Gene: Sopen04g036050

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen04g036050
  • Transcript Identifier Sopen04g036050.1
  • Gene Type Coding gene
  • Location Spenn-ch04 : 76794138-76803914 : negative

Gene Family Information

  • ID HOM05D000002
  • #Genes/#Species 26594/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen04g036050.1

Descriptions

  • Description ubiquitin-conjugating enzyme 16 (UBC16) | FUNCTIONS IN: ubiquitin-protein ligase activity, small conjugating protein ligase activity | INVOLVED IN: ubiquitin-dependent protein catabolic process | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like , Ubiquitin-conjugating enzyme, E2 | BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 18
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR029472 Retrotransposon Copia-like, N-terminal
IPR000608 Ubiquitin-conjugating enzyme E2
IPR036397 Ribonuclease H superfamily
IPR013103 Reverse transcriptase, RNA-dependent DNA polymerase
IPR016135 Ubiquitin-conjugating enzyme/RWD-like
IPR012337 Ribonuclease H-like superfamily
IPR043502 DNA/RNA polymerase superfamily
Mapman id Description
19.2.2.1.3 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-conjugating E2 protein (UBC)