Gene: Solyc11g039540.1
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc11g039540.1
- Transcript Identifier Solyc11g039540.1.1
- Gene Type Coding gene
- Location SL4.0ch11 : 42565590-42566115 : negative
Gene Family Information
- ID HOM05D000001
- #Genes/#Species 35287/100
- Phylogenetic origin
- ID ORTHO05D017855
- #Genes/#Species 9/8
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc11g039540.1.1
- uniprot K4D7T3
- gene_id Solyc11g039540
Descriptions
- Description Pentatricopeptide repeat-containing protein (AHRD V3.3 *-* A0A2G2WQH4_CAPBA)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009451 | IBA | GOA Database | RNA modification |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008270 | IEA | GOA Database | zinc ion binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0003723 | IBA | GOA Database | RNA binding | |
| GO:0005515 | ISO | PLAZA Homology (enrichment) | protein binding | HOM05D000001 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0043231 | IBA | GOA Database | intracellular membrane-bounded organelle |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR032867 | DYW domain |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |