
                                    [1] => 1
                                )

                            [DataUtils] => Array
                                (
                                    [0] => 10
                                    [1] => 2
                                )

                            [FunctionalAnnotationUtils] => Array
                                (
                                    [0] => 10
                                    [1] => 3
                                )

                            [GeneFamilies] => Array
                                (
                                    [0] => 10
                                    [1] => 4
                                )

                            [Organism] => Array
                                (
                                    [0] => 10
                                    [1] => 5
                                )

                            [Blast] => Array
                                (
                                    [0] => 10
                                    [1] => 6
                                )

                            [WorkbenchUtils] => Array
                                (
                                    [0] => 10
                                    [1] => 7
                                )

                            [Orthology] => Array
                                (
                                    [0] => 10
                                    [1] => 8
                                )

                        )

                    [_loaded:protected] => Array
                        (
                            [Session] => SessionComponent Object
                                (
                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [components] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                        )

                                )

                            [DataUtils] => DataUtilsComponent Object
                                (
                                    [name] => DataUtils
                                    [controller] => OrthologsController Object
 *RECURSION*
                                    [components] => Array
                                        (
                                            [0] => ExternalPrograms
                                            [1] => FunctionalUtils
                                            [2] => GeneFamilies
                                            [3] => GenomeBrowser
                                        )

                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                            [ExternalPrograms] => Array
                                                (
                                                    [class] => ExternalPrograms
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                            [FunctionalUtils] => Array
                                                (
                                                    [class] => FunctionalUtils
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                            [GeneFamilies] => Array
                                                (
                                                    [class] => GeneFamilies
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                            [GenomeBrowser] => Array
                                                (
                                                    [class] => GenomeBrowser
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                        )

                                    [GeneFamilies] => GeneFamiliesComponent Object
                                        (
                                            [name] => GeneFamilies
                                            [controller:GeneFamiliesComponent:private] => OrthologsController Object
 *RECURSION*
                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                            [settings] => Array
                                                (
                                                )

                                            [components] => Array
                                                (
                                                )

                                            [_componentMap:protected] => Array
                                                (
                                                )

                                        )

                                )

                            [FunctionalAnnotationUtils] => FunctionalAnnotationUtilsComponent Object
                                (
                                    [name] => FunctionalAnnotationUtils
                                    [controller] => OrthologsController Object
 *RECURSION*
                                    [components] => Array
                                        (
                                            [0] => FunctionalUtils
                                        )

                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                            [FunctionalUtils] => Array
                                                (
                                                    [class] => FunctionalUtils
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                        )

                                )

                            [GeneFamilies] => GeneFamiliesComponent Object
                                (
                                    [name] => GeneFamilies
                                    [controller:GeneFamiliesComponent:private] => OrthologsController Object
 *RECURSION*
                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [components] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                        )

                                )

                            [Organism] => OrganismComponent Object
 *RECURSION*
                            [Blast] => BlastComponent Object
                                (
                                    [name] => Blast
                                    [controller] => OrthologsController Object
 *RECURSION*
                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [components] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                        )

                                )

                            [WorkbenchUtils] => WorkbenchUtilsComponent Object
                                (
                                    [name] => WorkbenchUtils
                                    [controller:WorkbenchUtilsComponent:private] => OrthologsController Object
 *RECURSION*
                                    [components] => Array
                                        (
                                            [0] => ExternalPrograms
                                            [1] => FormUtils
                                            [2] => FunctionalUtils
                                            [3] => GeneFamilies
                                            [4] => WorkbenchSharedAccessRights
                                        )

                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                            [ExternalPrograms] => Array
                                                (
                                                    [class] => ExternalPrograms
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                            [FormUtils] => Array
                                                (
                                                    [class] => FormUtils
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                            [FunctionalUtils] => Array
                                                (
                                                    [class] => FunctionalUtils
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                            [GeneFamilies] => Array
                                                (
                                                    [class] => GeneFamilies
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                            [WorkbenchSharedAccessRights] => Array
                                                (
                                                    [class] => WorkbenchSharedAccessRights
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                        )

                                )

                            [Orthology] => OrthologyComponent Object
                                (
                                    [name] => Orthology
                                    [controller:OrthologyComponent:private] => OrthologsController Object
 *RECURSION*
                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [components] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                        )

                                )

                        )

                    [defaultPriority] => 10
                )

            [settings] => Array
                (
                )

            [_componentMap:protected] => Array
                (
                    [GenomeBrowser] => Array
                        (
                            [class] => GenomeBrowser
                            [settings] => Array
                                (
                                )

                        )

                )

        )

    [Blast] => BlastComponent Object
        (
            [name] => Blast
            [controller] => OrthologsController Object
 *RECURSION*
            [_Collection:protected] => ComponentCollection Object
                (
                    [_Controller:protected] => OrthologsController Object
 *RECURSION*
                    [_enabled:protected] => Array
                        (
                            [Session] => Array
                                (
                                    [0] => 10
                                    [1] => 1
                                )

                            [DataUtils] => Array
                                (
                                    [0] => 10
                                    [1] => 2
                                )

                            [FunctionalAnnotationUtils] => Array
                                (
                                    [0] => 10
                                    [1] => 3
                                )

                            [GeneFamilies] => Array
                                (
                                    [0] => 10
                                    [1] => 4
                                )

                            [Organism] => Array
                                (
                                    [0] => 10
                                    [1] => 5
                                )

                            [Blast] => Array
                                (
                                    [0] => 10
                                    [1] => 6
                                )

                            [WorkbenchUtils] => Array
                                (
                                    [0] => 10
                                    [1] => 7
                                )

                            [Orthology] => Array
                                (
                                    [0] => 10
                                    [1] => 8
                                )

                        )

                    [_loaded:protected] => Array
                        (
                            [Session] => SessionComponent Object
                                (
                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [components] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                        )

                                )

                            [DataUtils] => DataUtilsComponent Object
                                (
                                    [name] => DataUtils
                                    [controller] => OrthologsController Object
 *RECURSION*
                                    [components] => Array
                                        (
                                            [0] => ExternalPrograms
                                            [1] => FunctionalUtils
                                            [2] => GeneFamilies
                                            [3] => GenomeBrowser
                                        )

                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                            [ExternalPrograms] => Array
                                                (
                                                    [class] => ExternalPrograms
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                            [FunctionalUtils] => Array
                                                (
                                                    [class] => FunctionalUtils
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                            [GeneFamilies] => Array
                                                (
                                                    [class] => GeneFamilies
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                            [GenomeBrowser] => Array
                                                (
                                                    [class] => GenomeBrowser
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                        )

                                    [GeneFamilies] => GeneFamiliesComponent Object
                                        (
                                            [name] => GeneFamilies
                                            [controller:GeneFamiliesComponent:private] => OrthologsController Object
 *RECURSION*
                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                            [settings] => Array
                                                (
                                                )

                                            [components] => Array
                                                (
                                                )

                                            [_componentMap:protected] => Array
                                                (
                                                )

                                        )

                                )

                            [FunctionalAnnotationUtils] => FunctionalAnnotationUtilsComponent Object
                                (
                                    [name] => FunctionalAnnotationUtils
                                    [controller] => OrthologsController Object
 *RECURSION*
                                    [components] => Array
                                        (
                                            [0] => FunctionalUtils
                                        )

                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                            [FunctionalUtils] => Array
                                                (
                                                    [class] => FunctionalUtils
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                        )

                                )

                            [GeneFamilies] => GeneFamiliesComponent Object
                                (
                                    [name] => GeneFamilies
                                    [controller:GeneFamiliesComponent:private] => OrthologsController Object
 *RECURSION*
                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [components] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                        )

                                )

                            [Organism] => OrganismComponent Object
                                (
                                    [name] => Organism
                                    [controller:OrganismComponent:private] => OrthologsController Object
 *RECURSION*
                                    [components] => Array
                                        (
                                            [0] => GenomeBrowser
                                        )

                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                            [GenomeBrowser] => Array
                                                (
                                                    [class] => GenomeBrowser
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                        )

                                )

                            [Blast] => BlastComponent Object
 *RECURSION*
                            [WorkbenchUtils] => WorkbenchUtilsComponent Object
                                (
                                    [name] => WorkbenchUtils
                                    [controller:WorkbenchUtilsComponent:private] => OrthologsController Object
 *RECURSION*
                                    [components] => Array
                                        (
                                            [0] => ExternalPrograms
                                            [1] => FormUtils
                                            [2] => FunctionalUtils
                                            [3] => GeneFamilies
                                            [4] => WorkbenchSharedAccessRights
                                        )

                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                            [ExternalPrograms] => Array
                                                (
                                                    [class] => ExternalPrograms
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                            [FormUtils] => Array
                                                (
                                                    [class] => FormUtils
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                            [FunctionalUtils] => Array
                                                (
                                                    [class] => FunctionalUtils
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                            [GeneFamilies] => Array
                                                (
                                                    [class] => GeneFamilies
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                            [WorkbenchSharedAccessRights] => Array
                                                (
                                                    [class] => WorkbenchSharedAccessRights
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                        )

                                )

                            [Orthology] => OrthologyComponent Object
                                (
                                    [name] => Orthology
                                    [controller:OrthologyComponent:private] => OrthologsController Object
 *RECURSION*
                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [components] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                        )

                                )

                        )

                    [defaultPriority] => 10
                )

            [settings] => Array
                (
                )

            [components] => Array
                (
                )

            [_componentMap:protected] => Array
                (
                )

        )

    [WorkbenchUtils] => WorkbenchUtilsComponent Object
        (
            [name] => WorkbenchUtils
            [controller:WorkbenchUtilsComponent:private] => OrthologsController Object
 *RECURSION*
            [components] => Array
                (
                    [0] => ExternalPrograms
                    [1] => FormUtils
                    [2] => FunctionalUtils
                    [3] => GeneFamilies
                    [4] => WorkbenchSharedAccessRights
                )

            [_Collection:protected] => ComponentCollection Object
                (
                    [_Controller:protected] => OrthologsController Object
 *RECURSION*
                    [_enabled:protected] => Array
                        (
                            [Session] => Array
                                (
                                    [0] => 10
                                    [1] => 1
                                )

                            [DataUtils] => Array
                                (
                                    [0] => 10
                                    [1] => 2
                                )

                            [FunctionalAnnotationUtils] => Array
                                (
                                    [0] => 10
                                    [1] => 3
                                )

                            [GeneFamilies] => Array
                                (
                                    [0] => 10
                                    [1] => 4
                                )

                            [Organism] => Array
                                (
                                    [0] => 10
                                    [1] => 5
                                )

                            [Blast] => Array
                                (
                                    [0] => 10
                                    [1] => 6
                                )

                            [WorkbenchUtils] => Array
                                (
                                    [0] => 10
                                    [1] => 7
                                )

                            [Orthology] => Array
                                (
                                    [0] => 10
                                    [1] => 8
                                )

                        )

                    [_loaded:protected] => Array
                        (
                            [Session] => SessionComponent Object
                                (
                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [components] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                        )

                                )

                            [DataUtils] => DataUtilsComponent Object
                                (
                                    [name] => DataUtils
                                    [controller] => OrthologsController Object
 *RECURSION*
                                    [components] => Array
                                        (
                                            [0] => ExternalPrograms
                                            [1] => FunctionalUtils
                                            [2] => GeneFamilies
                                            [3] => GenomeBrowser
                                        )

                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                            [ExternalPrograms] => Array
                                                (
                                                    [class] => ExternalPrograms
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                            [FunctionalUtils] => Array
                                                (
                                                    [class] => FunctionalUtils
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                            [GeneFamilies] => Array
                                                (
                                                    [class] => GeneFamilies
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                            [GenomeBrowser] => Array
                                                (
                                                    [class] => GenomeBrowser
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                        )

                                    [GeneFamilies] => GeneFamiliesComponent Object
                                        (
                                            [name] => GeneFamilies
                                            [controller:GeneFamiliesComponent:private] => OrthologsController Object
 *RECURSION*
                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                            [settings] => Array
                                                (
                                                )

                                            [components] => Array
                                                (
                                                )

                                            [_componentMap:protected] => Array
                                                (
                                                )

                                        )

                                )

                            [FunctionalAnnotationUtils] => FunctionalAnnotationUtilsComponent Object
                                (
                                    [name] => FunctionalAnnotationUtils
                                    [controller] => OrthologsController Object
 *RECURSION*
                                    [components] => Array
                                        (
                                            [0] => FunctionalUtils
                                        )

                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                            [FunctionalUtils] => Array
                                                (
                                                    [class] => FunctionalUtils
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                        )

                                )

                            [GeneFamilies] => GeneFamiliesComponent Object
                                (
                                    [name] => GeneFamilies
                                    [controller:GeneFamiliesComponent:private] => OrthologsController Object
 *RECURSION*
                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [components] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                        )

                                )

                            [Organism] => OrganismComponent Object
                                (
                                    [name] => Organism
                                    [controller:OrganismComponent:private] => OrthologsController Object
 *RECURSION*
                                    [components] => Array
                                        (
                                            [0] => GenomeBrowser
                                        )

                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                            [GenomeBrowser] => Array
                                                (
                                                    [class] => GenomeBrowser
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                        )

                                )

                            [Blast] => BlastComponent Object
                                (
                                    [name] => Blast
                                    [controller] => OrthologsController Object
 *RECURSION*
                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [components] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                        )

                                )

                            [WorkbenchUtils] => WorkbenchUtilsComponent Object
 *RECURSION*
                            [Orthology] => OrthologyComponent Object
                                (
                                    [name] => Orthology
                                    [controller:OrthologyComponent:private] => OrthologsController Object
 *RECURSION*
                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [components] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                        )

                                )

                        )

                    [defaultPriority] => 10
                )

            [settings] => Array
                (
                )

            [_componentMap:protected] => Array
                (
                    [ExternalPrograms] => Array
                        (
                            [class] => ExternalPrograms
                            [settings] => Array
                                (
                                )

                        )

                    [FormUtils] => Array
                        (
                            [class] => FormUtils
                            [settings] => Array
                                (
                                )

                        )

                    [FunctionalUtils] => Array
                        (
                            [class] => FunctionalUtils
                            [settings] => Array
                                (
                                )

                        )

                    [GeneFamilies] => Array
                        (
                            [class] => GeneFamilies
                            [settings] => Array
                                (
                                )

                        )

                    [WorkbenchSharedAccessRights] => Array
                        (
                            [class] => WorkbenchSharedAccessRights
                            [settings] => Array
                                (
                                )

                        )

                )

        )

    [Orthology] => OrthologyComponent Object
        (
            [name] => Orthology
            [controller:OrthologyComponent:private] => OrthologsController Object
 *RECURSION*
            [_Collection:protected] => ComponentCollection Object
                (
                    [_Controller:protected] => OrthologsController Object
 *RECURSION*
                    [_enabled:protected] => Array
                        (
                            [Session] => Array
                                (
                                    [0] => 10
                                    [1] => 1
                                )

                            [DataUtils] => Array
                                (
                                    [0] => 10
                                    [1] => 2
                                )

                            [FunctionalAnnotationUtils] => Array
                                (
                                    [0] => 10
                                    [1] => 3
                                )

                            [GeneFamilies] => Array
                                (
                                    [0] => 10
                                    [1] => 4
                                )

                            [Organism] => Array
                                (
                                    [0] => 10
                                    [1] => 5
                                )

                            [Blast] => Array
                                (
                                    [0] => 10
                                    [1] => 6
                                )

                            [WorkbenchUtils] => Array
                                (
                                    [0] => 10
                                    [1] => 7
                                )

                            [Orthology] => Array
                                (
                                    [0] => 10
                                    [1] => 8
                                )

                        )

                    [_loaded:protected] => Array
                        (
                            [Session] => SessionComponent Object
                                (
                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [components] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                        )

                                )

                            [DataUtils] => DataUtilsComponent Object
                                (
                                    [name] => DataUtils
                                    [controller] => OrthologsController Object
 *RECURSION*
                                    [components] => Array
                                        (
                                            [0] => ExternalPrograms
                                            [1] => FunctionalUtils
                                            [2] => GeneFamilies
                                            [3] => GenomeBrowser
                                        )

                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                            [ExternalPrograms] => Array
                                                (
                                                    [class] => ExternalPrograms
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                            [FunctionalUtils] => Array
                                                (
                                                    [class] => FunctionalUtils
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                            [GeneFamilies] => Array
                                                (
                                                    [class] => GeneFamilies
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                            [GenomeBrowser] => Array
                                                (
                                                    [class] => GenomeBrowser
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                        )

                                    [GeneFamilies] => GeneFamiliesComponent Object
                                        (
                                            [name] => GeneFamilies
                                            [controller:GeneFamiliesComponent:private] => OrthologsController Object
 *RECURSION*
                                            [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                            [settings] => Array
                                                (
                                                )

                                            [components] => Array
                                                (
                                                )

                                            [_componentMap:protected] => Array
                                                (
                                                )

                                        )

                                )

                            [FunctionalAnnotationUtils] => FunctionalAnnotationUtilsComponent Object
                                (
                                    [name] => FunctionalAnnotationUtils
                                    [controller] => OrthologsController Object
 *RECURSION*
                                    [components] => Array
                                        (
                                            [0] => FunctionalUtils
                                        )

                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                            [FunctionalUtils] => Array
                                                (
                                                    [class] => FunctionalUtils
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                        )

                                )

                            [GeneFamilies] => GeneFamiliesComponent Object
                                (
                                    [name] => GeneFamilies
                                    [controller:GeneFamiliesComponent:private] => OrthologsController Object
 *RECURSION*
                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [components] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                        )

                                )

                            [Organism] => OrganismComponent Object
                                (
                                    [name] => Organism
                                    [controller:OrganismComponent:private] => OrthologsController Object
 *RECURSION*
                                    [components] => Array
                                        (
                                            [0] => GenomeBrowser
                                        )

                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                            [GenomeBrowser] => Array
                                                (
                                                    [class] => GenomeBrowser
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                        )

                                )

                            [Blast] => BlastComponent Object
                                (
                                    [name] => Blast
                                    [controller] => OrthologsController Object
 *RECURSION*
                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [components] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                        )

                                )

                            [WorkbenchUtils] => WorkbenchUtilsComponent Object
                                (
                                    [name] => WorkbenchUtils
                                    [controller:WorkbenchUtilsComponent:private] => OrthologsController Object
 *RECURSION*
                                    [components] => Array
                                        (
                                            [0] => ExternalPrograms
                                            [1] => FormUtils
                                            [2] => FunctionalUtils
                                            [3] => GeneFamilies
                                            [4] => WorkbenchSharedAccessRights
                                        )

                                    [_Collection:protected] => ComponentCollection Object
 *RECURSION*
                                    [settings] => Array
                                        (
                                        )

                                    [_componentMap:protected] => Array
                                        (
                                            [ExternalPrograms] => Array
                                                (
                                                    [class] => ExternalPrograms
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                            [FormUtils] => Array
                                                (
                                                    [class] => FormUtils
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                            [FunctionalUtils] => Array
                                                (
                                                    [class] => FunctionalUtils
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                            [GeneFamilies] => Array
                                                (
                                                    [class] => GeneFamilies
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                            [WorkbenchSharedAccessRights] => Array
                                                (
                                                    [class] => WorkbenchSharedAccessRights
                                                    [settings] => Array
                                                        (
                                                        )

                                                )

                                        )

                                )

                            [Orthology] => OrthologyComponent Object
 *RECURSION*
                        )

                    [defaultPriority] => 10
                )

            [settings] => Array
                (
                )

            [components] => Array
                (
                )

            [_componentMap:protected] => Array
                (
                )

        )

    [Annotation] => Annotation Object
        (
            [name] => Annotation
            [useTable] => annotation
            [primaryKey] => gene_id
            [cacheQueries] => 
            [cacheSources] => 
            [belongsTo] => Array
                (
                    [AnnotSource] => Array
                        (
                            [foreignKey] => species
                            [className] => AnnotSource
                            [conditions] => 
                            [fields] => 
                            [order] => 
                            [counterCache] => 
                        )

                )

            [hasMany] => Array
                (
                    [GfDatum] => Array
                        (
                            [foreignKey] => gene_id
                            [className] => GfDatum
                            [conditions] => 
                            [fields] => 
                            [order] => 
                            [limit] => 
                            [offset] => 
                            [dependent] => 
                            [exclusive] => 
                            [finderQuery] => 
                            [counterQuery] => 
                        )

                )

            [useDbConfig] => default
            [id] => 
            [data] => Array
                (
                )

            [schemaName] => db_plaza_public_dicots_05
            [table] => annotation
            [_schema:protected] => Array
                (
                    [gene_id] => Array
                        (
                            [type] => string
                            [null] => 
                            [default] => 
                            [length] => 50
                            [key] => primary
                            [collate] => latin1_swedish_ci
                            [charset] => latin1
                        )

                    [species] => Array
                        (
                            [type] => string
                            [null] => 
                            [default] => 
                            [length] => 21
                            [key] => index
                            [collate] => latin1_swedish_ci
                            [charset] => latin1
                        )

                    [transcript] => Array
                        (
                            [type] => string
                            [null] => 1
                            [default] => 
                            [length] => 100
                            [key] => index
                            [collate] => latin1_swedish_ci
                            [charset] => latin1
                        )

                    [coord_cds] => Array
                        (
                            [type] => text
                            [null] => 1
                            [default] => 
                            [length] => 
                            [collate] => latin1_swedish_ci
                            [charset] => latin1
                        )

                    [start] => Array
                        (
                            [type] => integer
                            [null] => 
                            [default] => 0
                            [length] => 
                            [unsigned] => 
                        )

                    [stop] => Array
                        (
                            [type] => integer
                            [null] => 
                            [default] => 0
                            [length] => 
                            [unsigned] => 
                        )

                    [coord_transcript] => Array
                        (
                            [type] => text
                            [null] => 1
                            [default] => 
                            [length] => 
                            [collate] => latin1_swedish_ci
                            [charset] => latin1
                        )

                    [seq] => Array
                        (
                            [type] => text
                            [null] => 
                            [default] => 
                            [length] => 
                            [collate] => latin1_swedish_ci
                            [charset] => latin1
                        )

                    [strand] => Array
                        (
                            [type] => string
                            [null] => 
                            [default] => 
                            [length] => 1
                            [collate] => latin1_swedish_ci
                            [charset] => latin1
                        )

                    [chr] => Array
                        (
                            [type] => string
                            [null] => 
                            [default] => 
                            [length] => 100
                            [key] => index
                            [collate] => latin1_swedish_ci
                            [charset] => latin1
                        )

                    [type] => Array
                        (
                            [type] => enum('coding','rna','te','pseudo')
                            [null] => 
                            [default] => coding
                            [length] => 6
                            [key] => index
                            [collate] => latin1_swedish_ci
                            [charset] => latin1
                        )

                    [check_transcript] => Array
                        (
                            [type] => enum('none','ne','eq')
                            [null] => 
                            [default] => none
                            [length] => 4
                            [key] => index
                            [collate] => latin1_swedish_ci
                            [charset] => latin1
                        )

                    [check_protein] => Array
                        (
                            [type] => enum('none','ne','eq')
                            [null] => 
                            [default] => none
                            [length] => 4
                            [key] => index
                            [collate] => latin1_swedish_ci
                            [charset] => latin1
                        )

                    [transl_table] => Array
                        (
                            [type] => tinyinteger
                            [null] => 
                            [default] => 1
                            [length] => 
                            [unsigned] => 
                        )

                )

            [validate] => Array
                (
                )

            [validationErrors] => Array
                (
                )

            [validationDomain] => 
            [tablePrefix] => 
            [plugin] => 
            [alias] => Annotation
            [tableToModel] => Array
                (
                    [annotation] => Annotation
                )

            [hasOne] => Array
                (
                )

            [hasAndBelongsToMany] => Array
                (
                )

            [actsAs] => 
            [Behaviors] => BehaviorCollection Object
                (
                    [modelName] => Annotation
                    [_methods:protected] => Array
                        (
                        )

                    [_mappedMethods:protected] => Array
                        (
                        )

                    [_enabled:protected] => Array
                        (
                        )

                    [_loaded:protected] => Array
                        (
                        )

                    [defaultPriority] => 10
                )

            [whitelist] => Array
                (
                )

            [findQueryType] => 
            [recursive] => 1
            [order] => 
            [virtualFields] => Array
                (
                )

            [_associationKeys:protected] => Array
                (
                    [belongsTo] => Array
                        (
                            [0] => className
                            [1] => foreignKey
                            [2] => conditions
                            [3] => fields
                            [4] => order
                            [5] => counterCache
                        )

                    [hasOne] => Array
                        (
                            [0] => className
                            [1] => foreignKey
                            [2] => conditions
                            [3] => fields
                            [4] => order
                            [5] => dependent
                        )

                    [hasMany] => Array
                        (
                            [0] => className
                            [1] => foreignKey
                            [2] => conditions
                            [3] => fields
                            [4] => order
                            [5] => limit
                            [6] => offset
                            [7] => dependent
                            [8] => exclusive
                            [9] => finderQuery
                            [10] => counterQuery
                        )

                    [hasAndBelongsToMany] => Array
                        (
                            [0] => className
                            [1] => joinTable
                            [2] => with
                            [3] => foreignKey
                            [4] => associationForeignKey
                            [5] => conditions
                            [6] => fields
                            [7] => order
                            [8] => limit
                            [9] => offset
                            [10] => unique
                            [11] => finderQuery
                        )

                )

            [_associations:protected] => Array
                (
                    [0] => belongsTo
                    [1] => hasOne
                    [2] => hasMany
                    [3] => hasAndBelongsToMany
                )

            [__backAssociation] => Array
                (
                )

            [__backInnerAssociation] => Array
                (
                )

            [__backOriginalAssociation] => Array
                (
                )

            [__backContainableAssociation] => Array
                (
                )

            [__safeUpdateMode] => 
            [useConsistentAfterFind] => 1
            [_insertID:protected] => 
            [_sourceConfigured:protected] => 1
            [findMethods] => Array
                (
                    [all] => 1
                    [first] => 1
                    [count] => 1
                    [neighbors] => 1
                    [list] => 1
                    [threaded] => 1
                )

            [_eventManager:protected] => CakeEventManager Object
                (
                    [_listeners:protected] => Array
                        (
                            [Model.beforeFind] => Array
                                (
                                    [10] => Array
                                        (
                                            [0] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => BehaviorCollection Object
                                                                (
                                                                    [modelName] => Annotation
                                                                    [_methods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_mappedMethods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_enabled:protected] => Array
                                                                        (
                                                                        )

                                                                    [_loaded:protected] => Array
                                                                        (
                                                                        )

                                                                    [defaultPriority] => 10
                                                                )

                                                            [1] => trigger
                                                        )

                                                    [passParams] => 
                                                )

                                            [1] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => Annotation Object
 *RECURSION*
                                                            [1] => beforeFind
                                                        )

                                                    [passParams] => 1
                                                )

                                        )

                                )

                            [Model.afterFind] => Array
                                (
                                    [10] => Array
                                        (
                                            [0] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => BehaviorCollection Object
                                                                (
                                                                    [modelName] => Annotation
                                                                    [_methods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_mappedMethods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_enabled:protected] => Array
                                                                        (
                                                                        )

                                                                    [_loaded:protected] => Array
                                                                        (
                                                                        )

                                                                    [defaultPriority] => 10
                                                                )

                                                            [1] => trigger
                                                        )

                                                    [passParams] => 
                                                )

                                            [1] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => Annotation Object
 *RECURSION*
                                                            [1] => afterFind
                                                        )

                                                    [passParams] => 1
                                                )

                                        )

                                )

                            [Model.beforeValidate] => Array
                                (
                                    [10] => Array
                                        (
                                            [0] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => BehaviorCollection Object
                                                                (
                                                                    [modelName] => Annotation
                                                                    [_methods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_mappedMethods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_enabled:protected] => Array
                                                                        (
                                                                        )

                                                                    [_loaded:protected] => Array
                                                                        (
                                                                        )

                                                                    [defaultPriority] => 10
                                                                )

                                                            [1] => trigger
                                                        )

                                                    [passParams] => 
                                                )

                                            [1] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => Annotation Object
 *RECURSION*
                                                            [1] => beforeValidate
                                                        )

                                                    [passParams] => 1
                                                )

                                        )

                                )

                            [Model.afterValidate] => Array
                                (
                                    [10] => Array
                                        (
                                            [0] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => BehaviorCollection Object
                                                                (
                                                                    [modelName] => Annotation
                                                                    [_methods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_mappedMethods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_enabled:protected] => Array
                                                                        (
                                                                        )

                                                                    [_loaded:protected] => Array
                                                                        (
                                                                        )

                                                                    [defaultPriority] => 10
                                                                )

                                                            [1] => trigger
                                                        )

                                                    [passParams] => 
                                                )

                                            [1] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => Annotation Object
 *RECURSION*
                                                            [1] => afterValidate
                                                        )

                                                    [passParams] => 
                                                )

                                        )

                                )

                            [Model.beforeSave] => Array
                                (
                                    [10] => Array
                                        (
                                            [0] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => BehaviorCollection Object
                                                                (
                                                                    [modelName] => Annotation
                                                                    [_methods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_mappedMethods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_enabled:protected] => Array
                                                                        (
                                                                        )

                                                                    [_loaded:protected] => Array
                                                                        (
                                                                        )

                                                                    [defaultPriority] => 10
                                                                )

                                                            [1] => trigger
                                                        )

                                                    [passParams] => 
                                                )

                                            [1] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => Annotation Object
 *RECURSION*
                                                            [1] => beforeSave
                                                        )

                                                    [passParams] => 1
                                                )

                                        )

                                )

                            [Model.afterSave] => Array
                                (
                                    [10] => Array
                                        (
                                            [0] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => BehaviorCollection Object
                                                                (
                                                                    [modelName] => Annotation
                                                                    [_methods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_mappedMethods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_enabled:protected] => Array
                                                                        (
                                                                        )

                                                                    [_loaded:protected] => Array
                                                                        (
                                                                        )

                                                                    [defaultPriority] => 10
                                                                )

                                                            [1] => trigger
                                                        )

                                                    [passParams] => 
                                                )

                                            [1] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => Annotation Object
 *RECURSION*
                                                            [1] => afterSave
                                                        )

                                                    [passParams] => 1
                                                )

                                        )

                                )

                            [Model.beforeDelete] => Array
                                (
                                    [10] => Array
                                        (
                                            [0] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => BehaviorCollection Object
                                                                (
                                                                    [modelName] => Annotation
                                                                    [_methods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_mappedMethods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_enabled:protected] => Array
                                                                        (
                                                                        )

                                                                    [_loaded:protected] => Array
                                                                        (
                                                                        )

                                                                    [defaultPriority] => 10
                                                                )

                                                            [1] => trigger
                                                        )

                                                    [passParams] => 
                                                )

                                            [1] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => Annotation Object
 *RECURSION*
                                                            [1] => beforeDelete
                                                        )

                                                    [passParams] => 1
                                                )

                                        )

                                )

                            [Model.afterDelete] => Array
                                (
                                    [10] => Array
                                        (
                                            [0] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => BehaviorCollection Object
                                                                (
                                                                    [modelName] => Annotation
                                                                    [_methods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_mappedMethods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_enabled:protected] => Array
                                                                        (
                                                                        )

                                                                    [_loaded:protected] => Array
                                                                        (
                                                                        )

                                                                    [defaultPriority] => 10
                                                                )

                                                            [1] => trigger
                                                        )

                                                    [passParams] => 
                                                )

                                            [1] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => Annotation Object
 *RECURSION*
                                                            [1] => afterDelete
                                                        )

                                                    [passParams] => 
                                                )

                                        )

                                )

                        )

                    [_isGlobal:protected] => 
                )

            [_validator:protected] => 
        )

    [AnnotSource] => AnnotSource Object
        (
            [name] => AnnotSource
            [useTable] => annot_sources
            [primaryKey] => species
            [displayField] => common_name
            [useDbConfig] => default
            [id] => 
            [data] => Array
                (
                )

            [schemaName] => db_plaza_public_dicots_05
            [table] => annot_sources
            [_schema:protected] => Array
                (
                    [source] => Array
                        (
                            [type] => string
                            [null] => 
                            [default] => 
                            [length] => 255
                            [collate] => latin1_swedish_ci
                            [charset] => latin1
                        )

                    [url] => Array
                        (
                            [type] => string
                            [null] => 
                            [default] => 
                            [length] => 250
                            [collate] => latin1_swedish_ci
                            [charset] => latin1
                        )

                    [species] => Array
                        (
                            [type] => string
                            [null] => 
                            [default] => 
                            [length] => 21
                            [key] => primary
                            [collate] => latin1_swedish_ci
                            [charset] => latin1
                        )

                    [common_name] => Array
                        (
                            [type] => string
                            [null] => 
                            [default] => 
                            [length] => 100
                            [key] => index
                            [collate] => latin1_swedish_ci
                            [charset] => latin1
                        )

                    [eco_type] => Array
                        (
                            [type] => string
                            [null] => 1
                            [default] => 
                            [length] => 100
                            [collate] => latin1_swedish_ci
                            [charset] => latin1
                        )

                    [description] => Array
                        (
                            [type] => text
                            [null] => 
                            [default] => 
                            [length] => 
                            [collate] => latin1_swedish_ci
                            [charset] => latin1
                        )

                    [paper] => Array
                        (
                            [type] => text
                            [null] => 1
                            [default] => 
                            [length] => 
                            [collate] => latin1_swedish_ci
                            [charset] => latin1
                        )

                    [pubmed_id] => Array
                        (
                            [type] => integer
                            [null] => 1
                            [default] => 
                            [length] => 
                            [unsigned] => 
                        )

                    [tax_id] => Array
                        (
                            [type] => integer
                            [null] => 
                            [default] => 0
                            [length] => 
                            [unsigned] => 
                        )

                    [mitochondrion] => Array
                        (
                            [type] => string
                            [null] => 1
                            [default] => 
                            [length] => 15
                            [collate] => latin1_swedish_ci
                            [charset] => latin1
                        )

                    [chloroplast] => Array
                        (
                            [type] => string
                            [null] => 1
                            [default] => 
                            [length] => 15
                            [collate] => latin1_swedish_ci
                            [charset] => latin1
                        )

                    [disclaimer] => Array
                        (
                            [type] => text
                            [null] => 1
                            [default] => 
                            [length] => 
                            [collate] => latin1_swedish_ci
                            [charset] => latin1
                        )

                )

            [validate] => Array
                (
                )

            [validationErrors] => Array
                (
                )

            [validationDomain] => 
            [tablePrefix] => 
            [plugin] => 
            [alias] => AnnotSource
            [tableToModel] => Array
                (
                    [annot_sources] => AnnotSource
                )

            [cacheQueries] => 
            [belongsTo] => Array
                (
                )

            [hasOne] => Array
                (
                )

            [hasMany] => Array
                (
                )

            [hasAndBelongsToMany] => Array
                (
                )

            [actsAs] => 
            [Behaviors] => BehaviorCollection Object
                (
                    [modelName] => AnnotSource
                    [_methods:protected] => Array
                        (
                        )

                    [_mappedMethods:protected] => Array
                        (
                        )

                    [_enabled:protected] => Array
                        (
                        )

                    [_loaded:protected] => Array
                        (
                        )

                    [defaultPriority] => 10
                )

            [whitelist] => Array
                (
                )

            [cacheSources] => 1
            [findQueryType] => 
            [recursive] => 1
            [order] => 
            [virtualFields] => Array
                (
                )

            [_associationKeys:protected] => Array
                (
                    [belongsTo] => Array
                        (
                            [0] => className
                            [1] => foreignKey
                            [2] => conditions
                            [3] => fields
                            [4] => order
                            [5] => counterCache
                        )

                    [hasOne] => Array
                        (
                            [0] => className
                            [1] => foreignKey
                            [2] => conditions
                            [3] => fields
                            [4] => order
                            [5] => dependent
                        )

                    [hasMany] => Array
                        (
                            [0] => className
                            [1] => foreignKey
                            [2] => conditions
                            [3] => fields
                            [4] => order
                            [5] => limit
                            [6] => offset
                            [7] => dependent
                            [8] => exclusive
                            [9] => finderQuery
                            [10] => counterQuery
                        )

                    [hasAndBelongsToMany] => Array
                        (
                            [0] => className
                            [1] => joinTable
                            [2] => with
                            [3] => foreignKey
                            [4] => associationForeignKey
                            [5] => conditions
                            [6] => fields
                            [7] => order
                            [8] => limit
                            [9] => offset
                            [10] => unique
                            [11] => finderQuery
                        )

                )

            [_associations:protected] => Array
                (
                    [0] => belongsTo
                    [1] => hasOne
                    [2] => hasMany
                    [3] => hasAndBelongsToMany
                )

            [__backAssociation] => Array
                (
                )

            [__backInnerAssociation] => Array
                (
                )

            [__backOriginalAssociation] => Array
                (
                )

            [__backContainableAssociation] => Array
                (
                )

            [__safeUpdateMode] => 
            [useConsistentAfterFind] => 1
            [_insertID:protected] => 
            [_sourceConfigured:protected] => 1
            [findMethods] => Array
                (
                    [all] => 1
                    [first] => 1
                    [count] => 1
                    [neighbors] => 1
                    [list] => 1
                    [threaded] => 1
                )

            [_eventManager:protected] => CakeEventManager Object
                (
                    [_listeners:protected] => Array
                        (
                            [Model.beforeFind] => Array
                                (
                                    [10] => Array
                                        (
                                            [0] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => BehaviorCollection Object
                                                                (
                                                                    [modelName] => AnnotSource
                                                                    [_methods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_mappedMethods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_enabled:protected] => Array
                                                                        (
                                                                        )

                                                                    [_loaded:protected] => Array
                                                                        (
                                                                        )

                                                                    [defaultPriority] => 10
                                                                )

                                                            [1] => trigger
                                                        )

                                                    [passParams] => 
                                                )

                                            [1] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => AnnotSource Object
 *RECURSION*
                                                            [1] => beforeFind
                                                        )

                                                    [passParams] => 1
                                                )

                                        )

                                )

                            [Model.afterFind] => Array
                                (
                                    [10] => Array
                                        (
                                            [0] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => BehaviorCollection Object
                                                                (
                                                                    [modelName] => AnnotSource
                                                                    [_methods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_mappedMethods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_enabled:protected] => Array
                                                                        (
                                                                        )

                                                                    [_loaded:protected] => Array
                                                                        (
                                                                        )

                                                                    [defaultPriority] => 10
                                                                )

                                                            [1] => trigger
                                                        )

                                                    [passParams] => 
                                                )

                                            [1] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => AnnotSource Object
 *RECURSION*
                                                            [1] => afterFind
                                                        )

                                                    [passParams] => 1
                                                )

                                        )

                                )

                            [Model.beforeValidate] => Array
                                (
                                    [10] => Array
                                        (
                                            [0] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => BehaviorCollection Object
                                                                (
                                                                    [modelName] => AnnotSource
                                                                    [_methods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_mappedMethods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_enabled:protected] => Array
                                                                        (
                                                                        )

                                                                    [_loaded:protected] => Array
                                                                        (
                                                                        )

                                                                    [defaultPriority] => 10
                                                                )

                                                            [1] => trigger
                                                        )

                                                    [passParams] => 
                                                )

                                            [1] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => AnnotSource Object
 *RECURSION*
                                                            [1] => beforeValidate
                                                        )

                                                    [passParams] => 1
                                                )

                                        )

                                )

                            [Model.afterValidate] => Array
                                (
                                    [10] => Array
                                        (
                                            [0] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => BehaviorCollection Object
                                                                (
                                                                    [modelName] => AnnotSource
                                                                    [_methods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_mappedMethods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_enabled:protected] => Array
                                                                        (
                                                                        )

                                                                    [_loaded:protected] => Array
                                                                        (
                                                                        )

                                                                    [defaultPriority] => 10
                                                                )

                                                            [1] => trigger
                                                        )

                                                    [passParams] => 
                                                )

                                            [1] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => AnnotSource Object
 *RECURSION*
                                                            [1] => afterValidate
                                                        )

                                                    [passParams] => 
                                                )

                                        )

                                )

                            [Model.beforeSave] => Array
                                (
                                    [10] => Array
                                        (
                                            [0] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => BehaviorCollection Object
                                                                (
                                                                    [modelName] => AnnotSource
                                                                    [_methods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_mappedMethods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_enabled:protected] => Array
                                                                        (
                                                                        )

                                                                    [_loaded:protected] => Array
                                                                        (
                                                                        )

                                                                    [defaultPriority] => 10
                                                                )

                                                            [1] => trigger
                                                        )

                                                    [passParams] => 
                                                )

                                            [1] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => AnnotSource Object
 *RECURSION*
                                                            [1] => beforeSave
                                                        )

                                                    [passParams] => 1
                                                )

                                        )

                                )

                            [Model.afterSave] => Array
                                (
                                    [10] => Array
                                        (
                                            [0] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => BehaviorCollection Object
                                                                (
                                                                    [modelName] => AnnotSource
                                                                    [_methods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_mappedMethods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_enabled:protected] => Array
                                                                        (
                                                                        )

                                                                    [_loaded:protected] => Array
                                                                        (
                                                                        )

                                                                    [defaultPriority] => 10
                                                                )

                                                            [1] => trigger
                                                        )

                                                    [passParams] => 
                                                )

                                            [1] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => AnnotSource Object
 *RECURSION*
                                                            [1] => afterSave
                                                        )

                                                    [passParams] => 1
                                                )

                                        )

                                )

                            [Model.beforeDelete] => Array
                                (
                                    [10] => Array
                                        (
                                            [0] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => BehaviorCollection Object
                                                                (
                                                                    [modelName] => AnnotSource
                                                                    [_methods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_mappedMethods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_enabled:protected] => Array
                                                                        (
                                                                        )

                                                                    [_loaded:protected] => Array
                                                                        (
                                                                        )

                                                                    [defaultPriority] => 10
                                                                )

                                                            [1] => trigger
                                                        )

                                                    [passParams] => 
                                                )

                                            [1] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => AnnotSource Object
 *RECURSION*
                                                            [1] => beforeDelete
                                                        )

                                                    [passParams] => 1
                                                )

                                        )

                                )

                            [Model.afterDelete] => Array
                                (
                                    [10] => Array
                                        (
                                            [0] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => BehaviorCollection Object
                                                                (
                                                                    [modelName] => AnnotSource
                                                                    [_methods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_mappedMethods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_enabled:protected] => Array
                                                                        (
                                                                        )

                                                                    [_loaded:protected] => Array
                                                                        (
                                                                        )

                                                                    [defaultPriority] => 10
                                                                )

                                                            [1] => trigger
                                                        )

                                                    [passParams] => 
                                                )

                                            [1] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => AnnotSource Object
 *RECURSION*
                                                            [1] => afterDelete
                                                        )

                                                    [passParams] => 
                                                )

                                        )

                                )

                        )

                    [_isGlobal:protected] => 
                )

            [_validator:protected] => 
        )

    [Configuration] => Configuration Object
        (
            [name] => Configuration
            [useTable] => configuration
            [useDbConfig] => default
            [id] => 
            [data] => Array
                (
                )

            [schemaName] => db_plaza_public_dicots_05
            [table] => configuration
            [primaryKey] => id
            [_schema:protected] => Array
                (
                    [method] => Array
                        (
                            [type] => string
                            [null] => 
                            [default] => 
                            [length] => 100
                            [key] => primary
                            [collate] => latin1_swedish_ci
                            [charset] => latin1
                        )

                    [key] => Array
                        (
                            [type] => string
                            [null] => 
                            [default] => 
                            [length] => 255
                            [key] => primary
                            [collate] => latin1_swedish_ci
                            [charset] => latin1
                        )

                    [value] => Array
                        (
                            [type] => text
                            [null] => 
                            [default] => 
                            [length] => 
                            [key] => primary
                            [collate] => latin1_swedish_ci
                            [charset] => latin1
                        )

                    [comment] => Array
                        (
                            [type] => text
                            [null] => 
                            [default] => 
                            [length] => 
                            [key] => primary
                            [collate] => latin1_swedish_ci
                            [charset] => latin1
                        )

                )

            [validate] => Array
                (
                )

            [validationErrors] => Array
                (
                )

            [validationDomain] => 
            [tablePrefix] => 
            [plugin] => 
            [alias] => Configuration
            [tableToModel] => Array
                (
                    [configuration] => Configuration
                )

            [cacheQueries] => 
            [belongsTo] => Array
                (
                )

            [hasOne] => Array
                (
                )

            [hasMany] => Array
                (
                )

            [hasAndBelongsToMany] => Array
                (
                )

            [actsAs] => 
            [Behaviors] => BehaviorCollection Object
                (
                    [modelName] => Configuration
                    [_methods:protected] => Array
                        (
                        )

                    [_mappedMethods:protected] => Array
                        (
                        )

                    [_enabled:protected] => Array
                        (
                        )

                    [_loaded:protected] => Array
                        (
                        )

                    [defaultPriority] => 10
                )

            [whitelist] => Array
                (
                )

            [cacheSources] => 1
            [findQueryType] => 
            [recursive] => 1
            [order] => 
            [virtualFields] => Array
                (
                )

            [_associationKeys:protected] => Array
                (
                    [belongsTo] => Array
                        (
                            [0] => className
                            [1] => foreignKey
                            [2] => conditions
                            [3] => fields
                            [4] => order
                            [5] => counterCache
                        )

                    [hasOne] => Array
                        (
                            [0] => className
                            [1] => foreignKey
                            [2] => conditions
                            [3] => fields
                            [4] => order
                            [5] => dependent
                        )

                    [hasMany] => Array
                        (
                            [0] => className
                            [1] => foreignKey
                            [2] => conditions
                            [3] => fields
                            [4] => order
                            [5] => limit
                            [6] => offset
                            [7] => dependent
                            [8] => exclusive
                            [9] => finderQuery
                            [10] => counterQuery
                        )

                    [hasAndBelongsToMany] => Array
                        (
                            [0] => className
                            [1] => joinTable
                            [2] => with
                            [3] => foreignKey
                            [4] => associationForeignKey
                            [5] => conditions
                            [6] => fields
                            [7] => order
                            [8] => limit
                            [9] => offset
                            [10] => unique
                            [11] => finderQuery
                        )

                )

            [_associations:protected] => Array
                (
                    [0] => belongsTo
                    [1] => hasOne
                    [2] => hasMany
                    [3] => hasAndBelongsToMany
                )

            [__backAssociation] => Array
                (
                )

            [__backInnerAssociation] => Array
                (
                )

            [__backOriginalAssociation] => Array
                (
                )

            [__backContainableAssociation] => Array
                (
                )

            [__safeUpdateMode] => 
            [useConsistentAfterFind] => 1
            [_insertID:protected] => 
            [_sourceConfigured:protected] => 1
            [findMethods] => Array
                (
                    [all] => 1
                    [first] => 1
                    [count] => 1
                    [neighbors] => 1
                    [list] => 1
                    [threaded] => 1
                )

            [_eventManager:protected] => CakeEventManager Object
                (
                    [_listeners:protected] => Array
                        (
                            [Model.beforeFind] => Array
                                (
                                    [10] => Array
                                        (
                                            [0] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => BehaviorCollection Object
                                                                (
                                                                    [modelName] => Configuration
                                                                    [_methods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_mappedMethods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_enabled:protected] => Array
                                                                        (
                                                                        )

                                                                    [_loaded:protected] => Array
                                                                        (
                                                                        )

                                                                    [defaultPriority] => 10
                                                                )

                                                            [1] => trigger
                                                        )

                                                    [passParams] => 
                                                )

                                            [1] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => Configuration Object
 *RECURSION*
                                                            [1] => beforeFind
                                                        )

                                                    [passParams] => 1
                                                )

                                        )

                                )

                            [Model.afterFind] => Array
                                (
                                    [10] => Array
                                        (
                                            [0] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => BehaviorCollection Object
                                                                (
                                                                    [modelName] => Configuration
                                                                    [_methods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_mappedMethods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_enabled:protected] => Array
                                                                        (
                                                                        )

                                                                    [_loaded:protected] => Array
                                                                        (
                                                                        )

                                                                    [defaultPriority] => 10
                                                                )

                                                            [1] => trigger
                                                        )

                                                    [passParams] => 
                                                )

                                            [1] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => Configuration Object
 *RECURSION*
                                                            [1] => afterFind
                                                        )

                                                    [passParams] => 1
                                                )

                                        )

                                )

                            [Model.beforeValidate] => Array
                                (
                                    [10] => Array
                                        (
                                            [0] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => BehaviorCollection Object
                                                                (
                                                                    [modelName] => Configuration
                                                                    [_methods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_mappedMethods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_enabled:protected] => Array
                                                                        (
                                                                        )

                                                                    [_loaded:protected] => Array
                                                                        (
                                                                        )

                                                                    [defaultPriority] => 10
                                                                )

                                                            [1] => trigger
                                                        )

                                                    [passParams] => 
                                                )

                                            [1] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => Configuration Object
 *RECURSION*
                                                            [1] => beforeValidate
                                                        )

                                                    [passParams] => 1
                                                )

                                        )

                                )

                            [Model.afterValidate] => Array
                                (
                                    [10] => Array
                                        (
                                            [0] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => BehaviorCollection Object
                                                                (
                                                                    [modelName] => Configuration
                                                                    [_methods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_mappedMethods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_enabled:protected] => Array
                                                                        (
                                                                        )

                                                                    [_loaded:protected] => Array
                                                                        (
                                                                        )

                                                                    [defaultPriority] => 10
                                                                )

                                                            [1] => trigger
                                                        )

                                                    [passParams] => 
                                                )

                                            [1] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => Configuration Object
 *RECURSION*
                                                            [1] => afterValidate
                                                        )

                                                    [passParams] => 
                                                )

                                        )

                                )

                            [Model.beforeSave] => Array
                                (
                                    [10] => Array
                                        (
                                            [0] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => BehaviorCollection Object
                                                                (
                                                                    [modelName] => Configuration
                                                                    [_methods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_mappedMethods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_enabled:protected] => Array
                                                                        (
                                                                        )

                                                                    [_loaded:protected] => Array
                                                                        (
                                                                        )

                                                                    [defaultPriority] => 10
                                                                )

                                                            [1] => trigger
                                                        )

                                                    [passParams] => 
                                                )

                                            [1] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => Configuration Object
 *RECURSION*
                                                            [1] => beforeSave
                                                        )

                                                    [passParams] => 1
                                                )

                                        )

                                )

                            [Model.afterSave] => Array
                                (
                                    [10] => Array
                                        (
                                            [0] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => BehaviorCollection Object
                                                                (
                                                                    [modelName] => Configuration
                                                                    [_methods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_mappedMethods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_enabled:protected] => Array
                                                                        (
                                                                        )

                                                                    [_loaded:protected] => Array
                                                                        (
                                                                        )

                                                                    [defaultPriority] => 10
                                                                )

                                                            [1] => trigger
                                                        )

                                                    [passParams] => 
                                                )

                                            [1] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => Configuration Object
 *RECURSION*
                                                            [1] => afterSave
                                                        )

                                                    [passParams] => 1
                                                )

                                        )

                                )

                            [Model.beforeDelete] => Array
                                (
                                    [10] => Array
                                        (
                                            [0] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => BehaviorCollection Object
                                                                (
                                                                    [modelName] => Configuration
                                                                    [_methods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_mappedMethods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_enabled:protected] => Array
                                                                        (
                                                                        )

                                                                    [_loaded:protected] => Array
                                                                        (
                                                                        )

                                                                    [defaultPriority] => 10
                                                                )

                                                            [1] => trigger
                                                        )

                                                    [passParams] => 
                                                )

                                            [1] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => Configuration Object
 *RECURSION*
                                                            [1] => beforeDelete
                                                        )

                                                    [passParams] => 1
                                                )

                                        )

                                )

                            [Model.afterDelete] => Array
                                (
                                    [10] => Array
                                        (
                                            [0] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => BehaviorCollection Object
                                                                (
                                                                    [modelName] => Configuration
                                                                    [_methods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_mappedMethods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_enabled:protected] => Array
                                                                        (
                                                                        )

                                                                    [_loaded:protected] => Array
                                                                        (
                                                                        )

                                                                    [defaultPriority] => 10
                                                                )

                                                            [1] => trigger
                                                        )

                                                    [passParams] => 
                                                )

                                            [1] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => Configuration Object
 *RECURSION*
                                                            [1] => afterDelete
                                                        )

                                                    [passParams] => 
                                                )

                                        )

                                )

                        )

                    [_isGlobal:protected] => 
                )

            [_validator:protected] => 
        )

    [Orthologs] => Orthologs Object
        (
            [name] => Orthologs
            [useTable] => orthologs
            [useDbConfig] => default
            [id] => 
            [data] => Array
                (
                )

            [schemaName] => db_plaza_public_dicots_05
            [table] => orthologs
            [primaryKey] => id
            [_schema:protected] => Array
                (
                    [gene_id] => Array
                        (
                            [type] => string
                            [null] => 
                            [default] => 
                            [length] => 50
                            [key] => primary
                            [collate] => latin1_swedish_ci
                            [charset] => latin1
                        )

                    [species] => Array
                        (
                            [type] => string
                            [null] => 
                            [default] => 
                            [length] => 21
                            [key] => index
                            [collate] => latin1_swedish_ci
                            [charset] => latin1
                        )

                    [type] => Array
                        (
                            [type] => enum('ORTHO','anchor_point','BHIF','TROG')
                            [null] => 
                            [default] => 
                            [length] => 12
                            [key] => primary
                            [collate] => latin1_swedish_ci
                            [charset] => latin1
                        )

                    [gene_content] => Array
                        (
                            [type] => text
                            [null] => 
                            [default] => 
                            [length] => 
                            [collate] => latin1_swedish_ci
                            [charset] => latin1
                        )

                    [comment] => Array
                        (
                            [type] => text
                            [null] => 1
                            [default] => 
                            [length] => 
                            [collate] => latin1_swedish_ci
                            [charset] => latin1
                        )

                )

            [validate] => Array
                (
                )

            [validationErrors] => Array
                (
                )

            [validationDomain] => 
            [tablePrefix] => 
            [plugin] => 
            [alias] => Orthologs
            [tableToModel] => Array
                (
                    [orthologs] => Orthologs
                )

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            [_associations:protected] => Array
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            [__safeUpdateMode] => 
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                    [count] => 1
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            [_eventManager:protected] => CakeEventManager Object
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                                                                    [_mappedMethods:protected] => Array
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                                                                    [_enabled:protected] => Array
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                                                                    [_loaded:protected] => Array
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                                                            [1] => trigger
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                                                    [passParams] => 
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                                            [1] => Array
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                                                                        )

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                                                            [1] => trigger
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                                            [1] => Array
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                                                                    [_mappedMethods:protected] => Array
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                                                                    [_enabled:protected] => Array
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                                                                        )

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                                                                        )

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                                                            [1] => trigger
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                                            [1] => Array
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                                                                    [_mappedMethods:protected] => Array
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                                                                    [_enabled:protected] => Array
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                                                                        )

                                                                    [_loaded:protected] => Array
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                                                            [1] => trigger
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                                                    [passParams] => 
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                                            [1] => Array
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                                                                    [_mappedMethods:protected] => Array
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                                                                    [defaultPriority] => 10
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                                                            [1] => trigger
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                                            [1] => Array
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                                                                    [_methods:protected] => Array
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                                                                    [_mappedMethods:protected] => Array
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                                                                    [_enabled:protected] => Array
                                                                        (
                                                                        )

                                                                    [_loaded:protected] => Array
                                                                        (
                                                                        )

                                                                    [defaultPriority] => 10
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                                                            [1] => trigger
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                                                    [passParams] => 
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                                            [1] => Array
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                                                                    [_mappedMethods:protected] => Array
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                                                                        (
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                                                            [1] => trigger
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                                                    [passParams] => 
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                                            [1] => Array
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                                            [1] => Array
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                                                    [passParams] => 
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                                        )

                                )

                        )

                    [_isGlobal:protected] => 
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            [_validator:protected] => 
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    [AdExperiments] => AdExperiments Object
        (
            [name] => AdExperiments
            [useTable] => ad_experiments
            [primaryKey] => exp_id
            [useDbConfig] => default
            [id] => 
            [data] => Array
                (
                )

            [schemaName] => db_plaza_public_dicots_05
            [table] => ad_experiments
            [_schema:protected] => Array
                (
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                        (
                            [type] => smallinteger
                            [null] => 
                            [default] => 0
                            [length] => 
                            [unsigned] => 1
                            [key] => primary
                        )

                    [description] => Array
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                            [type] => string
                            [null] => 
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                            [length] => 255
                            [collate] => latin1_swedish_ci
                            [charset] => latin1
                        )

                    [description_advanced] => Array
                        (
                            [type] => text
                            [null] => 1
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                            [length] => 
                            [collate] => latin1_swedish_ci
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                        )

                    [organisms] => Array
                        (
                            [type] => string
                            [null] => 
                            [default] => 
                            [length] => 512
                            [collate] => latin1_swedish_ci
                            [charset] => latin1
                        )

                    [to_show] => Array
                        (
                            [type] => enum('true','false')
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                            [default] => false
                            [length] => 5
                            [collate] => latin1_swedish_ci
                            [charset] => latin1
                        )

                )

            [validate] => Array
                (
                )

            [validationErrors] => Array
                (
                )

            [validationDomain] => 
            [tablePrefix] => 
            [plugin] => 
            [alias] => AdExperiments
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                (
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                )

            [cacheQueries] => 
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                (
                )

            [hasOne] => Array
                (
                )

            [hasMany] => Array
                (
                )

            [hasAndBelongsToMany] => Array
                (
                )

            [actsAs] => 
            [Behaviors] => BehaviorCollection Object
                (
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                    [_methods:protected] => Array
                        (
                        )

                    [_mappedMethods:protected] => Array
                        (
                        )

                    [_enabled:protected] => Array
                        (
                        )

                    [_loaded:protected] => Array
                        (
                        )

                    [defaultPriority] => 10
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                (
                )

            [cacheSources] => 1
            [findQueryType] => 
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                (
                )

            [_associationKeys:protected] => Array
                (
                    [belongsTo] => Array
                        (
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                    [hasMany] => Array
                        (
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                            [10] => counterQuery
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                    [hasAndBelongsToMany] => Array
                        (
                            [0] => className
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                            [11] => finderQuery
                        )

                )

            [_associations:protected] => Array
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                )

            [__backAssociation] => Array
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                )

            [__backInnerAssociation] => Array
                (
                )

            [__backOriginalAssociation] => Array
                (
                )

            [__backContainableAssociation] => Array
                (
                )

            [__safeUpdateMode] => 
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            [_insertID:protected] => 
            [_sourceConfigured:protected] => 1
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                    [all] => 1
                    [first] => 1
                    [count] => 1
                    [neighbors] => 1
                    [list] => 1
                    [threaded] => 1
                )

            [_eventManager:protected] => CakeEventManager Object
                (
                    [_listeners:protected] => Array
                        (
                            [Model.beforeFind] => Array
                                (
                                    [10] => Array
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                                                (
                                                    [callable] => Array
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                                                                (
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                                                                    [_methods:protected] => Array
                                                                        (
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                                                                    [_mappedMethods:protected] => Array
                                                                        (
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                                                                    [_enabled:protected] => Array
                                                                        (
                                                                        )

                                                                    [_loaded:protected] => Array
                                                                        (
                                                                        )

                                                                    [defaultPriority] => 10
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                                                            [1] => trigger
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                                                    [passParams] => 
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                                            [1] => Array
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                                                                    [_mappedMethods:protected] => Array
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                                                            [1] => trigger
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                                            [1] => Array
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                                                    [passParams] => 
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                                )

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                                                (
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                                                                        (
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                                                                    [_mappedMethods:protected] => Array
                                                                        (
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                                                                    [_enabled:protected] => Array
                                                                        (
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                                                                    [_loaded:protected] => Array
                                                                        (
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                                                            [1] => trigger
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                                                    [passParams] => 
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                                            [1] => Array
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                                                    [passParams] => 1
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                            [Model.afterSave] => Array
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                                                                    [_methods:protected] => Array
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                                                                    [_mappedMethods:protected] => Array
                                                                        (
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                                                                    [_enabled:protected] => Array
                                                                        (
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                                                            [1] => trigger
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                                            [1] => Array
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                            [Model.beforeDelete] => Array
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                                                                    [_mappedMethods:protected] => Array
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                                                                    [_enabled:protected] => Array
                                                                        (
                                                                        )

                                                                    [_loaded:protected] => Array
                                                                        (
                                                                        )

                                                                    [defaultPriority] => 10
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                                                            [1] => trigger
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                                            [1] => Array
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                                                    [passParams] => 1
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                                )

                            [Model.afterDelete] => Array
                                (
                                    [10] => Array
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                                            [0] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => BehaviorCollection Object
                                                                (
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                                                                    [_methods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_mappedMethods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_enabled:protected] => Array
                                                                        (
                                                                        )

                                                                    [_loaded:protected] => Array
                                                                        (
                                                                        )

                                                                    [defaultPriority] => 10
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                                                            [1] => trigger
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                                                    [passParams] => 
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                                            [1] => Array
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                                                    [passParams] => 
                                                )

                                        )

                                )

                        )

                    [_isGlobal:protected] => 
                )

            [_validator:protected] => 
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    [FunctionalClustersExperiments] => FunctionalClustersExperiments Object
        (
            [name] => FunctionalClustersExperiments
            [useTable] => functional_clusters_experiments
            [useDbConfig] => default
            [id] => 
            [data] => Array
                (
                )

            [schemaName] => db_plaza_public_dicots_05
            [table] => functional_clusters_experiments
            [primaryKey] => id
            [_schema:protected] => Array
                (
                    [exp_id] => Array
                        (
                            [type] => tinyinteger
                            [null] => 
                            [default] => 
                            [length] => 
                            [unsigned] => 
                            [key] => primary
                        )

                    [data_type] => Array
                        (
                            [type] => enum('GO','InterPro','MapMan')
                            [null] => 
                            [default] => 
                            [length] => 8
                            [key] => index
                            [collate] => latin1_swedish_ci
                            [charset] => latin1
                        )

                    [extra] => Array
                        (
                            [type] => string
                            [null] => 1
                            [default] => 
                            [length] => 30
                            [collate] => latin1_swedish_ci
                            [charset] => latin1
                        )

                    [min_genes_cluster] => Array
                        (
                            [type] => integer
                            [null] => 1
                            [default] => 
                            [length] => 
                            [unsigned] => 
                        )

                    [max_genes_cluster] => Array
                        (
                            [type] => integer
                            [null] => 1
                            [default] => 
                            [length] => 
                            [unsigned] => 
                        )

                    [max_cluster_size] => Array
                        (
                            [type] => integer
                            [null] => 1
                            [default] => 
                            [length] => 
                            [unsigned] => 
                        )

                    [e-value] => Array
                        (
                            [type] => float
                            [null] => 1
                            [default] => 
                            [length] => 
                            [unsigned] => 
                        )

                    [cluster_overlap] => Array
                        (
                            [type] => integer
                            [null] => 1
                            [default] => 
                            [length] => 
                            [unsigned] => 
                        )

                    [has_tandems] => Array
                        (
                            [type] => boolean
                            [null] => 1
                            [default] => 
                            [length] => 1
                        )

                )

            [validate] => Array
                (
                )

            [validationErrors] => Array
                (
                )

            [validationDomain] => 
            [tablePrefix] => 
            [plugin] => 
            [alias] => FunctionalClustersExperiments
            [tableToModel] => Array
                (
                    [functional_clusters_experiments] => FunctionalClustersExperiments
                )

            [cacheQueries] => 
            [belongsTo] => Array
                (
                )

            [hasOne] => Array
                (
                )

            [hasMany] => Array
                (
                )

            [hasAndBelongsToMany] => Array
                (
                )

            [actsAs] => 
            [Behaviors] => BehaviorCollection Object
                (
                    [modelName] => FunctionalClustersExperiments
                    [_methods:protected] => Array
                        (
                        )

                    [_mappedMethods:protected] => Array
                        (
                        )

                    [_enabled:protected] => Array
                        (
                        )

                    [_loaded:protected] => Array
                        (
                        )

                    [defaultPriority] => 10
                )

            [whitelist] => Array
                (
                )

            [cacheSources] => 1
            [findQueryType] => 
            [recursive] => 1
            [order] => 
            [virtualFields] => Array
                (
                )

            [_associationKeys:protected] => Array
                (
                    [belongsTo] => Array
                        (
                            [0] => className
                            [1] => foreignKey
                            [2] => conditions
                            [3] => fields
                            [4] => order
                            [5] => counterCache
                        )

                    [hasOne] => Array
                        (
                            [0] => className
                            [1] => foreignKey
                            [2] => conditions
                            [3] => fields
                            [4] => order
                            [5] => dependent
                        )

                    [hasMany] => Array
                        (
                            [0] => className
                            [1] => foreignKey
                            [2] => conditions
                            [3] => fields
                            [4] => order
                            [5] => limit
                            [6] => offset
                            [7] => dependent
                            [8] => exclusive
                            [9] => finderQuery
                            [10] => counterQuery
                        )

                    [hasAndBelongsToMany] => Array
                        (
                            [0] => className
                            [1] => joinTable
                            [2] => with
                            [3] => foreignKey
                            [4] => associationForeignKey
                            [5] => conditions
                            [6] => fields
                            [7] => order
                            [8] => limit
                            [9] => offset
                            [10] => unique
                            [11] => finderQuery
                        )

                )

            [_associations:protected] => Array
                (
                    [0] => belongsTo
                    [1] => hasOne
                    [2] => hasMany
                    [3] => hasAndBelongsToMany
                )

            [__backAssociation] => Array
                (
                )

            [__backInnerAssociation] => Array
                (
                )

            [__backOriginalAssociation] => Array
                (
                )

            [__backContainableAssociation] => Array
                (
                )

            [__safeUpdateMode] => 
            [useConsistentAfterFind] => 1
            [_insertID:protected] => 
            [_sourceConfigured:protected] => 1
            [findMethods] => Array
                (
                    [all] => 1
                    [first] => 1
                    [count] => 1
                    [neighbors] => 1
                    [list] => 1
                    [threaded] => 1
                )

            [_eventManager:protected] => CakeEventManager Object
                (
                    [_listeners:protected] => Array
                        (
                            [Model.beforeFind] => Array
                                (
                                    [10] => Array
                                        (
                                            [0] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => BehaviorCollection Object
                                                                (
                                                                    [modelName] => FunctionalClustersExperiments
                                                                    [_methods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_mappedMethods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_enabled:protected] => Array
                                                                        (
                                                                        )

                                                                    [_loaded:protected] => Array
                                                                        (
                                                                        )

                                                                    [defaultPriority] => 10
                                                                )

                                                            [1] => trigger
                                                        )

                                                    [passParams] => 
                                                )

                                            [1] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => FunctionalClustersExperiments Object
 *RECURSION*
                                                            [1] => beforeFind
                                                        )

                                                    [passParams] => 1
                                                )

                                        )

                                )

                            [Model.afterFind] => Array
                                (
                                    [10] => Array
                                        (
                                            [0] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => BehaviorCollection Object
                                                                (
                                                                    [modelName] => FunctionalClustersExperiments
                                                                    [_methods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_mappedMethods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_enabled:protected] => Array
                                                                        (
                                                                        )

                                                                    [_loaded:protected] => Array
                                                                        (
                                                                        )

                                                                    [defaultPriority] => 10
                                                                )

                                                            [1] => trigger
                                                        )

                                                    [passParams] => 
                                                )

                                            [1] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => FunctionalClustersExperiments Object
 *RECURSION*
                                                            [1] => afterFind
                                                        )

                                                    [passParams] => 1
                                                )

                                        )

                                )

                            [Model.beforeValidate] => Array
                                (
                                    [10] => Array
                                        (
                                            [0] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => BehaviorCollection Object
                                                                (
                                                                    [modelName] => FunctionalClustersExperiments
                                                                    [_methods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_mappedMethods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_enabled:protected] => Array
                                                                        (
                                                                        )

                                                                    [_loaded:protected] => Array
                                                                        (
                                                                        )

                                                                    [defaultPriority] => 10
                                                                )

                                                            [1] => trigger
                                                        )

                                                    [passParams] => 
                                                )

                                            [1] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => FunctionalClustersExperiments Object
 *RECURSION*
                                                            [1] => beforeValidate
                                                        )

                                                    [passParams] => 1
                                                )

                                        )

                                )

                            [Model.afterValidate] => Array
                                (
                                    [10] => Array
                                        (
                                            [0] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => BehaviorCollection Object
                                                                (
                                                                    [modelName] => FunctionalClustersExperiments
                                                                    [_methods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_mappedMethods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_enabled:protected] => Array
                                                                        (
                                                                        )

                                                                    [_loaded:protected] => Array
                                                                        (
                                                                        )

                                                                    [defaultPriority] => 10
                                                                )

                                                            [1] => trigger
                                                        )

                                                    [passParams] => 
                                                )

                                            [1] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => FunctionalClustersExperiments Object
 *RECURSION*
                                                            [1] => afterValidate
                                                        )

                                                    [passParams] => 
                                                )

                                        )

                                )

                            [Model.beforeSave] => Array
                                (
                                    [10] => Array
                                        (
                                            [0] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => BehaviorCollection Object
                                                                (
                                                                    [modelName] => FunctionalClustersExperiments
                                                                    [_methods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_mappedMethods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_enabled:protected] => Array
                                                                        (
                                                                        )

                                                                    [_loaded:protected] => Array
                                                                        (
                                                                        )

                                                                    [defaultPriority] => 10
                                                                )

                                                            [1] => trigger
                                                        )

                                                    [passParams] => 
                                                )

                                            [1] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => FunctionalClustersExperiments Object
 *RECURSION*
                                                            [1] => beforeSave
                                                        )

                                                    [passParams] => 1
                                                )

                                        )

                                )

                            [Model.afterSave] => Array
                                (
                                    [10] => Array
                                        (
                                            [0] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => BehaviorCollection Object
                                                                (
                                                                    [modelName] => FunctionalClustersExperiments
                                                                    [_methods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_mappedMethods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_enabled:protected] => Array
                                                                        (
                                                                        )

                                                                    [_loaded:protected] => Array
                                                                        (
                                                                        )

                                                                    [defaultPriority] => 10
                                                                )

                                                            [1] => trigger
                                                        )

                                                    [passParams] => 
                                                )

                                            [1] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => FunctionalClustersExperiments Object
 *RECURSION*
                                                            [1] => afterSave
                                                        )

                                                    [passParams] => 1
                                                )

                                        )

                                )

                            [Model.beforeDelete] => Array
                                (
                                    [10] => Array
                                        (
                                            [0] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => BehaviorCollection Object
                                                                (
                                                                    [modelName] => FunctionalClustersExperiments
                                                                    [_methods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_mappedMethods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_enabled:protected] => Array
                                                                        (
                                                                        )

                                                                    [_loaded:protected] => Array
                                                                        (
                                                                        )

                                                                    [defaultPriority] => 10
                                                                )

                                                            [1] => trigger
                                                        )

                                                    [passParams] => 
                                                )

                                            [1] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => FunctionalClustersExperiments Object
 *RECURSION*
                                                            [1] => beforeDelete
                                                        )

                                                    [passParams] => 1
                                                )

                                        )

                                )

                            [Model.afterDelete] => Array
                                (
                                    [10] => Array
                                        (
                                            [0] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => BehaviorCollection Object
                                                                (
                                                                    [modelName] => FunctionalClustersExperiments
                                                                    [_methods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_mappedMethods:protected] => Array
                                                                        (
                                                                        )

                                                                    [_enabled:protected] => Array
                                                                        (
                                                                        )

                                                                    [_loaded:protected] => Array
                                                                        (
                                                                        )

                                                                    [defaultPriority] => 10
                                                                )

                                                            [1] => trigger
                                                        )

                                                    [passParams] => 
                                                )

                                            [1] => Array
                                                (
                                                    [callable] => Array
                                                        (
                                                            [0] => FunctionalClustersExperiments Object
 *RECURSION*
                                                            [1] => afterDelete
                                                        )

                                                    [passParams] => 
                                                )

                                        )

                                )

                        )

                    [_isGlobal:protected] => 
                )

            [_validator:protected] => 
        )

    [Msa] => Msa Object
        (
            [name] => Msa
            [useTable] => msa
            [primaryKey] => msa_id
            [useDbConfig] => default
            [id] => 
            [data] => Array
                (
                )

            [schemaName] => 
            [table] => msa
            [_schema:protected] => 
            [validate] => Array
                (
                )

            [validationErrors] => Array
                (
                )

            [validationDomain] => 
            [plugin] => 
            [alias] => Msa
            [tableToModel] => Array
                (
                    [msa] => Msa
                )

            [cacheQueries] => 
            [belongsTo] => Array
                (
                )

            [hasOne] => Array
                (
                )

            [hasMany] => Array
                (
                )

            [hasAndBelongsToMany] => Array
                (
                )

            [actsAs] => 
            [Behaviors] => BehaviorCollection Object
                (
                    [modelName] => Msa
                    [_methods:protected] => Array
                        (
                        )

                    [_mappedMethods:protected] => Array
                        (
                        )

                    [_enabled:protected] => Array
                        (
                        )

                    [_loaded:protected] => Array
                        (
                        )

                    [defaultPriority] => 10
                )

            [whitelist] => Array
                (
                )

            [cacheSources] => 1
            [findQueryType] => 
            [recursive] => 1
            [order] => 
            [virtualFields] => Array
                (
                )

            [_associationKeys:protected] => Array
                (
                    [belongsTo] => Array
                        (
                            [0] => className
                            [1] => foreignKey
                            [2] => conditions
                            [3] => fields
                            [4] => order
                            [5] => counterCache
                        )

                    [hasOne] => Array
                        (
                            [0] => className
                            [1] => foreignKey
                            [2] => conditions
                            [3] => fields
                            [4] => order
                            [5] => dependent
                        )

                    [hasMany] => Array
                        (
                            [0] => className
                            [1] => foreignKey
                            [2] => conditions
                            [3] => fields
                            [4] => order
                            [5] => limit
                            [6] => offset
                            [7] => dependent
                            [8] => exclusive
                            [9] => finderQuery
                            [10] => counterQuery
                        )

                    [hasAndBelongsToMany] => Array
                        (
                            [0] => className
                            [1] => joinTable
                            [2] => with
                            [3] => foreignKey
                            [4] => associationForeignKey
                            [5] => conditions
                            [6] => fields
                            [7] => order
                            [8] => limit
                            [9] => offset
                            [10] => unique
                            [11] => finderQuery
                        )

                )

            [_associations:protected] => Array
                (
                    [0] => belongsTo
                    [1] => hasOne
                    [2] => hasMany
                    [3] => hasAndBelongsToMany
                )

            [__backAssociation] => Array
                (
                )

            [__backInnerAssociation] => Array
                (
                )

            [__backOriginalAssociation] => Array
                (
                )

            [__backContainableAssociation] => Array
                (
                )

            [__safeUpdateMode] => 
            [useConsistentAfterFind] => 1
            [_insertID:protected] => 
            [_sourceConfigured:protected] => 
            [findMethods] => Array
                (
                    [all] => 1
                    [first] => 1
                    [count] => 1
                    [neighbors] => 1
                    [list] => 1
                    [threaded] => 1
                )

            [_eventManager:protected] => 
            [_validator:protected] => 
        )

    [Trees] => Trees Object
        (
            [name] => Trees
            [useTable] => trees
            [useDbConfig] => default
            [id] => 
            [data] => Array
                (
                )

            [schemaName] => 
            [table] => trees
            [primaryKey] => id
            [_schema:protected] => 
            [validate] => Array
                (
                )

            [validationErrors] => Array
                (
                )

            [validationDomain] => 
            [plugin] => 
            [alias] => Trees
            [tableToModel] => Array
                (
                    [trees] => Trees
                )

            [cacheQueries] => 
            [belongsTo] => Array
                (
                )

            [hasOne] => Array
                (
                )

            [hasMany] => Array
                (
                )

            [hasAndBelongsToMany] => Array
                (
                )

            [actsAs] => 
            [Behaviors] => BehaviorCollection Object
                (
                    [modelName] => Trees
                    [_methods:protected] => Array
                        (
                        )

                    [_mappedMethods:protected] => Array
                        (
                        )

                    [_enabled:protected] => Array
                        (
                        )

                    [_loaded:protected] => Array
                        (
                        )

                    [defaultPriority] => 10
                )

            [whitelist] => Array
                (
                )

            [cacheSources] => 1
            [findQueryType] => 
            [recursive] => 1
            [order] => 
            [virtualFields] => Array
                (
                )

            [_associationKeys:protected] => Array
                (
                    [belongsTo] => Array
                        (
                            [0] => className
                            [1] => foreignKey
                            [2] => conditions
                            [3] => fields
                            [4] => order
                            [5] => counterCache
                        )

                    [hasOne] => Array
                        (
                            [0] => className
                            [1] => foreignKey
                            [2] => conditions
                            [3] => fields
                            [4] => order
                            [5] => dependent
                        )

                    [hasMany] => Array
                        (
                            [0] => className
                            [1] => foreignKey
                            [2] => conditions
                            [3] => fields
                            [4] => order
                            [5] => limit
                            [6] => offset
                            [7] => dependent
                            [8] => exclusive
                            [9] => finderQuery
                            [10] => counterQuery
                        )

                    [hasAndBelongsToMany] => Array
                        (
                            [0] => className
                            [1] => joinTable
                            [2] => with
                            [3] => foreignKey
                            [4] => associationForeignKey
                            [5] => conditions
                            [6] => fields
                            [7] => order
                            [8] => limit
                            [9] => offset
                            [10] => unique
                            [11] => finderQuery
                        )

                )

            [_associations:protected] => Array
                (
                    [0] => belongsTo
                    [1] => hasOne
                    [2] => hasMany
                    [3] => hasAndBelongsToMany
                )

            [__backAssociation] => Array
                (
                )

            [__backInnerAssociation] => Array
                (
                )

            [__backOriginalAssociation] => Array
                (
                )

            [__backContainableAssociation] => Array
                (
                )

            [__safeUpdateMode] => 
            [useConsistentAfterFind] => 1
            [_insertID:protected] => 
            [_sourceConfigured:protected] => 
            [findMethods] => Array
                (
                    [all] => 1
                    [first] => 1
                    [count] => 1
                    [neighbors] => 1
                    [list] => 1
                    [threaded] => 1
                )

            [_eventManager:protected] => 
            [_validator:protected] => 
        )

)
controller
Notice (8): Trying to get property 'Configuration' of non-object [APP/Controller/Component/GenomeBrowserComponent.php, line 105]
Errors

Call to a member function getBasicSpeciesTree() on null

Error: An Internal Error Has Occurred.

Stack Trace

  • APP/Controller/Component/DataUtilsComponent.php line 65GenomeBrowserComponent->getValidatedDataSettings()
  • APP/Controller/AppController.php line 94DataUtilsComponent->getSidebarToolsInfo()
  • CORE/Cake/Event/CakeEventManager.php line 243AppController->beforeRender()
  • CORE/Cake/Controller/Controller.php line 936CakeEventManager->dispatch()
  • CORE/Cake/Routing/Dispatcher.php line 200Controller->render()
  • CORE/Cake/Routing/Dispatcher.php line 167Dispatcher->_invoke()
  • APP/webroot/index.php line 151Dispatcher->dispatch()