Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold35G14023 scaffold35 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr8.1400 chr8 - View
Acer truncatum Atru.chr3.3151 chr3 - View
Actinidia chinensis Actinidia07268 Lachesis_group13 + View
Actinidia chinensis Actinidia07934 Lachesis_group0 + View
Actinidia chinensis Actinidia06172 Lachesis_group20 - View
Avicennia marina MSTRG.10390 ScioBoG_13798_HRSCAF_13862 + View
Avicennia marina MSTRG.26613 ScioBoG_52287_HRSCAF_52434 - View
Amaranthus hybridus Ah.08g210220 Probable CCR4-associated factor 1 homolog 9 (EC 3.1.13.4) AmaHy_arrow1_Scaffold_8 - View
Aquilegia oxysepala Aqoxy4G02691 CHR04 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.R63LGU PTHR10797//PTHR10797:SF10 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.12 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.F8EV2B PTHR10797 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT arahy.Tifrunner.gnm1.Arahy.06 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.5E2E13 K12581 - CCR4-NOT transcription complex subunit 7/8 (CNOT7_8, CAF1, POP2) arahy.Tifrunner.gnm1.Arahy.18 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.CSR0C2 PTHR10797//PTHR10797:SF10 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.02 - View
Brassica carinata BcaC03g13869 ChrC03 - View
Beta vulgaris EL10Ac7g16322 PTHR10797:SF3 - CCR4-ASSOCIATED FACTOR 1 HOMOLOG 11-RELATED Chr7_EL10_PGA_scaffold5 - View
Beta vulgaris EL10Ac7g16818 PTHR10797//PTHR10797:SF3 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT // CCR4-ASSOCIATED FACTOR 1 HOMOLOG 11-RELATED Chr7_EL10_PGA_scaffold5 - View
Camellia sinensis var. sinensis CSS0028008 putative CCR4-associated factor 1-11-like protein [Morus notabilis] Chr13 + View
Camellia sinensis var. sinensis CSS0028318 PREDICTED: probable CCR4-associated factor 1 homolog 9 [Vitis vinifera] Chr13 - View
Capsicum annuum CAN.G574.41 PGAv.1.6.scaffold574 - View
Cannabis sativa CANSAT64G0411 NC_044379.1 + View
Cicer arietinum L. Ca_09038_v3 Ca_LG3_v3 + View
Cicer arietinum L. Ca_11721_v3 Ca_LG4_v3 - View
Corylus avellana Haze_23334 Similar to CAF1-9: Probable CCR4-associated factor 1 homolog 9 (Arabidopsis thaliana OX%3D3702) 6 - View
Corylus avellana Haze_19676 Similar to CAF1-11: Probable CCR4-associated factor 1 homolog 11 (Arabidopsis thaliana OX%3D3702) 10 + View
Coffea canephora Cc06_g06320 Probable CCR4-associated factor 1 homolog 9 chr6 + View
Coffea canephora Cc01_g08640 Probable CCR4-associated factor 1 homolog 11 chr1 - View
Citrus clementina Ciclev10012581m.g scaffold_6 - View
Ceratophyllum demersum CDE06G2282 4 - View
Carpinus fangiana Cfa009973 Cfa04 - View
Carpinus fangiana Cfa016665 Cfa07 + View
Carya illinoinensis CiPaw.09G018400 PTHR10797//PTHR10797:SF10 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT // SUBFAMILY NOT NAMED Chr09 + View
Carya illinoinensis CiPaw.13G132100 PTHR10797//PTHR10797:SF3 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT // CCR4-ASSOCIATED FACTOR 1 HOMOLOG 11-RELATED Chr13 - View
Carya illinoinensis CiPaw.14G096200 PTHR10797//PTHR10797:SF3 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT // CCR4-ASSOCIATED FACTOR 1 HOMOLOG 11-RELATED Chr14 + View
Citrullus lanatus ClCG02G022360 CCR4-NOT transcription complex family protein CG_Chr02 + View
Cucumis melo MELO3C014512.2 Ribonuclease CAF1 chr05 - View
Chenopodium quinoa AUR62037033 CAF1-9: Probable CCR4-associated factor 1 homolog 9 C_Quinoa_Scaffold_1847 + View
Chenopodium quinoa AUR62006265 CAF1-9: Probable CCR4-associated factor 1 homolog 9 C_Quinoa_Scaffold_1001 + View
Daucus carota DCAR_013427 hypothetical protein DCARv2_Chr4 - View
Davidia involucrata Dinv31741 GWHABJS00000015 + View
Durio zibethinus Duzib128G0611 NW_019168481.1 - View
Durio zibethinus Duzib168G0468 NW_019168159.1 + View
Durio zibethinus Duzib170G1115 NW_019167871.1 - View
Durio zibethinus Duzib106G0622 NW_019168492.1 - View
Durio zibethinus Duzib093G0239 NW_019167937.1 - View
Eucalyptus grandis Eucgr.J00535 Chr10 + View
Erythranthe guttata Migut.N02465 scaffold_14 - View
Erythranthe guttata Migut.L01814 scaffold_12 - View
Erythranthe guttata Migut.J00680 scaffold_10 + View
Eutrema salsugineum Thhalv10010623m.g PTHR10797:SF3 - CCR4-ASSOCIATED FACTOR 1 HOMOLOG 11-RELATED scaffold_16 + View
Fragaria x ananassa FAN02G2117 PTHR10797//PTHR10797:SF10 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT // SUBFAMILY NOT NAMED Fvb6-4 + View
Fragaria x ananassa FAN25G0932 PTHR10797:SF3 - CCR4-ASSOCIATED FACTOR 1 HOMOLOG 11-RELATED Fvb3-1 + View
Fragaria x ananassa FAN09G2742 PTHR10797//PTHR10797:SF10 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT // SUBFAMILY NOT NAMED Fvb6-2 + View
Fragaria x ananassa FAN05G1513 PTHR10797//PTHR10797:SF10 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT // SUBFAMILY NOT NAMED Fvb6-3 + View
Fragaria x ananassa FAN14G3172 PTHR10797//PTHR10797:SF10 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT // SUBFAMILY NOT NAMED Fvb6-1 - View
Fragaria x ananassa FAN05G2410 PTHR10797//PTHR10797:SF10 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT // SUBFAMILY NOT NAMED Fvb6-3 + View
Fragaria vesca FvH4_6g19860 PTHR10797//PTHR10797:SF10 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT // SUBFAMILY NOT NAMED Fvb6 + View
Gossypium hirsutum Gohir.D09G097301 K12581 - CCR4-NOT transcription complex subunit 7/8 (CNOT7_8, CAF1, POP2) D09 + View
Gossypium hirsutum Gohir.A07G111801 PTHR10797:SF3 - CCR4-ASSOCIATED FACTOR 1 HOMOLOG 11-RELATED A07 + View
Gossypium hirsutum Gohir.D11G336900 PTHR10797//PTHR10797:SF10 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT // SUBFAMILY NOT NAMED D11 - View
Gossypium hirsutum Gohir.A09G097600 K12581 - CCR4-NOT transcription complex subunit 7/8 (CNOT7_8, CAF1, POP2) A09 + View
Gossypium hirsutum Gohir.A08G007000 PTHR10797:SF3 - CCR4-ASSOCIATED FACTOR 1 HOMOLOG 11-RELATED A08 + View
Gossypium hirsutum Gohir.D08G017100 K12581 - CCR4-NOT transcription complex subunit 7/8 (CNOT7_8, CAF1, POP2) D08 + View
Gossypium hirsutum Gohir.D07G115400 PTHR10797:SF3 - CCR4-ASSOCIATED FACTOR 1 HOMOLOG 11-RELATED D07 + View
Glycine max Glyma.19G197600 PTHR10797//PTHR10797:SF10 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT // SUBFAMILY NOT NAMED Gm19 + View
Glycine max Glyma.12G093100 PTHR10797:SF3 - CCR4-ASSOCIATED FACTOR 1 HOMOLOG 11-RELATED Gm12 + View
Glycine max Glyma.13G314100 PTHR10797:SF3 - CCR4-ASSOCIATED FACTOR 1 HOMOLOG 11-RELATED Gm13 - View
Glycine max Glyma.03G200000 PTHR10797//PTHR10797:SF10 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT // SUBFAMILY NOT NAMED Gm03 + View
Glycine max Glyma.12G187400 PTHR10797:SF3 - CCR4-ASSOCIATED FACTOR 1 HOMOLOG 11-RELATED Gm12 + View
Gossypium raimondii Gorai.006G114000 Chr06 + View
Gossypium raimondii Gorai.004G011500 Chr04 + View
Gossypium raimondii Gorai.001G123600 Chr01 + View
Gossypium raimondii Gorai.007G366900 Chr07 - View
Hydrangea macrophylla Hma1.2p1_0064F.1_g034880 Hma1.2p1_0064F.1 - View
Lupinus albus Lalb_Chr24g0393431 K12581 - CCR4-NOT transcription complex subunit 7/8 (CNOT7_8, CAF1, POP2) Lalb_Chr24 - View
Lotus japonicus Lj3g0028214 K12581 - CCR4-NOT transcription complex subunit 7/8 (CNOT7_8, CAF1, POP2) chr3 + View
Lotus japonicus Lj5g0002184 PTHR10797//PTHR10797:SF10 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT // SUBFAMILY NOT NAMED chr5 + View
Lotus japonicus Lj1g0018246 K12581 - CCR4-NOT transcription complex subunit 7/8 (CNOT7_8, CAF1, POP2) chr1 - View
Lonicera japonica Lj2P973T12 GWHAAZE00000002 + View
Malus domestica MD12G1034100 Polynucleotidyl transferase Chr12 + View
Manihot esculenta Manes.08G030900 Chromosome08 + View
Manihot esculenta Manes.11G165000 Chromosome11 + View
Manihot esculenta Manes.09G049000 Chromosome09 - View
Nelumbo nucifera Nn2g14255 chr2 + View
Nelumbo nucifera Nn6g34770 chr6 - View
Nicotiana tabacum Nitab4.5_0000020g0410 Ribonuclease CAF1, Ribonuclease H-like domain Nitab4.5_0000020 - View
Petunia axillaris Peaxi162Scf00419g00024 CCR4-NOT transcription complex subunit 8 Peaxi162Scf00419 + View
Punica granatum PGR119G0422 NC_045132.1 - View
Punica granatum PGR102G0775 NC_045129.1 - View
Punica granatum PGR004G2104 NC_045131.1 - View
Prunus persica Prupe.7G098700 PTHR10797//PTHR10797:SF10 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT // SUBFAMILY NOT NAMED Pp07 - View
Papaver somniferum PSO384G4834 NC_039368.1 + View
Populus trichocarpa Potri.016G073000 PTHR10797//PTHR10797:SF10 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT // SUBFAMILY NOT NAMED Chr16 - View
Populus trichocarpa Potri.004G200400 PTHR10797:SF3 - CCR4-ASSOCIATED FACTOR 1 HOMOLOG 11-RELATED Chr04 + View
Populus trichocarpa Potri.006G205600 PTHR10797//PTHR10797:SF10 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT // SUBFAMILY NOT NAMED Chr06 - View
Populus trichocarpa Potri.009G161500 PTHR10797:SF3 - CCR4-ASSOCIATED FACTOR 1 HOMOLOG 11-RELATED Chr09 + View
Phaseolus vulgaris Phvul.001G193900 PTHR10797//PTHR10797:SF10 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT // SUBFAMILY NOT NAMED Chr01 + View
Phaseolus vulgaris Phvul.011G097400 Chr11 + View
Phaseolus vulgaris Phvul.005G121100 PTHR10797:SF3 - CCR4-ASSOCIATED FACTOR 1 HOMOLOG 11-RELATED Chr05 - View
Quercus lobata QL07p037555 7 - View
Rosa chinensis RcHm_v2.0_Chr3g0475261 RcHm_v2.0_Chr3 + View
Rhododendron simsii Rhsim03G0067400 chr03 - View
Rhododendron simsii Rhsim01G0202300 chr01 - View
Salix brachista Sabra06G0158600 GWHAAZH00000006 - View
Salix brachista Sabra09G0126200 GWHAAZH00000009 + View
Salix brachista Sabra16G0075900 GWHAAZH00000016 - View
Salix brachista Sabra04G0135600 GWHAAZH00000004 + View
Simmondsia chinensis Sc02g0000510 GWHAASQ00000002 + View
Simmondsia chinensis Sc21g0006910 GWHAASQ00000021 - View
Solanum lycopersicum Solyc01g007840.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein (AHRD V3.3 *** A0A2U1M9A7_ARTAN) SL4.0ch01 - View
Solanum pennellii Sopen11g027490 Polynucleotidyl transferase, ribonuclease H-like superfamily protein | FUNCTIONS IN: ribonuclease activity, nucleic acid binding | INVOLVED IN: RNA modification | LOCATED IN: nucleus | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: Ribonuclease CAF1 , Polynucleotidyl transferase, ribonuclease H fold | BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein Spenn-ch11 + View
Solanum tuberosum PGSC0003DMG400005899 CCR4-associated factor ST4.03ch06 - View
Solanum tuberosum PGSC0003DMG400019618 CCR4-associated factor ST4.03ch11 + View
Solanum tuberosum PGSC0003DMG400016383 Ccr4-associated factor ST4.03ch01 - View
Trochodendron aralioides TAR636G2653 group1 + View
Trochodendron aralioides TAR633G2586 group2 + View
Trochodendron aralioides TAR369G0341 group18 + View
Trochodendron aralioides TAR623G0809 group7 - View
Theobroma cacao Thecc.09G276600 Polynucleotidyl transferase Chromosome_9 - View
Theobroma cacao Thecc.05G100400 Polynucleotidyl transferase Chromosome_5 + View
Trifolium pratense TPR.G23360 Tp57577_TGAC_v2_LG6 - View
Trifolium pratense TPR.G8726 Tp57577_TGAC_v2_scaf_514 - View
Tripterygium wilfordii TWI77G0192 NC_052236.1 - View
Tripterygium wilfordii TWI74G1257 NC_052234.1 + View
Tripterygium wilfordii TWI79G0942 NC_052238.1 + View
Utricularia gibba unitig_8.g4974 unitig_8 + View
Vaccinium macrocarpon vmacro07459 Similar to CAF1-11: Probable CCR4-associated factor 1 homolog 11 (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1127G0540 CM024076.1 + View
Vigna mungo VMungo1080G1286 CM024079.1 + View
Vigna mungo VMungo1383G3672 CM024070.1 + View
Vanilla planifolia HPP92_013819 Polynucleotidyl transferase, ribonuclease H-like superfamily protein *** CM028155.1 + View
Vitis vinifera GSVIVG01036062001 chr6 + View