Gene: Carub.0005s1972

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0005s1972
  • Transcript Identifier Carub.0005s1972.1
  • Gene Type Coding gene
  • Location scaffold_5 : 9857169-9860468 : positive

Gene Family Information

  • ID HOM05D000131
  • #Genes/#Species 2694/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0005s1972.v1.1
  • pacid 39225431
  • synonym Carubv10017111m.g

Descriptions

  • Description PTHR31683//PTHR31683:SF21 - FAMILY NOT NAMED // PECTATE LYASE 12-RELATED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030570
IEA
InterPropectate lyase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031225
ISO
PLAZA Integrative Orthologyanchored component of membrane AT3G53190

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002022 Pectate lyase
IPR011050 Pectin lyase fold/virulence factor
IPR018082 AmbAllergen
IPR012334 Pectin lyase fold
IPR045032 Pectin lyase family
Mapman id Description
21.3.5.2 Cell wall organisation.pectin.modification and degradation.pectate lyase