Gene: Pp3c14_8650

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c14_8650
  • Transcript Identifier Pp3c14_8650V3.2
  • Gene Type Coding gene
  • Location Chr14 : 5585050-5585913 : positive

Gene Family Information

  • ID HOM05D000244
  • #Genes/#Species 1727/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c14_8650V3.2
  • pacid 32960673
  • alias Phypa_17231
  • alias Pp1s79_150V6
  • alias Phpat.014G030300
  • uniprot A0A2K1JH21

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009647
ISO
PLAZA Integrative Orthologyskotomorphogenesis AT2G45430
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT2G35270
GO:0050832
ISO
PLAZA Integrative Orthologydefense response to fungus AT3G04570
GO:0009640
ISO
PLAZA Integrative Orthologyphotomorphogenesis AT2G45430
GO:0010150
ISO
PLAZA Integrative Orthologyleaf senescence AT1G20900
GO:1900425
ISO
PLAZA Integrative Orthologynegative regulation of defense response to bacterium AT4G14465
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT4G14465
GO:0048440
ISO
PLAZA Integrative Orthologycarpel development AT2G35270
GO:0009938
ISO
PLAZA Integrative Orthologynegative regulation of gibberellic acid mediated signaling pathway AT4G35390
GO:0010208
ISO
PLAZA Integrative Orthologypollen wall assembly AT2G42940
GO:0048653
ISO
PLAZA Integrative Orthologyanther development AT2G35270
GO:0010529
ISO
PLAZA Integrative Orthologynegative regulation of transposition AT2G42940
GO:0010228
ISO
PLAZA Integrative Orthologyvegetative to reproductive phase transition of meristem AT2G42940
GO:2000028
ISO
PLAZA Integrative Orthologyregulation of photoperiodism, flowering AT4G14465
GO:0035067
ISO
PLAZA Integrative Orthologynegative regulation of histone acetylation AT2G42940
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:1900111
ISO
PLAZA Integrative Orthologypositive regulation of histone H3-K9 dimethylation AT2G42940
GO:0006325
ISO
PLAZA Integrative Orthologychromatin organization AT1G20900
GO:0045824
ISO
PLAZA Integrative Orthologynegative regulation of innate immune response AT4G14465
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT3G60870

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031490
ISO
PLAZA Integrative Orthologychromatin DNA binding AT2G42940
GO:0042826
ISO
PLAZA Integrative Orthologyhistone deacetylase binding AT2G45430
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G14465
GO:0042393
ISO
PLAZA Integrative Orthologyhistone binding AT1G20900
GO:0003700
IBA
IEA
GOA DatabaseDNA-binding transcription factor activity
GO:0003680
IBA
IEA
GOA Databaseminor groove of adenine-thymine-rich DNA binding
GO:0003680
IEA
InterProminor groove of adenine-thymine-rich DNA binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003690
ISO
PLAZA Integrative Orthologydouble-stranded DNA binding AT1G20900
GO:0043621
ISO
PLAZA Integrative Orthologyprotein self-association AT4G14465

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
IEA
GOA Databasenucleus
GO:0005654
ISO
PLAZA Integrative Orthologynucleoplasm AT2G35270

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014476 AT-hook motif nuclear-localized protein 15-29
IPR005175 PPC domain
Mapman id Description
15.5.8.1 RNA biosynthesis.transcriptional regulation.AHL transcription factor superfamily.clade-A transcription factor (AHL)
15.5.8.2 RNA biosynthesis.transcriptional regulation.AHL transcription factor superfamily.clade-B transcription factor (AHL)