Gene: COL.COLO4_31223
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_31223
- Transcript Identifier COL.rna29938
- Gene Type Coding gene
- Location AWUE01020829.1 : 109909-112943 : positive
Gene Family Information
- ID HOM05D000628
- #Genes/#Species 906/100
- Phylogenetic origin
- ID ORTHO05D001866
- #Genes/#Species 344/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid rna29938
- GenBank OMO65471.1
- id gene31195
- gene_name COLO4_31223
- uniprot A0A1R3H566
Descriptions
- Description ER lumen protein retaining receptor
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015031 | IEA | GOA Database | protein transport | |
| GO:0006621 | IEA | GOA Database | protein retention in ER lumen | |
| GO:0006621 | IEA | InterPro | protein retention in ER lumen | |
| GO:0002758 | ISO | PLAZA Integrative Orthology | innate immune response-activating signal transduction | AT3G25040 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046923 | IEA | GOA Database | ER retention sequence binding | |
| GO:0046923 | IEA | InterPro | ER retention sequence binding | |
| GO:0005046 | ISO | PLAZA Integrative Orthology | KDEL sequence binding | AT1G29330 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0005789 | IEA | GOA Database | endoplasmic reticulum membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016021 | IEA | InterPro | integral component of membrane | |
| GO:0005783 | IEA | GOA Database | endoplasmic reticulum | |
| GO:0005801 | ISO | PLAZA Integrative Orthology | cis-Golgi network | AT1G29330 |
| GO:0005794 | ISO | PLAZA Integrative Orthology | Golgi apparatus | AT1G29330 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000133 | ER lumen protein retaining receptor |
| Mapman id | Description |
|---|---|
| 22.2.2.4 | Vesicle trafficking.Golgi-ER retrograde trafficking.protein cargo receptor activities.K/HDEL-signature cargo receptor (ERD2) |