Gene: Carub.0005s0105

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0005s0105
  • Transcript Identifier Carub.0005s0105.1
  • Gene Type Coding gene
  • Location scaffold_5 : 431535-433755 : negative

Gene Family Information

  • ID HOM05D000037
  • #Genes/#Species 5045/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0005s0105.v1.1
  • pacid 39226248
  • synonym Carubv10017263m.g

Descriptions

  • Description 3.2.1.15 - Polygalacturonase / Pectinase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
IEA
InterProcarbohydrate metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004650
IEA
InterPropolygalacturonase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G80170

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011050 Pectin lyase fold/virulence factor
IPR006626 Parallel beta-helix repeat
IPR012334 Pectin lyase fold
IPR000743 Glycoside hydrolase, family 28
Mapman id Description
50.3.2 Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase