Gene: TPR.G5280

General Information

Structural Information

Species Trifolium pratense
Gene Identifier TPR.G5280
Transcript Identifier TPR.T5459
Gene Type Coding gene
Location Tp57577_TGAC_v2_LG4 : 26401609-26406179 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D002125
#Genes/#Species 314/97
Phylogenetic origin

ID ORTHO05D002105
#Genes/#Species 317/96
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

tid Tp57577_TGAC_v2_mRNA5459.v2
id Tp57577_TGAC_v2_gene5280.v2
pacid 35966401

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006511	ISO	PLAZA Integrative Orthology	ubiquitin-dependent protein catabolic process	AT5G01720
GO:0016567	ISO	PLAZA Integrative Orthology	protein ubiquitination	AT5G01720

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT5G01720
GO:0019005	ISO	PLAZA Integrative Orthology	SCF ubiquitin ligase complex	AT5G01720

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR032675	Leucine-rich repeat domain superfamily
IPR006553	Leucine-rich repeat, cysteine-containing subtype
IPR001611	Leucine-rich repeat

Mapman id	Description
19.2.2.8.1.4.4	Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ubiquitin ligase complexes.F-BOX substrate adaptor activities.substrate adaptor (RAE-like)