Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Thhalv10004208m.g PTHR11588//PTHR11588:SF114 - TUBULIN // SUBFAMILY NOT NAMED scaffold_6 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G17480 LG-4 + View
Acer truncatum Atru.chr1.448 chr1 - View
Arabidopsis lyrata AL6G35120 scaffold_6 + View
Avicennia marina MSTRG.86 ScioBoG_102831_HRSCAF_103044 - View
Avicennia marina MSTRG.8460 ScioBoG_102841_HRSCAF_103114 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.6RPN1M PTHR11588//PTHR11588:SF114 - TUBULIN // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.19 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.X7UXQY PTHR11588//PTHR11588:SF114 - TUBULIN // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.05 + View
Arabidopsis thaliana AT5G23860 tubulin beta 8 beta-tubulin%2C preferentially expressed in endodermal and phloem cells of primary roots and in the vascular tissues of leaves%2C stems%2C and flowers. tubulin beta 8 (TUB8)%3B FUNCTIONS IN: protein binding%2C structural constituent of cytoskeleton%3B INVOLVED IN: microtubule-based process%2C response to cyclopentenone%2C response to salt stress%2C response to cold%3B LOCATED IN: tubulin complex%2C membrane%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Beta tubulin (InterPro:IPR002453)%2C Tubulin (InterPro:IPR000217)%2C Tubulin/FtsZ%2C GTPase domain (InterPro:IPR003008)%2C Tubulin/FtsZ%2C N-terminal (InterPro:IPR019746)%2C Tubulin/FtsZ%2C C-terminal (InterPro:IPR008280)%2C Beta tubulin%2C autoregulation binding site (InterPro:IPR013838)%2C Tubulin%2C conserved site (InterPro:IPR017975)%2C Tubulin/FtsZ%2C 2-layer sandwich domain (InterPro:IPR018316)%3B BEST Arabidopsis thaliana protein match is: tubulin beta chain 3 (TAIR:AT5G62700.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr5 + View
Brassica carinata BcaNung01840 Contig630 - View
Brassica napus A06p34670 A06 + View
Brassica napus C07p43820 C07 - View
Brassica oleracea BolC7t44911H C7 - View
Brassica rapa BraA06t26394Z A06 + View
Cicer arietinum L. Ca_10756_v3 Ca_LG4_v3 - View
Coffea canephora Cc02_g02870 Tubulin beta-1 chain chr2 - View
Citrus clementina Ciclev10004755m.g scaffold_9 + View
Carpinus fangiana Cfa012157 Cfa05 - View
Cardamine hirsuta CARHR189700 Tubulin beta chain, putative Chr6 - View
Carya illinoinensis CiPaw.03G107100 PTHR11588//PTHR11588:SF114 - TUBULIN // SUBFAMILY NOT NAMED Chr03 + View
Capsella rubella Carub.0006s2158 PTHR11588//PTHR11588:SF114 - TUBULIN // SUBFAMILY NOT NAMED scaffold_6 + View
Durio zibethinus Duzib205G1383 NW_019168381.1 + View
Durio zibethinus Duzib084G0394 NW_019167827.1 - View
Erigeron canadensis ECA232G4214 Conyza_canadensis_scaffold:2 - View
Eucalyptus grandis Eucgr.K00264 Chr11 + View
Erythranthe guttata Migut.F01114 scaffold_6 - View
Fragaria x ananassa FAN10G0403 PTHR11588//PTHR11588:SF114 - TUBULIN // SUBFAMILY NOT NAMED Fvb7-1 + View
Fragaria x ananassa FAN06G0034 PTHR11588//PTHR11588:SF114 - TUBULIN // SUBFAMILY NOT NAMED Fvb7-2 + View
Glycine max Glyma.20G159200 PTHR11588//PTHR11588:SF114 - TUBULIN // SUBFAMILY NOT NAMED Gm20 + View
Glycine max Glyma.10G235100 PTHR11588//PTHR11588:SF114//PTHR11588:SF122 - TUBULIN // SUBFAMILY NOT NAMED // SUBFAMILY NOT NAMED Gm10 - View
Helianthus annuus HanXRQChr09g0253681 Probable tubulin beta-1 chain HanXRQChr09 + View
Lupinus albus Lalb_Chr02g0141071 PTHR11588//PTHR11588:SF114 - TUBULIN // SUBFAMILY NOT NAMED Lalb_Chr02 + View
Lupinus albus Lalb_Chr19g0130801 PTHR11588//PTHR11588:SF114 - TUBULIN // SUBFAMILY NOT NAMED Lalb_Chr19 - View
Lupinus albus Lalb_Chr06g0161151 PTHR11588//PTHR11588:SF114 - TUBULIN // SUBFAMILY NOT NAMED Lalb_Chr06 + View
Lotus japonicus Lj5g0007545 PTHR11588//PTHR11588:SF114 - TUBULIN // SUBFAMILY NOT NAMED chr5 + View
Lactuca sativa Lsat_1_v5_gn_5_111360 PTHR11588//PTHR11588:SF114 - TUBULIN // SUBFAMILY NOT NAMED Lsat_1_v8_lg_9 + View
Malus domestica MD07G1270800 tubulin beta 8 Chr07 + View
Manihot esculenta Manes.06G147900 Chromosome06 + View
Medicago truncatula Medtr1g101130 tubulin beta-1 chain chr1 - View
Petunia axillaris Peaxi162Scf00444g00857 tubulin beta chain 2 Peaxi162Scf00444 - View
Punica granatum PGR142G3538 NC_045128.1 - View
Prunus persica Prupe.2G295200 PTHR11588//PTHR11588:SF114 - TUBULIN // SUBFAMILY NOT NAMED Pp02 + View
Phaseolus vulgaris Phvul.007G070800 PTHR11588//PTHR11588:SF114 - TUBULIN // SUBFAMILY NOT NAMED Chr07 + View
Quercus lobata QL09p014002 9 - View
Rosa chinensis RcHm_v2.0_Chr1g0377541 RcHm_v2.0_Chr1 + View
Rhododendron simsii Rhsim03G0186300 chr03 + View
Solanum lycopersicum Solyc03g025730.3 Tubulin beta chain (AHRD V3.3 *** A0A1U8FRZ9_CAPAN) SL4.0ch03 - View
Schrenkiella parvula Sp2g23430 PTHR11588//PTHR11588:SF114 - TUBULIN // SUBFAMILY NOT NAMED ch2-4 - View
Solanum pennellii Sopen03g004550 beta-tubulin, preferentially expressed in endodermal and phloem cells of primary roots and in the vascular tissues of leaves, stems, and flowers. | tubulin beta 8 (TUB8) | CONTAINS InterPro DOMAIN/s: Beta tubulin , Tubulin , Tubulin/FtsZ, GTPase domain , Tubulin/FtsZ, N-terminal , Tubulin/FtsZ, C-terminal , Beta tubulin, autoregulation binding site , Tubulin, conserved site , Tubulin/FtsZ, 2-layer sandwich domain | BEST Arabidopsis thaliana protein match is: tubulin beta chain 3 ., Tubulin beta-2 chain (Beta-2 tubulin) - Oryza sativa (Rice), Tubulin/FtsZ, GTPase domain Spenn-ch03 - View
Solanum tuberosum PGSC0003DMG400014296 Tubulin beta-1 chain ST4.03ch03 + View
Trochodendron aralioides TAR629G0627 group0 + View
Theobroma cacao Thecc.03G177700 Tubulin beta 8 Chromosome_3 + View
Tarenaya hassleriana THA.LOC104821546 tubulin beta-8 chain-like NW_010966459.1 + View
Trifolium pratense TPR.G26979 Tp57577_TGAC_v2_LG1 - View
Vaccinium macrocarpon vmacro06672 Similar to TUBB8: Tubulin beta-8 chain (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 - View
Vitis vinifera GSVIVG01028948001 chr16 + View