Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Aethionema arabicum | Aa31LG5G8810 | LG-5 | - | View | |
Acer truncatum | Atru.chr3.3238 | chr3 | - | View | |
Arabidopsis lyrata | AL4G21460 | scaffold_4 | - | View | |
Avicennia marina | MSTRG.18760 | ScioBoG_22153_HRSCAF_22259 | - | View | |
Amaranthus hybridus | Ah.15g095860 | DNA polymerase epsilon subunit 3 (DNA polymerase II subunit 3) (DNA polymerase epsilon subunit p17) | AmaHy_arrow1_Scaffold_15 | + | View |
Aquilegia oxysepala | Aqoxy4G02766 | CHR04 | - | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.UG6V14 | K02326 - DNA polymerase epsilon subunit 3 (POLE3) | arahy.Tifrunner.gnm1.Arahy.03 | - | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.I7PXCJ | K02326 - DNA polymerase epsilon subunit 3 (POLE3) | arahy.Tifrunner.gnm1.Arahy.13 | - | View |
Arabidopsis thaliana | AT2G27470 | nuclear factor Y, subunit B11 nuclear factor Y%2C subunit B11 (NF-YB11)%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: intracellular%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958)%2C Histone-fold (InterPro:IPR009072)%3B BEST Arabidopsis thaliana protein match is: nuclear factor Y%2C subunit B1 (TAIR:AT2G38880.7)%3B Has 148542 Blast hits to 60498 proteins in 2540 species: Archae - 708%3B Bacteria - 15552%3B Metazoa - 38569%3B Fungi - 16830%3B Plants - 7103%3B Viruses - 1761%3B Other Eukaryotes - 68019 (source: NCBI BLink). | Chr2 | - | View |
Brassica carinata | BcaB02g10091 | ChrB02 | - | View | |
Brassica carinata | BcaC02g10878 | ChrC02 | - | View | |
Brassica napus | A07p18230 | A07 | - | View | |
Brassica oleracea | BolC4t23910H | C4 | + | View | |
Brassica rapa | BraA07t29539Z | A07 | - | View | |
Beta vulgaris | EL10Ac7g15828 | K02326 - DNA polymerase epsilon subunit 3 (POLE3) | Chr7_EL10_PGA_scaffold5 | + | View |
Camellia sinensis var. sinensis | CSS0034800 | PREDICTED: DNA polymerase epsilon subunit 3 [Nelumbo nucifera] | Chr11 | + | View |
Capsicum annuum | CAN.G1524.3 | PGAv.1.6.scaffold1524 | + | View | |
Cicer arietinum L. | Ca_19409_v3 | Ca_LG6_v3 | + | View | |
Corylus avellana | Haze_23370 | Similar to NFYB3: Nuclear transcription factor Y subunit B-3 (Arabidopsis thaliana OX%3D3702) | 6 | - | View |
Coffea canephora | Cc01_g09080 | Putative uncharacterized protein | chr1 | - | View |
Citrus clementina | Ciclev10029525m.g | scaffold_8 | - | View | |
Ceratophyllum demersum | CDE08G1389 | 6 | + | View | |
Carpinus fangiana | Cfa010012 | Cfa04 | - | View | |
Cardamine hirsuta | CARHR120120 | nuclear factor Y, subunit B2 | Chr4 | - | View |
Carya illinoinensis | CiPaw.14G099800 | K02326 - DNA polymerase epsilon subunit 3 (POLE3) | Chr14 | - | View |
Chenopodium quinoa | AUR62009752 | Protein of unknown function | C_Quinoa_Scaffold_2493 | - | View |
Capsella rubella | Carub.0004s0810 | K02326 - DNA polymerase epsilon subunit 3 (POLE3) | scaffold_4 | - | View |
Daucus carota | DCAR_006164 | hypothetical protein | DCARv2_Chr2 | + | View |
Daucus carota | DCAR_010346 | hypothetical protein | DCARv2_Chr3 | - | View |
Durio zibethinus | Duzib168G1184 | NW_019168159.1 | + | View | |
Erigeron canadensis | ECA238G3612 | Conyza_canadensis_scaffold:6 | - | View | |
Eucalyptus grandis | Eucgr.J00499 | Chr10 | + | View | |
Erythranthe guttata | Migut.D02442 | scaffold_4 | + | View | |
Eutrema salsugineum | Thhalv10017865m.g | K02326 - DNA polymerase epsilon subunit 3 (POLE3) | scaffold_10 | - | View |
Fragaria x ananassa | FAN21G1301 | K02326 - DNA polymerase epsilon subunit 3 (POLE3) | Fvb3-2 | + | View |
Fragaria x ananassa | FAN25G3607 | 2.7.7.7 - DNA-directed DNA polymerase / DNA-dependent DNA polymerase | Fvb3-1 | + | View |
Fragaria x ananassa | FAN11G3713 | 2.7.7.7 - DNA-directed DNA polymerase / DNA-dependent DNA polymerase | Fvb3-4 | - | View |
Fragaria x ananassa | FAN16G2085 | 2.7.7.7 - DNA-directed DNA polymerase / DNA-dependent DNA polymerase | Fvb3-3 | + | View |
Fragaria vesca | FvH4_3g24950 | K02326 - DNA polymerase epsilon subunit 3 (POLE3) | Fvb3 | + | View |
Gossypium hirsutum | Gohir.A05G080500 | K02326 - DNA polymerase epsilon subunit 3 (POLE3) | A05 | - | View |
Gossypium hirsutum | Gohir.D05G083500 | K02326 - DNA polymerase epsilon subunit 3 (POLE3) | D05 | - | View |
Glycine max | Glyma.12G089400 | K02326 - DNA polymerase epsilon subunit 3 (POLE3) | Gm12 | + | View |
Glycine max | Glyma.11G183100 | K02326 - DNA polymerase epsilon subunit 3 (POLE3) | Gm11 | - | View |
Gossypium raimondii | Gorai.009G085200 | Chr09 | - | View | |
Lupinus albus | Lalb_Chr19g0136451 | K02326 - DNA polymerase epsilon subunit 3 (POLE3) | Lalb_Chr19 | - | View |
Lupinus albus | Lalb_Chr03g0028111 | Lalb_Chr03 | + | View | |
Lotus japonicus | Lj3g0014332 | K02326 - DNA polymerase epsilon subunit 3 (POLE3) | chr3 | + | View |
Lonicera japonica | Lj2A964T5 | GWHAAZE00000002 | + | View | |
Magnolia biondii | MBI17_g08336_MAGBIO | AED:0.47 | Chr17 | - | View |
Malus domestica | MD11G1164600 | nuclear factor Y | Chr11 | + | View |
Manihot esculenta | Manes.11G162100 | Chromosome11 | + | View | |
Medicago truncatula | Medtr4g052950 | class 2 transcription repressor NC2, beta subunit | chr4 | - | View |
Nicotiana tabacum | Nitab4.5_0000755g0110 | Transcription factor CBF/NF-Y/archaeal histone, Histone-fold | Nitab4.5_0000755 | - | View |
Olea europaea | Oeu031474.1 | scaffold261 | - | View | |
Petunia axillaris | Peaxi162Scf00040g00018 | nuclear factor Y, subunit B11 | Peaxi162Scf00040 | + | View |
Punica granatum | PGR119G2179 | NC_045132.1 | - | View | |
Prunus persica | Prupe.6G130500 | K02326 - DNA polymerase epsilon subunit 3 (POLE3) | Pp06 | + | View |
Pisum sativum | Psat7g187880 | Histone-like transcription factor (CBF/NF-Y) and archaeal histone | chr7LG7 | - | View |
Papaver somniferum | PSO339G4282 | NC_039366.1 | - | View | |
Papaver somniferum | PSO384G2857 | NC_039368.1 | + | View | |
Populus trichocarpa | Potri.009G163500 | K02326 - DNA polymerase epsilon subunit 3 (POLE3) | Chr09 | - | View |
Populus trichocarpa | Potri.004G202050 | Chr04 | - | View | |
Phaseolus vulgaris | Phvul.011G094600 | K02326 - DNA polymerase epsilon subunit 3 (POLE3) | Chr11 | + | View |
Quercus lobata | QL01p012190 | 1 | - | View | |
Rosa chinensis | RcHm_v2.0_Chr5g0044741 | RcHm_v2.0_Chr5 | + | View | |
Rhododendron simsii | Rhsim13G0112100 | chr13 | - | View | |
Striga asiatica | SGA_v2.0_scaffold22G09859 | scaffold22 | + | View | |
Salix brachista | Sabra09G0127600 | GWHAAZH00000009 | - | View | |
Simmondsia chinensis | Sc12g0004540 | GWHAASQ00000012 | + | View | |
Schrenkiella parvula | Sp4g10260 | K02326 - DNA polymerase epsilon subunit 3 (POLE3) | ch4-6 | - | View |
Solanum pennellii | Sopen11g027190 | nuclear factor Y, subunit B11 (NF-YB11) | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription | LOCATED IN: intracellular | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone , Histone-fold | BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B1 | Spenn-ch11 | + | View |
Solanum tuberosum | PGSC0003DMG400026357 | DNA polymerase epsilon P17 subunit | ST4.03ch11 | + | View |
Selenicereus undatus | Hund18759 | Scaffold_33675 | + | View | |
Trochodendron aralioides | TAR636G3315 | group1 | + | View | |
Theobroma cacao | Thecc.09G282700 | Nuclear factor Y | Chromosome_9 | - | View |
Tarenaya hassleriana | THA.LOC104826426 | DNA polymerase epsilon subunit 3 | NW_010967707.1 | + | View |
Trifolium pratense | TPR.G17231 | Tp57577_TGAC_v2_LG4 | - | View | |
Tripterygium wilfordii | TWI31G0153 | NC_052233.1 | - | View | |
Vaccinium macrocarpon | vmacro03320 | Similar to POLE3: DNA polymerase epsilon subunit 3 (Pongo abelii OX%3D9601) | chr9_Vaccinium_macrocarpon_Stevens_v1 | - | View |
Vigna mungo | VMungo1127G0544 | CM024076.1 | - | View | |
Vitis vinifera | GSVIVG01036120001 | chr6 | + | View |