Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Aethionema arabicum | Aa31LG3G14780 | LG-3 | + | View | |
Acer truncatum | Atru.chr3.2676 | chr3 | - | View | |
Actinidia chinensis | Actinidia23977 | Lachesis_group9 | - | View | |
Actinidia chinensis | Actinidia11674 | Lachesis_group25 | + | View | |
Arabidopsis lyrata | AL6G23370 | scaffold_6 | - | View | |
Amaranthus hybridus | Ah.06g193950 | AmaHy_arrow1_Scaffold_6 | - | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.KR6Y3F | PF11891 - Domain of unknown function (DUF3411) (DUF3411) | arahy.Tifrunner.gnm1.Arahy.03 | - | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.GHX3DH | PF11891 - Domain of unknown function (DUF3411) (DUF3411) | arahy.Tifrunner.gnm1.Arahy.13 | - | View |
Arabidopsis thaliana | AT5G12470 | UvrABC system C protein, putative (DUF3411) Protein of unknown function (DUF3411)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: mitochondrion%2C chloroplast%2C plastid%2C chloroplast inner membrane%2C chloroplast envelope%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3411 (InterPro:IPR021825)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF399 and DUF3411) (TAIR:AT2G40400.2)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). | Chr5 | - | View |
Brassica carinata | BcaB08g37009 | ChrB08 | - | View | |
Brassica napus | A10p25330 | A10 | + | View | |
Brassica napus | C09p64340 | C09 | + | View | |
Brassica oleracea | BolC9t59272H | C9 | + | View | |
Brassica rapa | BraA10t44596Z | A10 | + | View | |
Camellia sinensis var. sinensis | CSS0007575 | hypothetical protein PHAVU_011G011000g [Phaseolus vulgaris] | Chr11 | - | View |
Cicer arietinum L. | Ca_18971_v3 | Ca_LG6_v3 | + | View | |
Corylus avellana | Haze_23160 | Similar to RER4: Protein RETICULATA-RELATED 4, chloroplastic (Arabidopsis thaliana OX%3D3702) | 6 | + | View |
Coffea canephora | Cc01_g04810 | Protein of unknown function (DUF3411) | chr1 | + | View |
Citrus clementina | Ciclev10015274m.g | scaffold_2 | + | View | |
Cardamine hirsuta | CARHR200630 | Protein of unknown function (DUF3411) | Chr6 | + | View |
Carya illinoinensis | CiPaw.14G117500 | PF11891 - Domain of unknown function (DUF3411) (DUF3411) | Chr14 | - | View |
Citrullus lanatus | ClCG02G023090 | Sorting nexin-1 | CG_Chr02 | - | View |
Carica papaya | Cpa.g.sc84.37 | supercontig_84 | - | View | |
Chenopodium quinoa | AUR62019325 | RER4: Protein RETICULATA-RELATED 4, chloroplastic | C_Quinoa_Scaffold_3107 | + | View |
Chenopodium quinoa | AUR62000144 | RER4: Protein RETICULATA-RELATED 4, chloroplastic | C_Quinoa_Scaffold_2088 | + | View |
Capsella rubella | Carub.0006s1101 | PF11891 - Domain of unknown function (DUF3411) (DUF3411) | scaffold_6 | - | View |
Davidia involucrata | Dinv22166 | GWHABJS00000003 | + | View | |
Davidia involucrata | Dinv36241 | GWHABJS00000007 | - | View | |
Durio zibethinus | Duzib150G1373 | NW_019167882.1 | - | View | |
Durio zibethinus | Duzib170G0982 | NW_019167871.1 | + | View | |
Erigeron canadensis | ECA233G4966 | Conyza_canadensis_scaffold:1 | - | View | |
Eucalyptus grandis | Eucgr.J00754 | Chr10 | - | View | |
Eucalyptus grandis | Eucgr.B03706 | Chr02 | + | View | |
Erythranthe guttata | Migut.N02329 | scaffold_14 | + | View | |
Erythranthe guttata | Migut.D00616 | scaffold_4 | + | View | |
Eutrema salsugineum | Thhalv10013804m.g | PF11891 - Domain of unknown function (DUF3411) (DUF3411) | scaffold_2 | - | View |
Fragaria x ananassa | FAN11G1496 | PF11891 - Domain of unknown function (DUF3411) (DUF3411) | Fvb3-4 | + | View |
Fragaria x ananassa | FAN21G2494 | PF11891 - Domain of unknown function (DUF3411) (DUF3411) | Fvb3-2 | - | View |
Fragaria vesca | FvH4_3g28550 | PF11891 - Domain of unknown function (DUF3411) (DUF3411) | Fvb3 | - | View |
Gossypium hirsutum | Gohir.A07G123400 | PF11891 - Domain of unknown function (DUF3411) (DUF3411) | A07 | - | View |
Gossypium hirsutum | Gohir.D13G220600 | PF11891 - Domain of unknown function (DUF3411) (DUF3411) | D13 | + | View |
Gossypium hirsutum | Gohir.A09G113200 | PF11891 - Domain of unknown function (DUF3411) (DUF3411) | A09 | - | View |
Gossypium hirsutum | Gohir.D09G109733 | PF11891 - Domain of unknown function (DUF3411) (DUF3411) | D09 | - | View |
Gossypium hirsutum | Gohir.A13G217000 | PF11891 - Domain of unknown function (DUF3411) (DUF3411) | A13 | + | View |
Glycine max | Glyma.11G093500 | PF11891 - Domain of unknown function (DUF3411) (DUF3411) | Gm11 | + | View |
Glycine max | Glyma.12G020000 | PF11891 - Domain of unknown function (DUF3411) (DUF3411) | Gm12 | + | View |
Gossypium raimondii | Gorai.013G251600 | Chr13 | + | View | |
Gossypium raimondii | Gorai.006G127400 | Chr06 | - | View | |
Helianthus annuus | HanXRQChr13g0401161 | Putative protein RETICULATA-related | HanXRQChr13 | + | View |
Lupinus albus | Lalb_Chr01g0001041 | PF11891 - Domain of unknown function (DUF3411) (DUF3411) | Lalb_Chr01 | + | View |
Lotus japonicus | Lj3g0014717 | PF11891 - Domain of unknown function (DUF3411) (DUF3411) | chr3 | + | View |
Lonicera japonica | Lj1C321T6 | GWHAAZE00000001 | - | View | |
Lonicera japonica | Lj2A627G31 | GWHAAZE00000002 | - | View | |
Lactuca sativa | Lsat_1_v5_gn_6_25640 | PF11891 - Domain of unknown function (DUF3411) (DUF3411) | Lsat_1_v8_lg_6 | - | View |
Malus domestica | MD11G1190600 | Protein of unknown function (DUF3411) | Chr11 | - | View |
Malus domestica | MD03G1172700 | Protein of unknown function (DUF3411) | Chr03 | - | View |
Manihot esculenta | Manes.06G162700 | Chromosome06 | - | View | |
Manihot esculenta | Manes.14G003866 | Chromosome14 | + | View | |
Medicago truncatula | Medtr4g077000 | DUF3411 domain protein | chr4 | - | View |
Olea europaea | Oeu025878.1 | chr16 | + | View | |
Petunia axillaris | Peaxi162Scf00004g02916 | Protein of unknown function (DUF399 and DUF3411) | Peaxi162Scf00004 | + | View |
Punica granatum | PGR031G1406 | NC_045127.1 | - | View | |
Punica granatum | PGR119G2500 | NC_045132.1 | + | View | |
Prunus persica | Prupe.4G253900 | PF11891 - Domain of unknown function (DUF3411) (DUF3411) | Pp04 | + | View |
Populus trichocarpa | Potri.009G051800 | PF11891 - Domain of unknown function (DUF3411) (DUF3411) | Chr09 | - | View |
Populus trichocarpa | Potri.001G256300 | PF11891 - Domain of unknown function (DUF3411) (DUF3411) | Chr01 | - | View |
Phaseolus vulgaris | Phvul.011G022600 | PF11891 - Domain of unknown function (DUF3411) (DUF3411) | Chr11 | + | View |
Quercus lobata | QL01p004255 | 1 | - | View | |
Rosa chinensis | RcHm_v2.0_Chr5g0052771 | RcHm_v2.0_Chr5 | + | View | |
Striga asiatica | SGA_v2.0_scaffold29G12336 | scaffold29 | - | View | |
Salix brachista | Sabra09G0038000 | GWHAAZH00000009 | - | View | |
Simmondsia chinensis | Sc09g0000800 | GWHAASQ00000009 | + | View | |
Sapria himalayana | SHI29794 | scaffold68_2605431 | + | View | |
Schrenkiella parvula | Sp6g31130 | PF11891 - Domain of unknown function (DUF3411) (DUF3411) | ch6-6 | + | View |
Solanum pennellii | Sopen11g025240 | Protein of unknown function (DUF3411) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: mitochondrion, chloroplast, plastid, chloroplast inner membrane, chloroplast envelope | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3411 | BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF399 and DUF3411) | Spenn-ch11 | - | View |
Solanum tuberosum | PGSC0003DMG400032528 | Conserved gene of unknown function | ST4.03ch11 | - | View |
Selenicereus undatus | Hund22009 | Scaffold_33680 | - | View | |
Theobroma cacao | Thecc.09G236900 | Uncharacterized protein | Chromosome_9 | + | View |
Tarenaya hassleriana | THA.LOC104799113 | protein RETICULATA-RELATED 4%2C chloroplastic-like | NW_010968505.1 | - | View |
Tarenaya hassleriana | THA.LOC104811302 | protein RETICULATA-RELATED 4%2C chloroplastic-like | NW_010965304.1 | + | View |
Tripterygium wilfordii | TWI60G0899 | NC_052246.1 | + | View | |
Utricularia gibba | unitig_27.g24996 | unitig_27 | + | View | |
Vigna mungo | VMungo1127G0237 | CM024076.1 | + | View | |
Vitis vinifera | GSVIVG01025237001 | chr6 | + | View |