Gene: PGSC0003DMG400008417
General Information
Structural Information
- Species Solanum tuberosum
- Gene Identifier PGSC0003DMG400008417
- Transcript Identifier PGSC0003DMT400021697
- Gene Type Coding gene
- Location ST4.03ch11 : 18174446-18175258 : positive
Gene Family Information
- ID HOM05D001061
- #Genes/#Species 575/100
- Phylogenetic origin
- ID ORTHO05D006881
- #Genes/#Species 137/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- pacid 37465806
- id PGSC0003DMG400008417.v4.03
- uniprot M1AFK0
Descriptions
- Description Mismatch repair protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006310 | IBA | GOA Database | DNA recombination | |
| GO:0006301 | IBA | GOA Database | postreplication repair | |
| GO:0006298 | IBA IEA | GOA Database | mismatch repair | |
| GO:0006298 | IEA | InterPro | mismatch repair | |
| GO:0045910 | IBA | GOA Database | negative regulation of DNA recombination | |
| GO:0043570 | IBA | GOA Database | maintenance of DNA repeat elements |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0032137 | IBA | GOA Database | guanine/thymine mispair binding | |
| GO:0032142 | IBA | GOA Database | single guanine insertion binding | |
| GO:0032143 | IBA | GOA Database | single thymine insertion binding | |
| GO:0032181 | IBA | GOA Database | dinucleotide repeat insertion binding | |
| GO:0032357 | IBA | GOA Database | oxidized purine DNA binding | |
| GO:0032405 | IBA | GOA Database | MutLalpha complex binding | |
| GO:0008094 | IBA | GOA Database | ATPase, acting on DNA | |
| GO:0030983 | IBA IEA | GOA Database | mismatched DNA binding | |
| GO:0030983 | IEA | InterPro | mismatched DNA binding | |
| GO:0000400 | IBA | GOA Database | four-way junction DNA binding | |
| GO:0000406 | IBA | GOA Database | double-strand/single-strand DNA junction binding | |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0000166 | IEA | GOA Database | nucleotide binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0032301 | IBA | GOA Database | MutSalpha complex | |
| GO:0032300 | IBA IEA | GOA Database | mismatch repair complex | |
| GO:0032300 | IEA | InterPro | mismatch repair complex | |
| GO:0032302 | IBA | GOA Database | MutSbeta complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |