Gene: Cre02.g079300

General Information

Structural Information

  • Species Chlamydomonas reinhardtii
  • Gene Identifier Cre02.g079300
  • Transcript Identifier Cre02.g079300.t1.2
  • Gene Type Coding gene
  • Location chromosome_2 : 877452-881031 : positive

Gene Family Information

  • ID HOM05D000147
  • #Genes/#Species 2513/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Cre02.g079300.v5.5
  • pacid 30786252
  • alias g1448.t1
  • geneName VPS4
  • uniprot A8IAJ1

Descriptions

  • Description AAA-ATPase of VPS4/SKD1 family
  • Description Expressed Protein. Similar to VPS4/SKD1 AAA-ATPase, involved in vacuolar protein transport
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007033
IBA
IEA
GOA Databasevacuole organization
GO:0055078
ISO
PLAZA Integrative Orthologysodium ion homeostasis AT2G27600
GO:0055075
ISO
PLAZA Integrative Orthologypotassium ion homeostasis AT2G27600
GO:0016192
IEA
GOA Databasevesicle-mediated transport
GO:0007032
IEA
GOA Databaseendosome organization
GO:0010091
IEA
GOA Databasetrichome branching
GO:0016197
IBA
GOA Databaseendosomal transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G27600
GO:0016887
IEA
InterProATP hydrolysis activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0000166
IEA
GOA Databasenucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
IEA
GOA Databasenucleus
GO:0005737
IEA
GOA Databasecytoplasm
GO:0009506
IEA
GOA Databaseplasmodesma
GO:0016020
IEA
GOA Databasemembrane
GO:0005771
IEA
GOA Databasemultivesicular body

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003959 ATPase, AAA-type, core
IPR036181 MIT domain superfamily
IPR007330 MIT domain
IPR015415 Vps4 oligomerisation, C-terminal
IPR003593 AAA+ ATPase domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
Mapman id Description
19.4.2.2 Protein homeostasis.proteolysis.serine-type peptidase activities.S10-class serine carboxypeptidase (SCPL)
22.4.1.4.1 Vesicle trafficking.endocytic trafficking.ESCRT-mediated sorting.VPS4-VTA1 ESCRT-disassembly complex.ATPase component VPS4/SKD1