Gene: Pp3c2_6740
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c2_6740
- Transcript Identifier Pp3c2_6740V3.2
- Gene Type Coding gene
- Location Chr02 : 4420046-4422722 : negative
Gene Family Information
- ID HOM05D000001
- #Genes/#Species 35287/100
- Phylogenetic origin
- ID ORTHO05D001247
- #Genes/#Species 448/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- name Pp3c2_6740V3.2
- pacid 32936515
- alias Phpat.002G031300
- alias Pp1s7_455V6
- alias Phypa_202121
- uniprot A9RGD8
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006486 | IEA | GOA Database | protein glycosylation | |
| GO:0006486 | IEA | InterPro | protein glycosylation | |
| GO:0042546 | ISO | PLAZA Integrative Orthology | cell wall biogenesis | AT5G61840 |
| GO:0010417 | ISS | GOA Database | glucuronoxylan biosynthetic process | |
| GO:0009834 | ISS | GOA Database | plant-type secondary cell wall biogenesis | |
| GO:0045492 | ISS | GOA Database | xylan biosynthetic process | |
| GO:0071555 | IEA | GOA Database | cell wall organization |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0047517 | ISO | PLAZA Integrative Orthology | 1,4-beta-D-xylan synthase activity | AT5G61840 |
| GO:0005515 | ISO | PLAZA Homology (enrichment) | protein binding | HOM05D000001 |
| GO:0080116 | ISS | GOA Database | glucuronoxylan glucuronosyltransferase activity | |
| GO:0016740 | IEA | GOA Database | transferase activity | |
| GO:0016757 | IEA | GOA Database | glycosyltransferase activity | |
| GO:0016757 | IEA | InterPro | glycosyltransferase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005768 | ISO | PLAZA Integrative Orthology | endosome | AT5G61840 |
| GO:0005802 | ISO | PLAZA Integrative Orthology | trans-Golgi network | AT5G61840 |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0005794 | IEA | GOA Database | Golgi apparatus | |
| GO:0000139 | IEA | GOA Database | Golgi membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 21.2.2.1.3.2 | Cell wall organisation.hemicellulose.xylan.biosynthesis.xylosyltransferase activities.xylosyltransferase (IRX10) |