Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold113G31694 scaffold113 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G8840 LG-3 + View
Actinidia chinensis Actinidia34144 Lachesis_group3 - View
Actinidia chinensis Actinidia20869 Lachesis_group6 + View
Avicennia marina MSTRG.78 ScioBoG_102831_HRSCAF_103044 - View
Amaranthus hybridus Ah.13g069040 rRNA 2'-O-methyltransferase fibrillarin 2 (AtFib2) (EC 2.1.1.-) (Fibrillarin-like protein 2) (Histone-glutamine methyltransferase) AmaHy_arrow1_Scaffold_13 + View
Amaranthus hybridus Ah.07g206770 rRNA 2'-O-methyltransferase fibrillarin 1 (AtFbr1) (AtFib1) (EC 2.1.1.-) (Fibrillarin-like protein 1) (Histone-glutamine methyltransferase) (SKP1-interacting partner 7) AmaHy_arrow1_Scaffold_7 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.4A0KTI K14563 - rRNA 2'-O-methyltransferase fibrillarin (NOP1, FBL) arahy.Tifrunner.gnm1.Arahy.05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.FGM9QK K14563 - rRNA 2'-O-methyltransferase fibrillarin (NOP1, FBL) arahy.Tifrunner.gnm1.Arahy.15 + View
Arabidopsis thaliana AT5G52470 fibrillarin 1 encodes a fibrillarin%2C a key nucleolar protein in eukaryotes which associates with box C/D small nucleolar RNAs (snoRNAs) directing 2'-O-ribose methylation of the rRNA. This gene also encodes a novel box C/D snoRNA%2C U60.1f in its fifth intron that accumulates in seedlings and that their targeted residue on the 25 S rRNA is methylated. fibrillarin 1 (FIB1)%3B FUNCTIONS IN: snoRNA binding%3B INVOLVED IN: RNA methylation%2C rRNA processing%3B LOCATED IN: nucleolus%2C membrane%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Fibrillarin (InterPro:IPR000692)%3B BEST Arabidopsis thaliana protein match is: fibrillarin 2 (TAIR:AT4G25630.1)%3B Has 20161 Blast hits to 7736 proteins in 898 species: Archae - 267%3B Bacteria - 4851%3B Metazoa - 6936%3B Fungi - 1342%3B Plants - 4220%3B Viruses - 452%3B Other Eukaryotes - 2093 (source: NCBI BLink). Chr5 + View
Brassica carinata BcaB05g21962 ChrB05 + View
Brassica carinata BcaC03g14527 ChrC03 - View
Brassica carinata BcaB08g35602 ChrB08 + View
Brassica carinata BcaC04g20584 ChrC04 - View
Brassica napus A02p11790 A02 - View
Brassica napus C02p19620 C02 - View
Brassica rapa BraA02t06244Z A02 - View
Beta vulgaris EL10Ac3g05445 K14563 - rRNA 2'-O-methyltransferase fibrillarin (NOP1, FBL) Chr3_EL10_PGA_scaffold7 - View
Camellia sinensis var. sinensis CSS0045929 PREDICTED: mediator of RNA polymerase II transcription subunit 36a-like [Sesamum indicum] Chr7 + View
Corylus avellana Haze_00029 Similar to FIB1: rRNA 2'-O-methyltransferase fibrillarin 1 (Arabidopsis thaliana OX%3D3702) 1 + View
Coffea canephora Cc02_g02560 rRNA 2'-O-methyltransferase fibrillarin 1 chr2 - View
Cardamine hirsuta CARHR265460 rRNA 2'-O-methyltransferase fibrillarin, putative Chr8 + View
Citrullus lanatus ClCG05G008250 rRNA 2'-O-methyltransferase fibrillarin 2 CG_Chr05 + View
Cucumis melo MELO3C006945.2 mediator of RNA polymerase II transcription subunit 36a-like chr06 - View
Carica papaya Cpa.g.sc107.89 supercontig_107 + View
Chenopodium quinoa AUR62021142 MED36A: Mediator of RNA polymerase II transcription subunit 36a C_Quinoa_Scaffold_1783 - View
Chenopodium quinoa AUR62031396 MED36A: Mediator of RNA polymerase II transcription subunit 36a C_Quinoa_Scaffold_2963 + View
Capsella rubella Carub.0008s1258 K14563 - rRNA 2'-O-methyltransferase fibrillarin (NOP1, FBL) scaffold_8 + View
Cucumis sativus L. CsaV3_3G017360 rRNA 2'-O-methyltransferase fibrillarin chr3 + View
Daucus carota DCAR_010668 hypothetical protein DCARv2_Chr3 - View
Daucus carota DCAR_014514 hypothetical protein DCARv2_Chr4 - View
Davidia involucrata Dinv35236 GWHABJS00000009 - View
Davidia involucrata Dinv28401 GWHABJS00000004 - View
Durio zibethinus Duzib205G0570 NW_019168381.1 + View
Durio zibethinus Duzib084G0884 NW_019167827.1 - View
Erigeron canadensis ECA232G0108 Conyza_canadensis_scaffold:2 - View
Erigeron canadensis ECA233G1830 Conyza_canadensis_scaffold:1 - View
Eucalyptus grandis Eucgr.K00288 Chr11 + View
Erythranthe guttata Migut.F01095 scaffold_6 - View
Eutrema salsugineum Thhalv10015376m.g K14563 - rRNA 2'-O-methyltransferase fibrillarin (NOP1, FBL) scaffold_2 - View
Fragaria x ananassa FAN06G0767 K14563 - rRNA 2'-O-methyltransferase fibrillarin (NOP1, FBL) Fvb7-2 + View
Fragaria x ananassa FAN10G1316 K14563 - rRNA 2'-O-methyltransferase fibrillarin (NOP1, FBL) Fvb7-1 + View
Fragaria x ananassa FAN01G2891 K14563 - rRNA 2'-O-methyltransferase fibrillarin (NOP1, FBL) Fvb7-4 - View
Fragaria x ananassa FAN03G2750 K14563 - rRNA 2'-O-methyltransferase fibrillarin (NOP1, FBL) Fvb7-3 - View
Fragaria x ananassa FAN10G3509 K14563 - rRNA 2'-O-methyltransferase fibrillarin (NOP1, FBL) Fvb7-1 + View
Gossypium hirsutum Gohir.D08G110000 K14563 - rRNA 2'-O-methyltransferase fibrillarin (NOP1, FBL) D08 + View
Gossypium hirsutum Gohir.A11G011500 K14563 - rRNA 2'-O-methyltransferase fibrillarin (NOP1, FBL) A11 + View
Gossypium hirsutum Gohir.A08G098400 K14563 - rRNA 2'-O-methyltransferase fibrillarin (NOP1, FBL) A08 - View
Gossypium hirsutum Gohir.D11G010700 K14563 - rRNA 2'-O-methyltransferase fibrillarin (NOP1, FBL) D11 + View
Gossypium raimondii Gorai.007G012200 Chr07 + View
Gossypium raimondii Gorai.004G117600 Chr04 - View
Hydrangea macrophylla Hma1.2p1_0327F.1_g126270 Hma1.2p1_0327F.1 + View
Lotus japonicus Lj2g0020769 K14563 - rRNA 2'-O-methyltransferase fibrillarin (NOP1, FBL) chr2 + View
Lonicera japonica Lj8C19T10 GWHAAZE00000008 - View
Lonicera japonica Lj1C1003T2 GWHAAZE00000001 + View
Lactuca sativa Lsat_1_v5_gn_9_57541 K14563 - rRNA 2'-O-methyltransferase fibrillarin (NOP1, FBL) Lsat_1_v8_lg_9 - View
Lactuca sativa Lsat_1_v5_gn_8_6881 K14563 - rRNA 2'-O-methyltransferase fibrillarin (NOP1, FBL) Lsat_1_v8_lg_8 + View
Malus domestica MD01G1206000 fibrillarin 2 Chr01 + View
Malus domestica MD07G1276800 fibrillarin 2 Chr07 + View
Manihot esculenta Manes.06G151200 Chromosome06 + View
Manihot esculenta Manes.14G023700 Chromosome14 - View
Punica granatum PGR042G2966 NC_045130.1 - View
Quercus lobata QL09p013235 9 + View
Rhododendron simsii Rhsim03G0189800 chr03 - View
Rhododendron simsii Rhsim09G0199600 chr09 + View
Simmondsia chinensis Sc25g0000600 GWHAASQ00000025 - View
Sechium edule Sed0005806 LG13 + View
Sechium edule Sed0008349 LG07 - View
Solanum lycopersicum Solyc03g025270.3 Fibrillarin (AHRD V3.3 *** A0A200R7Z1_9MAGN) SL4.0ch03 - View
Schrenkiella parvula Sp6g14680 K14563 - rRNA 2'-O-methyltransferase fibrillarin (NOP1, FBL) ch6-6 + View
Solanum tuberosum PGSC0003DMG400010119 Fibrillarin homolog ST4.03ch03 + View
Selenicereus undatus Hund04777 Scaffold_19641 + View
Trochodendron aralioides TAR629G0135 group0 + View
Trochodendron aralioides TAR375G0954 group15 + View
Theobroma cacao Thecc.03G182100 Chromosome_3 + View
Tarenaya hassleriana THA.LOC104800263 probable mediator of RNA polymerase II transcription subunit 36b NW_010969135.1 + View
Tarenaya hassleriana THA.LOC104811968 mediator of RNA polymerase II transcription subunit 36a NW_010965372.1 - View
Tripterygium wilfordii TWI23G0887 NC_052239.1 - View
Vaccinium macrocarpon vmacro06641 Similar to MED36A: Mediator of RNA polymerase II transcription subunit 36a (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01028887001 chr16 + View