Gene: Solyc11g066790.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc11g066790.2
  • Transcript Identifier Solyc11g066790.2.1
  • Gene Type Coding gene
  • Location SL4.0ch11 : 50614880-50624141 : positive

Gene Family Information

  • ID HOM05D000515
  • #Genes/#Species 1048/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc11g066790.2.1
  • uniprot A0A3Q7IYX3
  • gene_id Solyc11g066790

Descriptions

  • Description SNF2-related (AHRD V3.3 *** A0A200R575_9MAGN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045003
ISO
PLAZA Integrative Orthologydouble-strand break repair via synthesis-dependent strand annealing AT5G22750
GO:0000724
ISO
PLAZA Integrative Orthologydouble-strand break repair via homologous recombination AT5G22750
GO:0036297
ISO
PLAZA Integrative Orthologyinterstrand cross-link repair AT5G22750
GO:0009294
ISO
PLAZA Integrative OrthologyDNA mediated transformation AT5G22750

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0016818
IEA
GOA Databasehydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0016818
IEA
InterProhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0070615
IEA
GOA Databasenucleosome-dependent ATPase activity
GO:0070615
IEA
InterPronucleosome-dependent ATPase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0046872
IEA
InterPrometal ion binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001650 Helicase, C-terminal
IPR014905 HIRAN domain
IPR038718 SNF2-like, N-terminal domain superfamily
IPR018957 Zinc finger, C3HC4 RING-type
IPR000330 SNF2, N-terminal
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR001841 Zinc finger, RING-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
12.4.8.3.1 Chromatin organisation.nucleosome remodeling.other chromatin remodeling activities.Rad5/16-like group.chromatin remodeling factor (Rad5)