Gene: AT1G60860

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G60860
  • Transcript Identifier AT1G60860.1
  • Gene Type Coding gene
  • Location Chr1 : 22401244-22407639 : negative

Gene Family Information

  • ID HOM05D001362
  • #Genes/#Species 459/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G60860.1
  • symbol AGD2
  • uniprot Q9C6C3

Descriptions

  • Description ARF-GAP domain 2
  • Computational description ARF-GAP domain 2 (AGD2); FUNCTIONS IN: ARF GTPase activator activity, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164), Pleckstrin homology-type (InterPro:IPR011993), Ankyrin repeat-containing domain (InterPro:IPR020683), BAR (InterPro:IPR004148), Pleckstrin homology (InterPro:IPR001849), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 4 (TAIR:AT1G10870.1); Has 22643 Blast hits to 15173 proteins in 641 species: Archae - 75; Bacteria - 1664; Metazoa - 11505; Fungi - 2316; Plants - 1355; Viruses - 192; Other Eukaryotes - 5536 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0050790
IEA
GOA Databaseregulation of catalytic activity

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0005096
IEA
GOA DatabaseGTPase activator activity
GO:0005096
IEA
InterProGTPase activator activity
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
Gene Ontologycytoplasm
GO:0005737
IEA
InterProcytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR020683 Ankyrin repeat-containing domain
IPR036770 Ankyrin repeat-containing domain superfamily
IPR001164 Arf GTPase activating protein
IPR004148 BAR domain
IPR011993 PH-like domain superfamily
IPR002110 Ankyrin repeat
IPR038508 ArfGAP domain superfamily
IPR001849 Pleckstrin homology domain
IPR035670 Plant AGD1/2/3/4, BAR domain
IPR027267 AH/BAR domain superfamily
IPR037278 ARFGAP/RecO-like zinc finger
Mapman id Description
22.3.2.3.1 Vesicle trafficking.post-Golgi trafficking.coat protein recruiting.ARF-GTPase activation.class I ARF-GAP protein