Gene: Carub.0006s1474
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0006s1474
- Transcript Identifier Carub.0006s1474.1
- Gene Type Coding gene
- Location scaffold_6 : 5446848-5448864 : positive
Gene Family Information
- ID HOM05D000568
- #Genes/#Species 974/99
- Phylogenetic origin
- ID ORTHO05D000628
- #Genes/#Species 727/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Carub.0006s1474.v1.1
- pacid 39248036
- synonym Carubv10001057m.g
Descriptions
- Description PTHR12506//PTHR12506:SF21 - PROTEIN PHOSPHATASE RELATED // SUBFAMILY NOT NAMED
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0090305 | ISO | PLAZA Integrative Orthology | nucleic acid phosphodiester bond hydrolysis | AT5G16540 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046872 | IEA | InterPro | metal ion binding | |
| GO:0003677 | ISO | PLAZA Integrative Orthology | DNA binding | AT5G16540 |
| GO:0004518 | ISO | PLAZA Integrative Orthology | nuclease activity | AT5G16540 |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT5G16540 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.16 | RNA biosynthesis.transcriptional regulation.transcription factor (C3H-ZF) |