Gene: Solyc11g007170.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc11g007170.2
  • Transcript Identifier Solyc11g007170.2.1
  • Gene Type Coding gene
  • Location SL4.0ch11 : 1639621-1644360 : negative

Gene Family Information

  • ID HOM05D000147
  • #Genes/#Species 2513/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc11g007170.2.1
  • uniprot A0A3Q7IPI1
  • gene_id Solyc11g007170

Descriptions

  • Description Katanin p60 ATPase-containing subunit A1 (AHRD V3.3 *** A0A2I0VAX0_9ASPA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007033
IBA
GOA Databasevacuole organization
GO:0016197
IBA
GOA Databaseendosomal transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0016887
IEA
InterProATP hydrolysis activity
GO:0000166
IEA
GOA Databasenucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0005634
IBA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007330 MIT domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR003959 ATPase, AAA-type, core
IPR036181 MIT domain superfamily
IPR015415 Vps4 oligomerisation, C-terminal
IPR003593 AAA+ ATPase domain
IPR041569 AAA ATPase, AAA+ lid domain
Mapman id Description
19.4.2.2 Protein homeostasis.proteolysis.serine-type peptidase activities.S10-class serine carboxypeptidase (SCPL)
22.4.1.4.1 Vesicle trafficking.endocytic trafficking.ESCRT-mediated sorting.VPS4-VTA1 ESCRT-disassembly complex.ATPase component VPS4/SKD1