Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold2G01026 scaffold2 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Actinidia chinensis Actinidia02933 Lachesis_group22 + View
Actinidia chinensis Actinidia23670 Lachesis_group3 - View
Avicennia marina MSTRG.275 ScioBoG_102831_HRSCAF_103044 + View
Avicennia marina MSTRG.8262 ScioBoG_102841_HRSCAF_103114 - View
Amaranthus hybridus Ah.10g036910 E3 ubiquitin-protein ligase RDUF2 (EC 2.3.2.27) (RING and DUF1117 domain-containing protein 2) (AtRDUF2) (RING-type E3 ubiquitin transferase RDUF2) AmaHy_arrow1_Scaffold_10 - View
Aquilegia oxysepala Aqoxy1G00892 CHR01 + View
Arabidopsis thaliana AT3G46620 zinc finger (C3HC4-type RING finger) family protein Encodes an ABA- and drought-induced RING-DUF1117 gene whose mutation results in hyposensitive phenotypes toward ABA in terms of germination rate and stomatal closure and markedly reduced tolerance to drought stress relative to wild-type plants. zinc finger (C3HC4-type RING finger) family protein%3B FUNCTIONS IN: zinc ion binding%3B INVOLVED IN: response to chitin%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%2C Protein of unknown function DUF1117 (InterPro:IPR010543)%3B BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT5G59550.1)%3B Has 8876 Blast hits to 8844 proteins in 271 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 2388%3B Fungi - 760%3B Plants - 4652%3B Viruses - 43%3B Other Eukaryotes - 1027 (source: NCBI BLink). Chr3 - View
Amborella trichopoda ATR0559G087 AmTr_v1.0_scaffold00012 + View
Brassica napus C03p26300 C03 - View
Beta vulgaris EL10Ac2g04720 PTHR22763//PTHR22763:SF42 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Chr2_EL10_PGA_scaffold6 + View
Camellia sinensis var. sinensis CSS0047000 PREDICTED: E3 ubiquitin-protein ligase RING1-like [Nelumbo nucifera] Chr1 - View
Cicer arietinum L. Ca_05878_v3 Ca_LG2_v3 + View
Corylus avellana Haze_17094 Similar to RHC2A: Probable E3 ubiquitin-protein ligase RHC2A (Arabidopsis thaliana OX%3D3702) 11 - View
Coffea canephora Cc02_g07560 Putative E3 ubiquitin-protein ligase RING1 chr2 + View
Carya illinoinensis CiPaw.02G185500 PTHR13683:SF347 - CYSTEINE-RICH PEPTIDE FAMILY PROTEIN Chr02 - View
Cucumis melo MELO3C023875.2 E3 ubiquitin-protein ligase RING1-like chr10 - View
Carica papaya Cpa.g.sc81.109 supercontig_81 + View
Chenopodium quinoa AUR62012121 RING1: E3 ubiquitin-protein ligase RING1 C_Quinoa_Scaffold_1995 - View
Chenopodium quinoa AUR62040715 RING1: E3 ubiquitin-protein ligase RING1 C_Quinoa_Scaffold_1465 + View
Davidia involucrata Dinv06765 GWHABJS00000004 - View
Davidia involucrata Dinv26034 GWHABJS00000009 + View
Durio zibethinus Duzib150G1533 NW_019167882.1 - View
Erigeron canadensis ECA232G3286 Conyza_canadensis_scaffold:2 + View
Erigeron canadensis ECA238G0972 Conyza_canadensis_scaffold:6 - View
Eucalyptus grandis Eucgr.J02036 Chr10 + View
Eucalyptus grandis Eucgr.G02948 Chr07 - View
Erythranthe guttata Migut.F00762 scaffold_6 + View
Fragaria x ananassa FAN03G0939 PTHR22763//PTHR22763:SF42 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Fvb7-3 + View
Fragaria x ananassa FAN25G0577 PTHR22763//PTHR22763:SF26 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Fvb3-1 + View
Fragaria x ananassa FAN10G1837 PTHR22763//PTHR22763:SF42 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Fvb7-1 - View
Fragaria x ananassa FAN01G2545 PF06547//PF13639 - Protein of unknown function (DUF1117) (DUF1117) // Ring finger domain (zf-RING_2) Fvb7-4 + View
Fragaria x ananassa FAN06G3449 PTHR22763//PTHR22763:SF42 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Fvb7-2 + View
Fragaria vesca FvH4_7g22850 PTHR22763//PTHR22763:SF42 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Fvb7 - View
Gossypium hirsutum Gohir.A10G221200 PTHR22763//PTHR22763:SF42 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED A10 - View
Gossypium hirsutum Gohir.D13G019600 PTHR22763//PTHR22763:SF42 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED D13 - View
Glycine max Glyma.14G067300 PTHR22763:SF5 - E3 UBIQUITIN-PROTEIN LIGASE CIP8 Gm14 + View
Glycine max Glyma.11G220400 PTHR22763//PTHR22763:SF42 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Gm11 - View
Glycine max Glyma.18G037000 PTHR22763//PTHR22763:SF42 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Gm18 + View
Glycine max Glyma.12G060700 PTHR22763//PTHR22763:SF42 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Gm12 + View
Gossypium raimondii Gorai.003G158600 Chr03 + View
Gossypium raimondii Gorai.011G267000 Chr11 - View
Gossypium raimondii Gorai.013G021800 Chr13 - View
Helianthus annuus HanXRQChr07g0201591 Probable RING-H2 finger C2A HanXRQChr07 - View
Lupinus albus Lalb_Chr17g0346311 PTHR22763//PTHR22763:SF26 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Lalb_Chr17 - View
Lupinus albus Lalb_Chr15g0084641 PTHR22763//PTHR22763:SF26 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Lalb_Chr15 + View
Lotus japonicus LjContig00141g0016226 PTHR22763//PTHR22763:SF42 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Contig00141 + View
Lactuca sativa Lsat_1_v5_gn_2_118200 PTHR22763//PTHR22763:SF26 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Lsat_1_v8_lg_2 + View
Lactuca sativa Lsat_1_v5_gn_8_15080 PTHR22763//PTHR22763:SF42 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Lsat_1_v8_lg_8 + View
Lactuca sativa Lsat_1_v5_gn_9_64961 Lsat_1_v8_lg_9 + View
Malus domestica MD01G1136700 RING-H2 finger C2A Chr01 - View
Malus domestica MD07G1201700 RING-H2 finger C2A Chr07 - View
Malus domestica MD03G1087100 zinc finger (C3HC4-type RING finger) family protein Chr03 + View
Manihot esculenta Manes.02G130000 Chromosome02 + View
Medicago truncatula Medtr5g080350 E3 ubiquitin-protein ligase RING1-like protein chr5 - View
Medicago truncatula Medtr4g064570 zinc finger (C3HC4-type RING finger) family protein chr4 - View
Punica granatum PGR142G3397 NC_045128.1 - View
Prunus persica Prupe.2G238300 PTHR22763//PTHR22763:SF42 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Pp02 - View
Prunus persica Prupe.6G071800 PTHR22763//PTHR22763:SF42 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Pp06 + View
Populus trichocarpa Potri.010G201300 PTHR22763//PTHR22763:SF42 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Chr10 + View
Phaseolus vulgaris Phvul.001G233700 PTHR22763//PTHR22763:SF26 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Chr01 - View
Quercus lobata QL08p060576 8 - View
Rosa chinensis RcHm_v2.0_Chr1g0368011 RcHm_v2.0_Chr1 - View
Salix brachista Sabra10G0155300 GWHAAZH00000010 + View
Simmondsia chinensis Sc10g0001740 GWHAASQ00000010 - View
Simmondsia chinensis Sc11g0007850 GWHAASQ00000011 + View
Sechium edule Sed0000942 LG07 - View
Solanum tuberosum PGSC0003DMG400002153 Zinc finger protein ST4.03ch06 + View
Theobroma cacao Thecc.10G037200 RING-H2 finger C2A Chromosome_10 - View
Tarenaya hassleriana THA.LOC104824283 probable E3 ubiquitin-protein ligase RHC2A NW_010966881.1 - View
Tripterygium wilfordii TWI38G0915 NC_052252.1 - View
Tripterygium wilfordii TWI15G0895 NC_052247.1 - View
Vigna mungo VMungo1383G3222 CM024070.1 - View
Vigna mungo VMungo0647G1692 CM024073.1 - View
Vitis vinifera GSVIVG01024920001 chr6 - View
Vitis vinifera GSVIVG01016510001 chr13 - View