Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG11G5260 LG-11 + View
Acer truncatum Atru.chr12.885 chr12 + View
Arabidopsis lyrata AL6G14000 scaffold_6 + View
Avicennia marina MSTRG.27497 ScioBoG_8578_HRSCAF_8617 - View
Aquilegia oxysepala Aqoxy1G01105 CHR01 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.KY2C4A 3.2.1.142 - Limit dextrinase / R-enzyme arahy.Tifrunner.gnm1.Arahy.19 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.MYE0E1 3.2.1.142 - Limit dextrinase / R-enzyme arahy.Tifrunner.gnm1.Arahy.09 - View
Arabidopsis thaliana AT5G04360 limit dextrinase Encodes an enzyme thought to be involved in the hydrolysis of the %26#945%3B-1%2C6 linkages during starch degradation in seed endosperm. However%2C a knockout mutant of Arabidopsis lacking limit dextrinase has normal rates of starch degradation in the leaf at night%2C indicating that more than one isoamylases might be involved in this process. limit dextrinase (LDA)%3B FUNCTIONS IN: limit dextrinase activity%2C pullulanase activity%2C alpha-amylase activity%3B INVOLVED IN: starch biosynthetic process%2C carbohydrate metabolic process%2C starch catabolic process%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Alpha-1%2C6-glucosidases%2C pullulanase-type (InterPro:IPR011839)%2C Immunoglobulin E-set (InterPro:IPR014756)%2C Glycoside hydrolase%2C family 13%2C N-terminal (InterPro:IPR004193)%2C Glycoside hydrolase%2C catalytic core (InterPro:IPR017853)%2C Glycoside hydrolase%2C subgroup%2C catalytic core (InterPro:IPR013781)%2C Glycosyl hydrolase%2C family 13%2C catalytic domain (InterPro:IPR006047)%3B BEST Arabidopsis thaliana protein match is: isoamylase 3 (TAIR:AT4G09020.1)%3B Has 6260 Blast hits to 6253 proteins in 1613 species: Archae - 73%3B Bacteria - 5462%3B Metazoa - 45%3B Fungi - 1%3B Plants - 262%3B Viruses - 0%3B Other Eukaryotes - 417 (source: NCBI BLink). Chr5 + View
Brassica carinata BcaC06g32141 ChrC06 + View
Brassica napus A10p31720 A10 - View
Brassica napus C09p72420 C09 - View
Brassica oleracea BolC9t59986H C9 - View
Brassica rapa BraA10t45218Z A10 - View
Capsicum annuum CAN.G459.26 PGAv.1.6.scaffold459 - View
Cicer arietinum L. Ca_10444_v3 Ca_LG4_v3 + View
Corylus avellana Haze_16761 Similar to PU1: Pullulanase 1, chloroplastic (Arabidopsis thaliana OX%3D3702) 11 + View
Coffea canephora Cc02_g10690 Pullulanase 1, chloroplastic chr2 - View
Citrus clementina Ciclev10031035m.g scaffold_4 + View
Carpinus fangiana Cfa001784 Cfa01 - View
Cardamine hirsuta CARHR208930 Pullulanase, putative Chr6 - View
Carya illinoinensis CiPaw.01G266400 3.2.1.142 - Limit dextrinase / R-enzyme Chr01 - View
Citrullus lanatus ClCG05G021340 Glycogen debranching enzyme CG_Chr05 + View
Cucumis melo MELO3C034031.2 pullulanase 1, chloroplastic chr10 + View
Corchorus olitorius COL.COLO4_09860 hypothetical protein AWUE01014278.1 - View
Carica papaya Cpa.g.sc53.156 supercontig_53 + View
Capsella rubella Carub.0006s0331 3.2.1.142//3.2.1.41 - Limit dextrinase / R-enzyme // Pullulanase / Pullulan 6-glucanohydrolase scaffold_6 + View
Cucumis sativus L. CsaV3_5G035900 Alpha-1,6-glucosidase, pullulanase-type protein chr5 - View
Daucus carota DCAR_019069 hypothetical protein DCARv2_Chr5 - View
Davidia involucrata Dinv31247 GWHABJS00000004 - View
Durio zibethinus Duzib114G0641 NW_019167926.1 + View
Erigeron canadensis ECA238G3613 Conyza_canadensis_scaffold:6 - View
Eucalyptus grandis Eucgr.G02746 Chr07 - View
Erythranthe guttata Migut.F01920 scaffold_6 - View
Eutrema salsugineum Thhalv10012585m.g 3.2.1.142 - Limit dextrinase / R-enzyme scaffold_2 + View
Fragaria x ananassa FAN10G3474 3.2.1.142 - Limit dextrinase / R-enzyme Fvb7-1 - View
Fragaria x ananassa FAN10G1668 3.2.1.41 - Pullulanase / Pullulan 6-glucanohydrolase Fvb7-1 - View
Fragaria x ananassa FAN03G1155 3.2.1.142//3.2.1.41 - Limit dextrinase / R-enzyme // Pullulanase / Pullulan 6-glucanohydrolase Fvb7-3 + View
Fragaria x ananassa FAN01G0990 3.2.1.142 - Limit dextrinase / R-enzyme Fvb7-4 + View
Fragaria x ananassa FAN06G0602 3.2.1.142//3.2.1.41 - Limit dextrinase / R-enzyme // Pullulanase / Pullulan 6-glucanohydrolase Fvb7-2 - View
Fragaria vesca FvH4_7g18370 3.2.1.142//3.2.1.41 - Limit dextrinase / R-enzyme // Pullulanase / Pullulan 6-glucanohydrolase Fvb7 - View
Glycine max Glyma.10G197000 3.2.1.142 - Limit dextrinase / R-enzyme Gm10 + View
Hydrangea macrophylla Hma1.2p1_0117F.1_g056390 Hma1.2p1_0117F.1 + View
Lotus japonicus Lj5g0009189 3.2.1.142 - Limit dextrinase / R-enzyme chr5 - View
Lonicera japonica Lj2C23T6 GWHAAZE00000002 + View
Lactuca sativa Lsat_1_v5_gn_2_103740 Lsat_1_v8_lg_2 + View
Malus domestica MD07G1166900 limit dextrinase Chr07 - View
Malus domestica MD01G1100100 limit dextrinase Chr01 - View
Manihot esculenta Manes.10G051700 Chromosome10 + View
Medicago truncatula Medtr1g090693 alpha-1,6-glucosidase, pullulanase-type protein chr1 + View
Nelumbo nucifera Nn6g35226 chr6 - View
Nicotiana tabacum Nitab4.5_0004987g0060 Alpha-1,6-glucosidases, pullulanase-type, C-terminal, Glycoside hydrolase, family 13, Immunoglobulin E-set, Immunoglobulin-like fold, Glycoside hydrolase, catalytic domain, Glycoside hydrolase, family 13, N-terminal, Glycoside hydrolase, superfamily Nitab4.5_0004987 + View
Olea europaea Oeu016301.1 scaffold1658 - View
Petunia axillaris Peaxi162Scf00982g00216 Pullulanase Peaxi162Scf00982 + View
Prunus persica Prupe.2G205800 Pp02 - View
Pisum sativum Psat6g172720 Domain of unknown function (DUF3372) chr6LG2 - View
Populus trichocarpa Potri.010G229300 3.2.1.142//3.2.1.41 - Limit dextrinase / R-enzyme // Pullulanase / Pullulan 6-glucanohydrolase Chr10 + View
Phaseolus vulgaris Phvul.007G139400 3.2.1.142 - Limit dextrinase / R-enzyme Chr07 + View
Quercus lobata QL08p053276 8 - View
Rosa chinensis RcHm_v2.0_Chr1g0362181 RcHm_v2.0_Chr1 - View
Rhododendron simsii Rhsim09G0146100 chr09 - View
Salvia bowleyana SalBow4G3289 GWHASIU00000008 + View
Salix brachista Sabra10G0177800 GWHAAZH00000010 + View
Simmondsia chinensis Sc06g0002110 GWHAASQ00000006 + View
Sechium edule Sed0020526 LG07 - View
Schrenkiella parvula Sp6g38370 3.2.1.142//3.2.1.41 - Limit dextrinase / R-enzyme // Pullulanase / Pullulan 6-glucanohydrolase ch6-6 - View
Solanum pennellii Sopen11g003910 Encodes an enzyme thought to be involved in the hydrolysis of the, #945, -1,6 linkages during starch degradation in seed endosperm. However, a knockout mutant of Arabidopsis lacking limit dextrinase has normal rates of starch degradation in the leaf at night, indicating that more than one isoamylases might be involved in this process. | limit dextrinase (LDA) | FUNCTIONS IN: limit dextrinase activity, pullulanase activity, alpha-amylase activity | INVOLVED IN: starch biosynthetic process, carbohydrate metabolic process, starch catabolic process | LOCATED IN: chloroplast | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Alpha-1,6-glucosidases, pullulanase-type , Immunoglobulin E-set , Glycoside hydrolase, family 13, N-terminal , Glycoside hydrolase, catalytic core , Glycoside hydrolase, subgroup, catalytic core , Glycosyl hydrolase, family 13, catalytic domain | BEST Arabidopsis thaliana protein match is: isoamylase 3 Spenn-ch11 - View
Trochodendron aralioides TAR369G0250 group18 + View
Theobroma cacao Thecc.10G087900 Limit dextrinase Chromosome_10 + View
Tarenaya hassleriana THA.LOC104816441 pullulanase 1%2C chloroplastic NW_010965775.1 + View
Trifolium pratense TPR.G37858 Tp57577_TGAC_v2_LG1 + View
Tripterygium wilfordii TWI38G1180 NC_052252.1 - View
Vaccinium macrocarpon vmacro10255 Similar to PU1: Pullulanase 1, chloroplastic (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0720G1989 CM024071.1 + View
Vitis vinifera GSVIVG01016183001 chr13 + View