Gene: Carub.0005s1438
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0005s1438
- Transcript Identifier Carub.0005s1438.1
- Gene Type Coding gene
- Location scaffold_5 : 7902009-7903906 : negative
Gene Family Information
- ID HOM05D001141
- #Genes/#Species 542/100
- Phylogenetic origin
- ID ORTHO05D001088
- #Genes/#Species 493/100
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- id Carub.0005s1438.v1.1
- pacid 39224876
- synonym Carubv10019514m.g
Descriptions
- Description K06067 - histone deacetylase 1/2 (HDAC1_2)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016575 | IEA | InterPro | histone deacetylation | |
| GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT5G35600 |
| GO:0009553 | ISO | PLAZA Integrative Orthology | embryo sac development | AT5G35600 |
| GO:0009845 | ISO | PLAZA Integrative Orthology | seed germination | AT5G35600 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004407 | IEA | InterPro | histone deacetylase activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 12.3.2.1.1.3 | Chromatin organisation.post-translational histone modification.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase activities.histone deacetylase (HDA8) |