Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Solyc06g074300.4 Ribosomal protein (AHRD V3.3 *** V4KXL5_EUTSA) SL4.0ch06 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G8350 LG-5 + View
Aethionema arabicum Aa31LG1G13120 LG-1 + View
Acer truncatum Atru.chr8.1541 chr8 - View
Acer truncatum Atru.chr3.3243 chr3 - View
Actinidia chinensis Actinidia07249 Lachesis_group13 + View
Actinidia chinensis Actinidia24216 Lachesis_group24 + View
Actinidia chinensis Actinidia05432 Lachesis_group5 + View
Arabidopsis lyrata AL6G33460 scaffold_6 - View
Arabidopsis lyrata AL1G18770 scaffold_1 + View
Avicennia marina MSTRG.21043 ScioBoG_26769_HRSCAF_26899 - View
Avicennia marina MSTRG.17707 ScioBoG_19834_HRSCAF_19925 - View
Aquilegia oxysepala Aqoxy4G02779 CHR04 - View
Arabidopsis thaliana AT1G08360 Ribosomal protein L1p/L10e family Ribosomal protein L1p/L10e family%3B FUNCTIONS IN: structural constituent of ribosome%2C RNA binding%3B INVOLVED IN: translation%2C RNA processing%3B LOCATED IN: cytosolic ribosome%2C ribosome%2C cytosolic large ribosomal subunit%2C plasma membrane%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143)%2C Ribosomal protein L1%2C 2-layer alpha/beta-sandwich (InterPro:IPR016094)%3B BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT2G27530.2)%3B Has 3821 Blast hits to 3820 proteins in 1247 species: Archae - 280%3B Bacteria - 1757%3B Metazoa - 462%3B Fungi - 186%3B Plants - 511%3B Viruses - 0%3B Other Eukaryotes - 625 (source: NCBI BLink). Chr1 + View
Arabidopsis thaliana AT2G27530 Ribosomal protein L1p/L10e family Encodes ribosomal protein L10aP. Identified in a screen for enhancers of as1. as1/pgy double mutants show defects in leaf vascular patterning and adaxial cell fate. Double mutant analysis indicates pgy genes function in the same pathway as REV%2C KAN1 and KAN2. PIGGYBACK1 (PGY1)%3B FUNCTIONS IN: structural constituent of ribosome%2C RNA binding%3B INVOLVED IN: adaxial/abaxial pattern formation%2C post-embryonic organ development%2C translation%3B LOCATED IN: cytosolic ribosome%2C cytosolic large ribosomal subunit%2C large ribosomal subunit%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143)%2C Ribosomal protein L1%2C 2-layer alpha/beta-sandwich (InterPro:IPR016094)%3B BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT1G08360.1)%3B Has 3883 Blast hits to 3882 proteins in 1276 species: Archae - 280%3B Bacteria - 1809%3B Metazoa - 457%3B Fungi - 188%3B Plants - 511%3B Viruses - 0%3B Other Eukaryotes - 638 (source: NCBI BLink). Chr2 - View
Arabidopsis thaliana AT5G22440 Ribosomal protein L1p/L10e family Ribosomal protein L1p/L10e family%3B FUNCTIONS IN: structural constituent of ribosome%2C RNA binding%3B INVOLVED IN: translation%2C RNA processing%3B LOCATED IN: cytosolic ribosome%2C ribosome%2C cytosolic large ribosomal subunit%2C nucleolus%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143)%2C Ribosomal protein L1%2C 2-layer alpha/beta-sandwich (InterPro:IPR016094)%3B BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT1G08360.1)%3B Has 4875 Blast hits to 4874 proteins in 1649 species: Archae - 280%3B Bacteria - 2611%3B Metazoa - 459%3B Fungi - 187%3B Plants - 522%3B Viruses - 0%3B Other Eukaryotes - 816 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaC04g19573 ChrC04 - View
Brassica carinata BcaC02g10887 ChrC02 - View
Brassica carinata BcaB08g36431 ChrB08 + View
Brassica carinata BcaB07g34082 ChrB07 + View
Brassica carinata BcaB05g22725 ChrB05 + View
Brassica carinata BcaC03g13884 ChrC03 - View
Brassica carinata BcaB02g10094 ChrB02 - View
Brassica napus A07p18270 A07 - View
Brassica napus C04p56780 C04 - View
Brassica napus A04p21000 A04 - View
Brassica napus A10p18390 A10 + View
Brassica napus C09p54150 C09 + View
Brassica napus A06p05380 A06 + View
Brassica oleracea BolC5t29411H C5 + View
Brassica oleracea BolC4t23902H C4 + View
Brassica oleracea BolC9t58286H C9 + View
Brassica rapa BraA07t29543Z A07 - View
Brassica rapa BraA04t17668Z A04 - View
Brassica rapa BraA10t43920Z A10 + View
Brassica rapa BraA06t23747Z A06 + View
Beta vulgaris EL10Ac7g15821 K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A) Chr7_EL10_PGA_scaffold5 + View
Camellia sinensis var. sinensis CSS0048475 PREDICTED: 60S ribosomal protein L10a-2 [Phoenix dactylifera] Chr11 - View
Camellia sinensis var. sinensis CSS0045962 PREDICTED: 60S ribosomal protein L10a-2 [Phoenix dactylifera] Chr13 + View
Capsicum annuum CAN.G1358.11 PGAv.1.6.scaffold1358 - View
Cicer arietinum L. Ca_01660_v3 Ca_LG1_v3 - View
Corylus avellana Haze_23375 Similar to RPL10A: 60S ribosomal protein L10a (Oryza sativa subsp. indica OX%3D39946) 6 - View
Corylus avellana Haze_19609 Similar to RPL10A: 60S ribosomal protein L10a (Oryza sativa subsp. indica OX%3D39946) 10 + View
Coffea canephora Cc06_g05730 60S ribosomal protein L10a chr6 + View
Citrus clementina Ciclev10013748m.g scaffold_6 - View
Citrus clementina Ciclev10030134m.g scaffold_8 - View
Cardamine hirsuta CARHR120180 Ribosomal protein Chr4 - View
Carya illinoinensis CiPaw.14G100100 PTHR23105//PTHR23105:SF48 - RIBOSOMAL PROTEIN L7AE FAMILY MEMBER // 60S RIBOSOMAL PROTEIN L10A-1-RELATED Chr14 - View
Carya illinoinensis CiPaw.10G009600 PTHR23105//PTHR23105:SF48 - RIBOSOMAL PROTEIN L7AE FAMILY MEMBER // 60S RIBOSOMAL PROTEIN L10A-1-RELATED Chr10 + View
Carya illinoinensis CiPaw.13G135900 PTHR23105//PTHR23105:SF55 - RIBOSOMAL PROTEIN L7AE FAMILY MEMBER // SUBFAMILY NOT NAMED Chr13 - View
Carya illinoinensis CiPaw.09G013800 PTHR23105//PTHR23105:SF55 - RIBOSOMAL PROTEIN L7AE FAMILY MEMBER // SUBFAMILY NOT NAMED Chr09 + View
Citrullus lanatus ClCG01G012240 Ribosomal protein CG_Chr01 - View
Cucumis melo MELO3C004713.2 Ribosomal protein chr12 + View
Cucumis melo MELO3C021429.2 Ribosomal protein chr11 - View
Chenopodium quinoa AUR62036184 RPL10A: 60S ribosomal protein L10a C_Quinoa_Scaffold_2528 + View
Chenopodium quinoa AUR62028544 RPL10A: 60S ribosomal protein L10a C_Quinoa_Scaffold_3100 - View
Chenopodium quinoa AUR62009759 RPL10A: 60S ribosomal protein L10a C_Quinoa_Scaffold_2493 - View
Capsella rubella Carub.0004s0819 K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A) scaffold_4 - View
Capsella rubella Carub.0006s2018 PTHR23105:SF48 - 60S RIBOSOMAL PROTEIN L10A-1-RELATED scaffold_6 - View
Cucumis sativus L. CsaV3_1G014820 Ribosomal protein chr1 + View
Cucumis sativus L. CsaV3_6G014960 Ribosomal protein chr6 - View
Daucus carota DCAR_013384 hypothetical protein DCARv2_Chr4 - View
Daucus carota DCAR_012193 hypothetical protein DCARv2_Chr3 + View
Davidia involucrata Dinv42554 GWHABJS00000170 - View
Davidia involucrata Dinv29486 GWHABJS00000007 - View
Davidia involucrata Dinv31685 GWHABJS00000015 + View
Davidia involucrata Dinv21210 GWHABJS00000021 - View
Durio zibethinus Duzib170G0906 NW_019167871.1 - View
Durio zibethinus Duzib168G0277 NW_019168159.1 + View
Erigeron canadensis ECA238G3727 Conyza_canadensis_scaffold:6 - View
Eucalyptus grandis Eucgr.J00492 Chr10 + View
Eucalyptus grandis Eucgr.B03850 Chr02 - View
Erythranthe guttata Migut.D02448 scaffold_4 - View
Eutrema salsugineum Thhalv10008751m.g K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A) scaffold_5 - View
Eutrema salsugineum Thhalv10014639m.g K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A) scaffold_2 - View
Fragaria x ananassa FAN11G3377 K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A) Fvb3-4 - View
Fragaria x ananassa FAN16G1083 K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A) Fvb3-3 + View
Fragaria x ananassa FAN25G1472 PTHR23105:SF48 - 60S RIBOSOMAL PROTEIN L10A-1-RELATED Fvb3-1 + View
Fragaria x ananassa FAN21G3513 K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A) Fvb3-2 + View
Fragaria vesca FvH4_3g24900 K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A) Fvb3 + View
Gossypium hirsutum Gohir.A09G095600 K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A) A09 + View
Gossypium hirsutum Gohir.D05G083900 K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A) D05 - View
Gossypium hirsutum Gohir.D09G095300 K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A) D09 + View
Gossypium hirsutum Gohir.A05G080800 K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A) A05 - View
Glycine max Glyma.13G316400 K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A) Gm13 - View
Glycine max Glyma.12G184900 K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A) Gm12 + View
Glycine max Glyma.19G194922 K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A) Gm19 + View
Gossypium raimondii Gorai.009G085600 Chr09 - View
Gossypium raimondii Gorai.006G112000 Chr06 + View
Helianthus annuus HanXRQChr11g0346811 Putative ribosomal protein L1; Ribosomal protein L1, conserved site; Ribosomal protein L1-like; Ribosomal protein L1/ribosomal biogenesis protein HanXRQChr11 + View
Helianthus annuus HanXRQChr14g0451591 Putative ribosomal protein L1, 2-layer alpha/beta-sandwich; Ribosomal protein L1, conserved site; Ribosomal protein L1-like; Ribosomal protein L1/ribosomal biogenesis protein HanXRQChr14 - View
Hydrangea macrophylla Hma1.2p1_0578F.1_g182510 Hma1.2p1_0578F.1 + View
Lupinus albus Lalb_Chr00c36g0408701 K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A) Lalb_Chr00c36 + View
Lotus japonicus Lj3g0025857 K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A) chr3 - View
Lonicera japonica Lj1C237T1 GWHAAZE00000001 - View
Lonicera japonica Lj2A963G27 GWHAAZE00000002 + View
Lactuca sativa Lsat_1_v5_gn_1_59281 PTHR23105:SF48 - 60S RIBOSOMAL PROTEIN L10A-1-RELATED Lsat_1_v8_lg_1 - View
Lactuca sativa Lsat_1_v5_gn_2_95040 K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A) Lsat_1_v8_lg_2 - View
Malus domestica MD03G1143900 Ribosomal protein L1p/L10e family Chr03 + View
Malus domestica MD14G1022900 Ribosomal protein L1p/L10e family Chr14 + View
Manihot esculenta Manes.11G161800 Chromosome11 + View
Manihot esculenta Manes.04G003500 Chromosome04 - View
Medicago truncatula Medtr2g086500 ribosomal protein L1p/L10e family protein chr2 + View
Nicotiana tabacum Nitab4.5_0000755g0150 Ribosomal protein L1/ribosomal biogenesis protein, Ribosomal protein L1, 3-layer alpha/beta-sandwich, Ribosomal protein L1, 2-layer alpha/beta-sandwich, Ribosomal protein L1, Ribosomal protein L1-like Nitab4.5_0000755 - View
Olea europaea Oeu035552.1 chr11 + View
Olea europaea Oeu031483.1 scaffold261 - View
Petunia axillaris Peaxi162Scf00003g00059 60S ribosomal protein L10a-1 Peaxi162Scf00003 - View
Punica granatum PGR119G2280 NC_045132.1 - View
Prunus persica Prupe.7G110300 PTHR23105:SF48 - 60S RIBOSOMAL PROTEIN L10A-1-RELATED Pp07 - View
Prunus persica Prupe.6G129700 K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A) Pp06 + View
Pisum sativum Psat5g257440 Ribosomal protein L1p/L10e family chr5LG3 + View
Papaver somniferum PSO384G4052 NC_039368.1 - View
Papaver somniferum PSO384G2780 NC_039368.1 - View
Papaver somniferum PSO339G3991 NC_039366.1 - View
Phaseolus vulgaris Phvul.005G123700 K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A) Chr05 - View
Quercus lobata QL07p039040 7 - View
Quercus lobata QL01p012272 1 - View
Rhododendron simsii Rhsim13G0111500 chr13 + View
Rhododendron simsii Rhsim03G0075300 chr03 - View
Striga asiatica SGA_v2.0_scaffold147G36373 scaffold147 + View
Striga asiatica SGA_v2.0_scaffold22G09865 scaffold22 - View
Salvia bowleyana SalBow6G3327 GWHASIU00000002 - View
Salix brachista Sabra04G0137000 GWHAAZH00000004 - View
Simmondsia chinensis Sc06g0008810 GWHAASQ00000006 - View
Simmondsia chinensis Sc12g0004510 GWHAASQ00000012 + View
Sechium edule Sed0022483 LG01 - View
Sechium edule Sed0004123 LG11 - View
Schrenkiella parvula Sp4g10330 K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A) ch4-6 - View
Schrenkiella parvula Sp1g07000 K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A) ch1-1 + View
Schrenkiella parvula Sp6g22810 K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A) ch6-6 + View
Solanum pennellii Sopen06g030750 Ribosomal protein L1p/L10e family | FUNCTIONS IN: structural constituent of ribosome, RNA binding | INVOLVED IN: translation, RNA processing | LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 , Ribosomal protein L1, 2-layer alpha/beta-sandwich | BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family Spenn-ch06 - View
Solanum pennellii Sopen11g027130 Ribosomal protein L1p/L10e family | FUNCTIONS IN: structural constituent of ribosome, RNA binding | INVOLVED IN: translation, RNA processing | LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 , Ribosomal protein L1, 2-layer alpha/beta-sandwich | BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family Spenn-ch11 + View
Solanum tuberosum PGSC0003DMG400026361 Ribosomal protein ST4.03ch11 + View
Solanum tuberosum PGSC0003DMG401005881 Ribosomal protein L10a ST4.03ch06 - View
Selenicereus undatus Hund18756 Scaffold_33675 + View
Selenicereus undatus Hund20902 Scaffold_33673 + View
Trochodendron aralioides TAR633G1113 group2 - View
Trochodendron aralioides TAR369G1124 group18 + View
Trochodendron aralioides TAR636G2278 group1 + View
Theobroma cacao Thecc.09G283800 Ribosomal protein Chromosome_9 - View
Theobroma cacao Thecc.05G088900 Ribosomal protein Chromosome_5 + View
Tarenaya hassleriana THA.LOC104800530 60S ribosomal protein L10a-2-like NW_010969548.1 - View
Tarenaya hassleriana THA.LOC104826424 60S ribosomal protein L10a-2 NW_010967707.1 + View
Tarenaya hassleriana THA.LOC104814788 60S ribosomal protein L10a-3 NW_010965541.1 - View
Trifolium pratense TPR.G4466 Tp57577_TGAC_v2_LG7 - View
Tripterygium wilfordii TWI31G1268 NC_052233.1 - View
Tripterygium wilfordii TWI79G1543 NC_052238.1 + View
Vaccinium macrocarpon vmacro07407 Similar to RPL10A: 60S ribosomal protein L10a (Oryza sativa subsp. japonica OX%3D39947) chr2_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro03317 Similar to RPL10AA: 60S ribosomal protein L10a-1 (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1080G0696 CM024079.1 + View
Vitis vinifera GSVIVG01033841001 chr8 - View
Vitis vinifera GSVIVG01036128001 chr6 + View