Gene: Sopen03g021220

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g021220
  • Transcript Identifier Sopen03g021220.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 52529719-52531151 : positive

Gene Family Information

  • ID HOM05D000173
  • #Genes/#Species 2168/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g021220.1

Descriptions

  • Description Member of Actin gene family.Mutants are defective in germination and root growth. | actin 7 (ACT7) | FUNCTIONS IN: protein binding, structural constituent of cytoskeleton | INVOLVED IN: in 9 processes | LOCATED IN: mitochondrion, nucleolus, cell wall, cytoskeleton, plasma membrane | EXPRESSED IN: 29 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Actin, conserved site , Actin/actin-like , Actin/actin-like conserved site | BEST Arabidopsis thaliana protein match is: actin 3
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009845
ISO
PLAZA Integrative Orthologyseed germination AT5G09810
GO:0051301
ISO
PLAZA Integrative Orthologycell division AT5G09810
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT5G09810
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT5G09810
GO:0009416
ISO
PLAZA Integrative Orthologyresponse to light stimulus AT5G09810
GO:0048767
ISO
PLAZA Integrative Orthologyroot hair elongation AT5G09810
GO:0006893
ISO
PLAZA Integrative OrthologyGolgi to plasma membrane transport AT5G09810
GO:0009611
ISO
PLAZA Integrative Orthologyresponse to wounding AT5G09810
GO:0008104
ISO
PLAZA Integrative Orthologyprotein localization AT5G09810
GO:0007010
ISO
PLAZA Integrative Orthologycytoskeleton organization AT5G09810
GO:0010053
ISO
PLAZA Integrative Orthologyroot epidermal cell differentiation AT5G09810

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G09810

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G09810
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT5G09810
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT5G09810
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT5G09810
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT5G09810
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT5G09810
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT5G09810
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT5G09810

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004000 Actin family
IPR043129 ATPase, nucleotide binding domain
Mapman id Description
20.2.1 Cytoskeleton organisation.microfilament network.actin filament protein